RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 POGKQ9P215 609 aa14.8□□□□□ -0.04
NCKIPSD-202ENST00000413374 PHLPP1O60346 1717 aa14.8□□□□□ -0.04
NCKIPSD-202ENST00000413374 NEUROD1Q13562 356 aa14.79□□□□□ -0.04
NCKIPSD-202ENST00000413374 ASXL1Q8IXJ9 1541 aa14.79□□□□□ -0.04
NCKIPSD-202ENST00000413374 SIN3AQ96ST3 1273 aa14.79□□□□□ -0.04
NCKIPSD-202ENST00000413374 NRXN1Q9ULB1 1477 aa14.78□□□□□ -0.04
NCKIPSD-202ENST00000413374 XPCQ01831 940 aaPredicted RBP14.78□□□□□ -0.04
NCKIPSD-202ENST00000413374 POTEAQ6S8J7 498 aa14.78□□□□□ -0.04
NCKIPSD-202ENST00000413374 SIRT1Q96EB6 747 aa14.78□□□□□ -0.04
NCKIPSD-202ENST00000413374 MYOM2P54296 1465 aa14.77□□□□□ -0.04
NCKIPSD-202ENST00000413374 FOXO3O43524 673 aa14.77□□□□□ -0.05
NCKIPSD-202ENST00000413374 TECPR2O15040 1411 aa14.76□□□□□ -0.05
NCKIPSD-202ENST00000413374 PRAG1Q86YV5 1406 aa14.76□□□□□ -0.05
NCKIPSD-202ENST00000413374 SPATA31A6Q5VVP1 1343 aa14.76□□□□□ -0.05
NCKIPSD-202ENST00000413374 NALCNQ8IZF0 1738 aa14.76□□□□□ -0.05
NCKIPSD-202ENST00000413374 IFT172Q9UG01 1749 aa14.76□□□□□ -0.05
NCKIPSD-202ENST00000413374 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
NCKIPSD-202ENST00000413374 COL16A1Q07092 1604 aaPredicted RBP14.75□□□□□ -0.05
NCKIPSD-202ENST00000413374 STAC3Q96MF2 364 aa14.75□□□□□ -0.05
NCKIPSD-202ENST00000413374 AHDC1Q5TGY3 1603 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-202ENST00000413374 MINK1Q8N4C8 1332 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-202ENST00000413374 TRIM26Q12899 539 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-202ENST00000413374 SOS2Q07890 1332 aaPredicted RBP14.72□□□□□ -0.05
NCKIPSD-202ENST00000413374 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
NCKIPSD-202ENST00000413374 ADAMTS2O95450 1211 aa14.72□□□□□ -0.05
NCKIPSD-202ENST00000413374 NBPF1Q3BBV0 1214 aa14.72□□□□□ -0.05
NCKIPSD-202ENST00000413374 L3MBTL2Q969R5 705 aa14.72□□□□□ -0.05
NCKIPSD-202ENST00000413374 LRP6O75581 1613 aa14.72□□□□□ -0.05
NCKIPSD-202ENST00000413374 PMFBP1Q8TBY8 1022 aa14.71□□□□□ -0.05
NCKIPSD-202ENST00000413374 C8orf37Q96NL8 207 aa14.71□□□□□ -0.05
NCKIPSD-202ENST00000413374 PNPLA6Q8IY17 1366 aa14.71□□□□□ -0.06
NCKIPSD-202ENST00000413374 NPHP3Q7Z494 1330 aa14.7□□□□□ -0.06
NCKIPSD-202ENST00000413374 KRT28Q7Z3Y7 464 aa14.7□□□□□ -0.06
NCKIPSD-202ENST00000413374 PHF8Q9UPP1 1060 aa14.69□□□□□ -0.06
NCKIPSD-202ENST00000413374 ADGRB1O14514 1584 aa14.68□□□□□ -0.06
NCKIPSD-202ENST00000413374 PSME1Q06323 249 aa14.67□□□□□ -0.06
NCKIPSD-202ENST00000413374 ZNF772Q68DY9 489 aaPredicted RBP14.67□□□□□ -0.06
NCKIPSD-202ENST00000413374 NGLY1Q96IV0 654 aa14.67□□□□□ -0.06
NCKIPSD-202ENST00000413374 CDC42BPGQ6DT37 1551 aa14.67□□□□□ -0.06
NCKIPSD-202ENST00000413374 AFF2P51816 1311 aa14.66□□□□□ -0.06
NCKIPSD-202ENST00000413374 WASLO00401 505 aaPredicted RBP14.66□□□□□ -0.06
NCKIPSD-202ENST00000413374 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
NCKIPSD-202ENST00000413374 NHSL1Q5SYE7 1610 aa14.65□□□□□ -0.06
NCKIPSD-202ENST00000413374 LAMC1P11047 1609 aa14.64□□□□□ -0.07
NCKIPSD-202ENST00000413374 DLC1Q96QB1 1528 aa14.64□□□□□ -0.07
NCKIPSD-202ENST00000413374 PRR36Q9H6K5 1346 aa14.64□□□□□ -0.07
NCKIPSD-202ENST00000413374 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
NCKIPSD-202ENST00000413374 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
NCKIPSD-202ENST00000413374 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
NCKIPSD-202ENST00000413374 SPATA31A3Q5VYP0 1347 aa14.63□□□□□ -0.07
NCKIPSD-202ENST00000413374 RXRBP28702 533 aa14.62□□□□□ -0.07
NCKIPSD-202ENST00000413374 CABLES1Q8TDN4 633 aa14.62□□□□□ -0.07
NCKIPSD-202ENST00000413374 SHPRHQ149N8 1683 aa14.61□□□□□ -0.07
NCKIPSD-202ENST00000413374 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
NCKIPSD-202ENST00000413374 NUDT16Q96DE0 195 aaKnown RBP14.61□□□□□ -0.07
NCKIPSD-202ENST00000413374 PXDNQ92626 1479 aa14.61□□□□□ -0.07
NCKIPSD-202ENST00000413374 HAP1P54257 671 aaPredicted RBP14.6□□□□□ -0.07
NCKIPSD-202ENST00000413374 NBPF8Q3BBV2 869 aa14.6□□□□□ -0.07
NCKIPSD-202ENST00000413374 USP21Q9UK80 565 aa14.6□□□□□ -0.07
NCKIPSD-202ENST00000413374 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
NCKIPSD-202ENST00000413374 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.07
NCKIPSD-202ENST00000413374 CABP2Q9NPB3 220 aa14.58□□□□□ -0.08
NCKIPSD-202ENST00000413374 SRPK2P78362 688 aaKnown RBP14.57□□□□□ -0.08
NCKIPSD-202ENST00000413374 CENPJQ9HC77 1338 aaPredicted RBP14.57□□□□□ -0.08
NCKIPSD-202ENST00000413374 ANKARQ7Z5J8 1434 aa14.57□□□□□ -0.08
NCKIPSD-202ENST00000413374 GPRASP1Q5JY77 1395 aa14.56□□□□□ -0.08
NCKIPSD-202ENST00000413374 FNBP4Q8N3X1 1017 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-202ENST00000413374 PCGF6Q9BYE7 350 aa14.55□□□□□ -0.08
NCKIPSD-202ENST00000413374 ROCK2O75116 1388 aaKnown RBP14.55□□□□□ -0.08
NCKIPSD-202ENST00000413374 EIF3AQ14152 1382 aaKnown RBP14.55□□□□□ -0.08
NCKIPSD-202ENST00000413374 RBM6P78332 1123 aaKnown RBP14.54□□□□□ -0.08
NCKIPSD-202ENST00000413374 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
NCKIPSD-202ENST00000413374 TONSLQ96HA7 1378 aa14.54□□□□□ -0.08
NCKIPSD-202ENST00000413374 TNS3Q68CZ2 1445 aa14.53□□□□□ -0.08
NCKIPSD-202ENST00000413374 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
NCKIPSD-202ENST00000413374 NUTM2GQ5VZR2 741 aa14.53□□□□□ -0.08
NCKIPSD-202ENST00000413374 TRPC5Q9UL62 973 aaPredicted RBP14.53□□□□□ -0.08
NCKIPSD-202ENST00000413374 USP32Q8NFA0 1604 aa14.52□□□□□ -0.08
NCKIPSD-202ENST00000413374 TULP4Q9NRJ4 1543 aa14.52□□□□□ -0.08
NCKIPSD-202ENST00000413374 ACEP12821 1306 aa14.52□□□□□ -0.08
NCKIPSD-202ENST00000413374 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.09
NCKIPSD-202ENST00000413374 RGPD8O14715 1765 aaPredicted RBP14.52□□□□□ -0.09
NCKIPSD-202ENST00000413374 ADGRB2O60241 1585 aa14.51□□□□□ -0.09
NCKIPSD-202ENST00000413374 ARHGEF10O15013 1369 aa14.5□□□□□ -0.09
NCKIPSD-202ENST00000413374 KIF1AQ12756 1690 aa14.5□□□□□ -0.09
NCKIPSD-202ENST00000413374 FAM83GA6ND36 823 aa14.5□□□□□ -0.09
NCKIPSD-202ENST00000413374 CABP1Q9NZU7 370 aa14.5□□□□□ -0.09
NCKIPSD-202ENST00000413374 ARHGEF28Q8N1W1 1705 aaKnown RBP14.49□□□□□ -0.09
NCKIPSD-202ENST00000413374 PLEKHG3A1L390 1219 aa14.49□□□□□ -0.09
NCKIPSD-202ENST00000413374 UNC5CLQ8IV45 518 aa14.49□□□□□ -0.09
NCKIPSD-202ENST00000413374 ATP7BP35670 1465 aa14.49□□□□□ -0.09
NCKIPSD-202ENST00000413374 GJD4Q96KN9 370 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-202ENST00000413374 CCDC9Q9Y3X0 531 aaKnown RBP14.48□□□□□ -0.09
NCKIPSD-202ENST00000413374 KIAA1210Q9ULL0 1709 aa14.48□□□□□ -0.09
NCKIPSD-202ENST00000413374 COL22A1Q8NFW1 1626 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-202ENST00000413374 EVC2Q86UK5 1308 aa14.47□□□□□ -0.09
NCKIPSD-202ENST00000413374 BCL9LQ86UU0 1499 aa14.47□□□□□ -0.09
NCKIPSD-202ENST00000413374 ABTB2Q8N961 1025 aa14.46□□□□□ -0.09
NCKIPSD-202ENST00000413374 UPF1Q92900 1129 aaKnown RBP eCLIP14.46□□□□□ -0.09
NCKIPSD-202ENST00000413374 PPIP5K1Q6PFW1 1433 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms