RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 PTGER2P43116 358 aa12□□□□□ -0.49
CPSF7-203ENST00000413184 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
CPSF7-203ENST00000413184 JMYQ8N9B5 988 aa12□□□□□ -0.49
CPSF7-203ENST00000413184 TBX22Q9Y458 520 aa12□□□□□ -0.49
CPSF7-203ENST00000413184 LAMC1P11047 1609 aa12□□□□□ -0.49
CPSF7-203ENST00000413184 LRRIQ1Q96JM4 1722 aa12□□□□□ -0.49
CPSF7-203ENST00000413184 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
CPSF7-203ENST00000413184 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
CPSF7-203ENST00000413184 PLEKHG1Q9ULL1 1385 aa11.99□□□□□ -0.49
CPSF7-203ENST00000413184 RPRD2Q5VT52 1461 aaKnown RBP11.99□□□□□ -0.49
CPSF7-203ENST00000413184 ADGRB3O60242 1522 aa11.99□□□□□ -0.49
CPSF7-203ENST00000413184 PCNTO95613 3336 aa11.98□□□□□ -0.49
CPSF7-203ENST00000413184 CASZ1Q86V15 1759 aa11.98□□□□□ -0.49
CPSF7-203ENST00000413184 ZNF526Q8TF50 670 aaPredicted RBP11.98□□□□□ -0.49
CPSF7-203ENST00000413184 KLRG1Q96E93 195 aa11.98□□□□□ -0.49
CPSF7-203ENST00000413184 GOLGB1Q14789 3259 aaKnown RBP11.97□□□□□ -0.49
CPSF7-203ENST00000413184 IDI1Q13907 227 aa11.96□□□□□ -0.49
CPSF7-203ENST00000413184 TMEM131LA2VDJ0 1609 aa11.96□□□□□ -0.5
CPSF7-203ENST00000413184 AMOTL2Q9Y2J4 779 aa11.95□□□□□ -0.5
CPSF7-203ENST00000413184 TRPM2O94759 1503 aa11.95□□□□□ -0.5
CPSF7-203ENST00000413184 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
CPSF7-203ENST00000413184 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
CPSF7-203ENST00000413184 PIK3R4Q99570 1358 aa11.93□□□□□ -0.5
CPSF7-203ENST00000413184 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
CPSF7-203ENST00000413184 PDGFDQ9GZP0 370 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-203ENST00000413184 C1orf167Q5SNV9 1468 aa11.93□□□□□ -0.5
CPSF7-203ENST00000413184 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
CPSF7-203ENST00000413184 NOS1P29475 1434 aa11.92□□□□□ -0.5
CPSF7-203ENST00000413184 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
CPSF7-203ENST00000413184 HDGFP51858 240 aaKnown RBP11.91□□□□□ -0.5
CPSF7-203ENST00000413184 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
CPSF7-203ENST00000413184 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
CPSF7-203ENST00000413184 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
CPSF7-203ENST00000413184 ZNF644Q9H582 1327 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-203ENST00000413184 MLLT1Q03111 559 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-203ENST00000413184 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
CPSF7-203ENST00000413184 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
CPSF7-203ENST00000413184 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
CPSF7-203ENST00000413184 ARXQ96QS3 562 aa11.89□□□□□ -0.51
CPSF7-203ENST00000413184 MTUS2Q5JR59 1369 aa11.89□□□□□ -0.51
CPSF7-203ENST00000413184 CCNB3Q8WWL7 1395 aa11.89□□□□□ -0.51
CPSF7-203ENST00000413184 MAP3K5Q99683 1374 aa11.89□□□□□ -0.51
CPSF7-203ENST00000413184 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
CPSF7-203ENST00000413184 CCDC18Q5T9S5 1454 aa11.89□□□□□ -0.51
CPSF7-203ENST00000413184 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-203ENST00000413184 HTRA3P83110 453 aa11.88□□□□□ -0.51
CPSF7-203ENST00000413184 ZFYVE9O95405 1425 aa11.87□□□□□ -0.51
CPSF7-203ENST00000413184 ADAMTS13Q76LX8 1427 aa11.87□□□□□ -0.51
CPSF7-203ENST00000413184 PTPN23Q9H3S7 1636 aa11.87□□□□□ -0.51
CPSF7-203ENST00000413184 GRIN3BO60391 1043 aa11.87□□□□□ -0.51
CPSF7-203ENST00000413184 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
CPSF7-203ENST00000413184 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-203ENST00000413184 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
CPSF7-203ENST00000413184 RIMS2Q9UQ26 1411 aa11.86□□□□□ -0.51
CPSF7-203ENST00000413184 KIF3CO14782 793 aa11.86□□□□□ -0.51
CPSF7-203ENST00000413184 FYCO1Q9BQS8 1478 aa11.86□□□□□ -0.51
CPSF7-203ENST00000413184 ABCC5O15440 1437 aa11.86□□□□□ -0.51
CPSF7-203ENST00000413184 MTFR1LQ9H019 292 aa11.85□□□□□ -0.51
CPSF7-203ENST00000413184 NPHP3Q7Z494 1330 aa11.85□□□□□ -0.51
CPSF7-203ENST00000413184 CROCC2H7BZ55 1655 aa11.84□□□□□ -0.51
CPSF7-203ENST00000413184 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
CPSF7-203ENST00000413184 NALCNQ8IZF0 1738 aa11.84□□□□□ -0.51
CPSF7-203ENST00000413184 KIAA1210Q9ULL0 1709 aa11.84□□□□□ -0.51
CPSF7-203ENST00000413184 XPCQ01831 940 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-203ENST00000413184 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
CPSF7-203ENST00000413184 NEXMIFQ5QGS0 1516 aa11.84□□□□□ -0.51
CPSF7-203ENST00000413184 EIF2AK4Q9P2K8 1649 aaKnown RBP11.83□□□□□ -0.52
CPSF7-203ENST00000413184 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-203ENST00000413184 USP19O94966 1318 aa11.82□□□□□ -0.52
CPSF7-203ENST00000413184 ADGRL2O95490 1459 aa11.82□□□□□ -0.52
CPSF7-203ENST00000413184 PXDNQ92626 1479 aa11.82□□□□□ -0.52
CPSF7-203ENST00000413184 MYO5BQ9ULV0 1848 aa11.81□□□□□ -0.52
CPSF7-203ENST00000413184 THSD7AQ9UPZ6 1657 aa11.81□□□□□ -0.52
CPSF7-203ENST00000413184 ADCY9O60503 1353 aa11.81□□□□□ -0.52
CPSF7-203ENST00000413184 TOMM70O94826 608 aa11.81□□□□□ -0.52
CPSF7-203ENST00000413184 XRN1Q8IZH2 1706 aaKnown RBP11.8□□□□□ -0.52
CPSF7-203ENST00000413184 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
CPSF7-203ENST00000413184 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
CPSF7-203ENST00000413184 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
CPSF7-203ENST00000413184 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
CPSF7-203ENST00000413184 YBX3P16989 372 aaKnown RBP eCLIP11.78□□□□□ -0.523e-7■■□□□ 12.8
CPSF7-203ENST00000413184 SLC52A1Q9NWF4 448 aa11.77□□□□□ -0.53
CPSF7-203ENST00000413184 FOXO3O43524 673 aa11.76□□□□□ -0.53
CPSF7-203ENST00000413184 TSPY4P0CV99 314 aa11.76□□□□□ -0.53
CPSF7-203ENST00000413184 TSPY10P0CW01 314 aa11.76□□□□□ -0.53
CPSF7-203ENST00000413184 ESCO1Q5FWF5 840 aa11.76□□□□□ -0.53
CPSF7-203ENST00000413184 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
CPSF7-203ENST00000413184 NRAPQ86VF7 1730 aa11.76□□□□□ -0.53
CPSF7-203ENST00000413184 RSPH4AQ5TD94 716 aa11.75□□□□□ -0.53
CPSF7-203ENST00000413184 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
CPSF7-203ENST00000413184 CABLES1Q8TDN4 633 aa11.74□□□□□ -0.53
CPSF7-203ENST00000413184 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
CPSF7-203ENST00000413184 SPATA31A5Q5VU36 1347 aa11.74□□□□□ -0.53
CPSF7-203ENST00000413184 SPATA31A7Q8IWB4 1347 aa11.74□□□□□ -0.53
CPSF7-203ENST00000413184 GCC2Q8IWJ2 1684 aa11.74□□□□□ -0.53
CPSF7-203ENST00000413184 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-203ENST00000413184 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
CPSF7-203ENST00000413184 LRPPRCP42704 1394 aaKnown RBP11.73□□□□□ -0.53
CPSF7-203ENST00000413184 NLGN2Q8NFZ4 835 aa11.73□□□□□ -0.53
CPSF7-203ENST00000413184 PDE4DIPQ5VU43 2346 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms