RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 NSD3Q9BZ95 1437 aa27.79■■■□□ 2.04
SLC13A3-204ENST00000413164 B4GALNT3Q6L9W6 998 aa27.79■■■□□ 2.04
SLC13A3-204ENST00000413164 EVC2Q86UK5 1308 aa27.78■■■□□ 2.04
SLC13A3-204ENST00000413164 RCAN3Q9UKA8 241 aa27.77■■■□□ 2.04
SLC13A3-204ENST00000413164 PTPRMP28827 1452 aa27.76■■■□□ 2.03
SLC13A3-204ENST00000413164 RRP1P56182 461 aaKnown RBP27.74■■■□□ 2.03
SLC13A3-204ENST00000413164 ZNF521Q96K83 1311 aa27.73■■■□□ 2.03
SLC13A3-204ENST00000413164 ALKQ9UM73 1620 aa27.73■■■□□ 2.03
SLC13A3-204ENST00000413164 PLEKHH1Q9ULM0 1364 aa27.73■■■□□ 2.03
SLC13A3-204ENST00000413164 A2ML1A8K2U0 1454 aa27.72■■■□□ 2.03
SLC13A3-204ENST00000413164 YTHDC2Q9H6S0 1430 aaKnown RBP27.72■■■□□ 2.03
SLC13A3-204ENST00000413164 POLR3AO14802 1390 aaPredicted RBP27.71■■■□□ 2.03
SLC13A3-204ENST00000413164 ANKRD36BQ8N2N9 1353 aa27.7■■■□□ 2.03
SLC13A3-204ENST00000413164 RBM19Q9Y4C8 960 aaKnown RBP27.68■■■□□ 2.02
SLC13A3-204ENST00000413164 NLRP1Q9C000 1473 aa27.67■■■□□ 2.02
SLC13A3-204ENST00000413164 NINLQ9Y2I6 1382 aa27.67■■■□□ 2.02
SLC13A3-204ENST00000413164 STK26Q9P289 416 aa27.67■■■□□ 2.02
SLC13A3-204ENST00000413164 CGNL1Q0VF96 1302 aa27.66■■■□□ 2.02
SLC13A3-204ENST00000413164 MORC1Q86VD1 984 aa27.65■■■□□ 2.02
SLC13A3-204ENST00000413164 CABP2Q9NPB3 220 aa27.65■■■□□ 2.02
SLC13A3-204ENST00000413164 SHPRHQ149N8 1683 aa27.63■■■□□ 2.01
SLC13A3-204ENST00000413164 NSD2O96028 1365 aa27.63■■■□□ 2.01
SLC13A3-204ENST00000413164 SETD1AO15047 1707 aaKnown RBP27.63■■■□□ 2.01
SLC13A3-204ENST00000413164 SAFB2Q14151 953 aaKnown RBP eCLIP27.62■■■□□ 2.01
SLC13A3-204ENST00000413164 RIMS2Q9UQ26 1411 aa27.62■■■□□ 2.01
SLC13A3-204ENST00000413164 PRAM1Q96QH2 718 aa27.61■■■□□ 2.01
SLC13A3-204ENST00000413164 DUSP27Q5VZP5 1158 aa27.6■■■□□ 2.01
SLC13A3-204ENST00000413164 CCDC136Q96JN2 1154 aa27.6■■■□□ 2.01
SLC13A3-204ENST00000413164 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
SLC13A3-204ENST00000413164 UBR1Q8IWV7 1749 aa27.6■■■□□ 2.01
SLC13A3-204ENST00000413164 DLC1Q96QB1 1528 aa27.59■■■□□ 2.01
SLC13A3-204ENST00000413164 SETD1BQ9UPS6 1966 aaKnown RBP27.59■■■□□ 2.01
SLC13A3-204ENST00000413164 ATAD2Q6PL18 1390 aa27.59■■■□□ 2.01
SLC13A3-204ENST00000413164 GOLGA2Q08379 1002 aa27.58■■■□□ 2.01
SLC13A3-204ENST00000413164 CCDC146Q8IYE0 955 aa27.58■■■□□ 2.01
SLC13A3-204ENST00000413164 A0A1W2PP64 1363 aa27.57■■■□□ 2
SLC13A3-204ENST00000413164 KDM4FA0A1W2PPD8 638 aa27.57■■■□□ 2
SLC13A3-204ENST00000413164 NGEFQ8N5V2 710 aa27.57■■■□□ 2
SLC13A3-204ENST00000413164 ABCC11Q96J66 1382 aa27.57■■■□□ 2
SLC13A3-204ENST00000413164 APAF1O14727 1248 aa27.56■■■□□ 2
SLC13A3-204ENST00000413164 SRPK2P78362 688 aaKnown RBP27.55■■■□□ 2
SLC13A3-204ENST00000413164 TRMT2AQ8IZ69 625 aaKnown RBP27.55■■■□□ 2
SLC13A3-204ENST00000413164 POGKQ9P215 609 aa27.55■■■□□ 2
SLC13A3-204ENST00000413164 NRXN3Q9Y4C0 1643 aa27.55■■■□□ 2
SLC13A3-204ENST00000413164 MINK1Q8N4C8 1332 aaPredicted RBP27.55■■■□□ 2
SLC13A3-204ENST00000413164 CD163L1Q9NR16 1453 aa27.54■■■□□ 2
SLC13A3-204ENST00000413164 HDGFP51858 240 aaKnown RBP27.54■■■□□ 2
SLC13A3-204ENST00000413164 SLFN5Q08AF3 891 aa27.54■■■□□ 2
SLC13A3-204ENST00000413164 EXOC6Q8TAG9 804 aa27.54■■■□□ 2
SLC13A3-204ENST00000413164 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
SLC13A3-204ENST00000413164 TNNT2P45379 298 aaPredicted RBP27.52■■■□□ 2
SLC13A3-204ENST00000413164 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.52■■■□□ 2
SLC13A3-204ENST00000413164 TMEM2Q9UHN6 1383 aa27.52■■■□□ 2
SLC13A3-204ENST00000413164 CEP170BQ9Y4F5 1589 aaPredicted RBP27.51■■■□□ 2
SLC13A3-204ENST00000413164 MTHFSP49914 203 aa27.5■■□□□ 1.99
SLC13A3-204ENST00000413164 MED14O60244 1454 aa27.48■■□□□ 1.99
SLC13A3-204ENST00000413164 ANKRD26Q9UPS8 1709 aa27.48■■□□□ 1.99
SLC13A3-204ENST00000413164 TERF2IPQ9NYB0 399 aa27.47■■□□□ 1.99
SLC13A3-204ENST00000413164 CDK19Q9BWU1 502 aa27.46■■□□□ 1.99
SLC13A3-204ENST00000413164 PLIN1O60240 522 aa27.46■■□□□ 1.99
SLC13A3-204ENST00000413164 SPINK5Q9NQ38 1064 aaPredicted RBP27.46■■□□□ 1.99
SLC13A3-204ENST00000413164 EID1Q9Y6B2 187 aa27.46■■□□□ 1.99
SLC13A3-204ENST00000413164 IQSEC2Q5JU85 1478 aa27.46■■□□□ 1.99
SLC13A3-204ENST00000413164 TXNDC2Q86VQ3 553 aa27.45■■□□□ 1.98
SLC13A3-204ENST00000413164 ZNF142P52746 1687 aaPredicted RBP27.44■■□□□ 1.98
SLC13A3-204ENST00000413164 CFAP53Q96M91 514 aa27.44■■□□□ 1.98
SLC13A3-204ENST00000413164 NKTRP30414 1462 aaKnown RBP27.43■■□□□ 1.98
SLC13A3-204ENST00000413164 E9PSI1 815 aa27.43■■□□□ 1.98
SLC13A3-204ENST00000413164 LTKP29376 864 aa27.42■■□□□ 1.98
SLC13A3-204ENST00000413164 RUNDC1Q96C34 613 aa27.42■■□□□ 1.98
SLC13A3-204ENST00000413164 METP08581 1390 aa27.41■■□□□ 1.98
SLC13A3-204ENST00000413164 SLIT1O75093 1534 aa27.41■■□□□ 1.98
SLC13A3-204ENST00000413164 FYB1O15117 783 aa27.41■■□□□ 1.98
SLC13A3-204ENST00000413164 WAPLQ7Z5K2 1190 aa27.41■■□□□ 1.98
SLC13A3-204ENST00000413164 KNDC1Q76NI1 1749 aa27.4■■□□□ 1.98
SLC13A3-204ENST00000413164 WWC1Q8IX03 1113 aa27.4■■□□□ 1.98
SLC13A3-204ENST00000413164 DMRT2Q9Y5R5 561 aa27.4■■□□□ 1.98
SLC13A3-204ENST00000413164 PHF23Q9BUL5 403 aaPredicted RBP27.4■■□□□ 1.98
SLC13A3-204ENST00000413164 ARHGAP23Q9P227 1491 aa27.39■■□□□ 1.98
SLC13A3-204ENST00000413164 TECPR2O15040 1411 aa27.38■■□□□ 1.97
SLC13A3-204ENST00000413164 GGNBP2Q9H3C7 697 aa27.38■■□□□ 1.97
SLC13A3-204ENST00000413164 CABP1Q9NZU7 370 aa27.38■■□□□ 1.97
SLC13A3-204ENST00000413164 ATP7BP35670 1465 aa27.37■■□□□ 1.97
SLC13A3-204ENST00000413164 HDGFL2Q7Z4V5 671 aaPredicted RBP27.37■■□□□ 1.97
SLC13A3-204ENST00000413164 CRBNQ96SW2 442 aa27.37■■□□□ 1.97
SLC13A3-204ENST00000413164 COL3A1P02461 1466 aaPredicted RBP27.37■■□□□ 1.97
SLC13A3-204ENST00000413164 FANCIQ9NVI1 1328 aa27.36■■□□□ 1.97
SLC13A3-204ENST00000413164 KIF20BQ96Q89 1820 aa27.36■■□□□ 1.97
SLC13A3-204ENST00000413164 NCBP3Q53F19 620 aaKnown RBP27.35■■□□□ 1.97
SLC13A3-204ENST00000413164 C20orf194Q5TEA3 1177 aa27.35■■□□□ 1.97
SLC13A3-204ENST00000413164 TCP11L2Q8N4U5 519 aa27.35■■□□□ 1.97
SLC13A3-204ENST00000413164 FAM135BQ49AJ0 1406 aa27.35■■□□□ 1.97
SLC13A3-204ENST00000413164 SIRT1Q96EB6 747 aa27.34■■□□□ 1.97
SLC13A3-204ENST00000413164 ANKLE2Q86XL3 938 aa27.33■■□□□ 1.97
SLC13A3-204ENST00000413164 CPS1P31327 1500 aa27.33■■□□□ 1.97
SLC13A3-204ENST00000413164 ADGRB2O60241 1585 aa27.33■■□□□ 1.97
SLC13A3-204ENST00000413164 PLEKHG1Q9ULL1 1385 aa27.32■■□□□ 1.96
SLC13A3-204ENST00000413164 CCDC27Q2M243 656 aa27.32■■□□□ 1.96
SLC13A3-204ENST00000413164 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.3■■□□□ 1.96
SLC13A3-204ENST00000413164 WASLO00401 505 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms