RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 CANXP27824 592 aaKnown RBP24.59■■□□□ 1.53
TNFRSF8-202ENST00000413146 TRAK1Q9UPV9 953 aa24.57■■□□□ 1.52
TNFRSF8-202ENST00000413146 SLC4A3P48751 1232 aa24.56■■□□□ 1.52
TNFRSF8-202ENST00000413146 CFAP65Q6ZU64 1925 aaKnown RBP24.55■■□□□ 1.52
TNFRSF8-202ENST00000413146 USP32Q8NFA0 1604 aa24.55■■□□□ 1.52
TNFRSF8-202ENST00000413146 ADGRB1O14514 1584 aa24.54■■□□□ 1.52
TNFRSF8-202ENST00000413146 TNNT2P45379 298 aaPredicted RBP24.53■■□□□ 1.52
TNFRSF8-202ENST00000413146 RUNDC1Q96C34 613 aa24.53■■□□□ 1.52
TNFRSF8-202ENST00000413146 C14orf93Q9H972 538 aaKnown RBP24.53■■□□□ 1.52
TNFRSF8-202ENST00000413146 NPATQ14207 1427 aa24.53■■□□□ 1.52
TNFRSF8-202ENST00000413146 CYB5RLQ6IPT4 315 aa24.53■■□□□ 1.52
TNFRSF8-202ENST00000413146 CLUAP1Q96AJ1 413 aa24.53■■□□□ 1.52
TNFRSF8-202ENST00000413146 SLC12A5Q9H2X9 1139 aa24.53■■□□□ 1.52
TNFRSF8-202ENST00000413146 IGHDP01880 384 aa24.52■■□□□ 1.52
TNFRSF8-202ENST00000413146 IQSEC2Q5JU85 1478 aa24.52■■□□□ 1.52
TNFRSF8-202ENST00000413146 NFKBIBQ15653 356 aa24.51■■□□□ 1.51
TNFRSF8-202ENST00000413146 NEUROD2Q15784 382 aa24.51■■□□□ 1.51
TNFRSF8-202ENST00000413146 PANK1Q8TE04 598 aa24.5■■□□□ 1.51
TNFRSF8-202ENST00000413146 COG6Q9Y2V7 657 aa24.5■■□□□ 1.51
TNFRSF8-202ENST00000413146 CFAP74Q9C0B2 1584 aa24.49■■□□□ 1.51
TNFRSF8-202ENST00000413146 MAPK8IP3Q9UPT6 1336 aa24.49■■□□□ 1.51
TNFRSF8-202ENST00000413146 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
TNFRSF8-202ENST00000413146 TCP11L2Q8N4U5 519 aa24.48■■□□□ 1.51
TNFRSF8-202ENST00000413146 FRAT1Q92837 279 aaPredicted RBP24.48■■□□□ 1.51
TNFRSF8-202ENST00000413146 HECW2Q9P2P5 1572 aa24.48■■□□□ 1.51
TNFRSF8-202ENST00000413146 RPGRIP1LQ68CZ1 1315 aa24.48■■□□□ 1.51
TNFRSF8-202ENST00000413146 CFAP53Q96M91 514 aa24.47■■□□□ 1.51
TNFRSF8-202ENST00000413146 FRMPD1Q5SYB0 1578 aa24.47■■□□□ 1.51
TNFRSF8-202ENST00000413146 TMEM132EQ6IEE7 984 aa24.47■■□□□ 1.51
TNFRSF8-202ENST00000413146 GGT6Q6P531 493 aa24.46■■□□□ 1.51
TNFRSF8-202ENST00000413146 POGZQ7Z3K3 1410 aa24.46■■□□□ 1.51
TNFRSF8-202ENST00000413146 RARSP54136 660 aaKnown RBP24.45■■□□□ 1.51
TNFRSF8-202ENST00000413146 WDR63Q8IWG1 891 aa24.45■■□□□ 1.51
TNFRSF8-202ENST00000413146 GLI2P10070 1586 aa24.45■■□□□ 1.5
TNFRSF8-202ENST00000413146 MTHFSP49914 203 aa24.44■■□□□ 1.5
TNFRSF8-202ENST00000413146 PHF23Q9BUL5 403 aaPredicted RBP24.44■■□□□ 1.5
TNFRSF8-202ENST00000413146 MLH3Q9UHC1 1453 aa24.44■■□□□ 1.5
TNFRSF8-202ENST00000413146 AAMPQ13685 434 aa24.43■■□□□ 1.5
TNFRSF8-202ENST00000413146 ARHGEF28Q8N1W1 1705 aaKnown RBP24.42■■□□□ 1.5
TNFRSF8-202ENST00000413146 ABCC3O15438 1527 aa24.42■■□□□ 1.5
TNFRSF8-202ENST00000413146 GSE1Q14687 1217 aa24.42■■□□□ 1.5
TNFRSF8-202ENST00000413146 PMFBP1Q8TBY8 1022 aa24.42■■□□□ 1.5
TNFRSF8-202ENST00000413146 CCDC27Q2M243 656 aa24.41■■□□□ 1.5
TNFRSF8-202ENST00000413146 CAMSAP1Q5T5Y3 1602 aa24.41■■□□□ 1.5
TNFRSF8-202ENST00000413146 EVC2Q86UK5 1308 aa24.41■■□□□ 1.5
TNFRSF8-202ENST00000413146 NSD2O96028 1365 aa24.41■■□□□ 1.5
TNFRSF8-202ENST00000413146 CD109Q6YHK3 1445 aa24.41■■□□□ 1.5
TNFRSF8-202ENST00000413146 ANKRD36BQ8N2N9 1353 aa24.4■■□□□ 1.5
TNFRSF8-202ENST00000413146 PUS7Q96PZ0 661 aaKnown RBP24.39■■□□□ 1.5
TNFRSF8-202ENST00000413146 TULP4Q9NRJ4 1543 aa24.39■■□□□ 1.49
TNFRSF8-202ENST00000413146 MYH16Q9H6N6 1097 aa24.37■■□□□ 1.49
TNFRSF8-202ENST00000413146 SIGLEC1Q9BZZ2 1709 aa24.36■■□□□ 1.49
TNFRSF8-202ENST00000413146 USP19O94966 1318 aa24.36■■□□□ 1.49
TNFRSF8-202ENST00000413146 PIK3C2BO00750 1634 aa24.36■■□□□ 1.49
TNFRSF8-202ENST00000413146 NCBP3Q53F19 620 aaKnown RBP24.35■■□□□ 1.49
TNFRSF8-202ENST00000413146 IL27Q8NEV9 243 aa24.35■■□□□ 1.49
TNFRSF8-202ENST00000413146 BCL2L13Q9BXK5 485 aa24.35■■□□□ 1.49
TNFRSF8-202ENST00000413146 NEXMIFQ5QGS0 1516 aa24.35■■□□□ 1.49
TNFRSF8-202ENST00000413146 VGFO15240 615 aaPredicted RBP24.35■■□□□ 1.49
TNFRSF8-202ENST00000413146 RLBP1P12271 317 aa24.35■■□□□ 1.49
TNFRSF8-202ENST00000413146 ADGRB2O60241 1585 aa24.35■■□□□ 1.49
TNFRSF8-202ENST00000413146 U2AF1L5P0DN76 240 aaPredicted RBP24.34■■□□□ 1.49
TNFRSF8-202ENST00000413146 U2AF1Q01081 240 aaKnown RBP eCLIP24.34■■□□□ 1.49
TNFRSF8-202ENST00000413146 NUTM2DQ5VT03 806 aaPredicted RBP24.32■■□□□ 1.48
TNFRSF8-202ENST00000413146 TNNQ9UQP3 1299 aa24.32■■□□□ 1.48
TNFRSF8-202ENST00000413146 PCDHB15Q9Y5E8 787 aa24.32■■□□□ 1.48
TNFRSF8-202ENST00000413146 ZMYM3Q14202 1370 aa24.32■■□□□ 1.48
TNFRSF8-202ENST00000413146 SEC24BO95487 1268 aa24.31■■□□□ 1.48
TNFRSF8-202ENST00000413146 FRAT2O75474 233 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF8-202ENST00000413146 BECN1Q14457 450 aa24.3■■□□□ 1.48
TNFRSF8-202ENST00000413146 CABP2Q9NPB3 220 aa24.3■■□□□ 1.48
TNFRSF8-202ENST00000413146 RWDD1Q9H446 243 aaPredicted RBP24.29■■□□□ 1.48
TNFRSF8-202ENST00000413146 NLRP1Q9C000 1473 aa24.29■■□□□ 1.48
TNFRSF8-202ENST00000413146 DIP2BQ9P265 1576 aa24.28■■□□□ 1.48
TNFRSF8-202ENST00000413146 NEO1Q92859 1461 aa24.28■■□□□ 1.48
TNFRSF8-202ENST00000413146 UPF2Q9HAU5 1272 aaKnown RBP24.28■■□□□ 1.48
TNFRSF8-202ENST00000413146 PDZRN3Q9UPQ7 1066 aa24.28■■□□□ 1.48
TNFRSF8-202ENST00000413146 MVPQ14764 893 aaKnown RBP24.26■■□□□ 1.47
TNFRSF8-202ENST00000413146 ZKSCAN2Q63HK3 967 aa24.26■■□□□ 1.47
TNFRSF8-202ENST00000413146 ABCC11Q96J66 1382 aa24.26■■□□□ 1.47
TNFRSF8-202ENST00000413146 CT47B1P0C2W7 299 aaPredicted RBP24.25■■□□□ 1.47
TNFRSF8-202ENST00000413146 SAFB2Q14151 953 aaKnown RBP eCLIP24.25■■□□□ 1.47
TNFRSF8-202ENST00000413146 FTSJ3Q8IY81 847 aaKnown RBP24.25■■□□□ 1.47
TNFRSF8-202ENST00000413146 A0A1W2PP64 1363 aa24.25■■□□□ 1.47
TNFRSF8-202ENST00000413146 DZIP1LQ8IYY4 767 aaKnown RBP24.23■■□□□ 1.47
TNFRSF8-202ENST00000413146 DIP2CQ9Y2E4 1556 aa24.22■■□□□ 1.47
TNFRSF8-202ENST00000413146 SRPK2P78362 688 aaKnown RBP24.22■■□□□ 1.47
TNFRSF8-202ENST00000413146 ANKRD26Q9UPS8 1709 aa24.22■■□□□ 1.47
TNFRSF8-202ENST00000413146 U2SURPO15042 1029 aaKnown RBP24.22■■□□□ 1.47
TNFRSF8-202ENST00000413146 ARHGAP31Q2M1Z3 1444 aa24.21■■□□□ 1.47
TNFRSF8-202ENST00000413146 TSR2Q969E8 191 aaKnown RBP24.21■■□□□ 1.47
TNFRSF8-202ENST00000413146 ZFYVE9O95405 1425 aa24.21■■□□□ 1.47
TNFRSF8-202ENST00000413146 RTN4Q9NQC3 1192 aaKnown RBP24.21■■□□□ 1.47
TNFRSF8-202ENST00000413146 SMC4Q9NTJ3 1288 aa24.2■■□□□ 1.46
TNFRSF8-202ENST00000413146 STK26Q9P289 416 aa24.2■■□□□ 1.46
TNFRSF8-202ENST00000413146 COL3A1P02461 1466 aaPredicted RBP24.19■■□□□ 1.46
TNFRSF8-202ENST00000413146 TBC1D32Q96NH3 1257 aa24.19■■□□□ 1.46
TNFRSF8-202ENST00000413146 GGNBP2Q9H3C7 697 aa24.19■■□□□ 1.46
TNFRSF8-202ENST00000413146 MYO5BQ9ULV0 1848 aa24.19■■□□□ 1.46
TNFRSF8-202ENST00000413146 RAPGEF3O95398 923 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms