RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 ATRNO75882 1429 aa19.66■□□□□ 0.74
PTPRN-203ENST00000412847 TRPC5Q9UL62 973 aaPredicted RBP19.65■□□□□ 0.74
PTPRN-203ENST00000412847 MYOM2P54296 1465 aa19.65■□□□□ 0.74
PTPRN-203ENST00000412847 VGFO15240 615 aaPredicted RBP19.64■□□□□ 0.73
PTPRN-203ENST00000412847 PXDNQ92626 1479 aa19.64■□□□□ 0.73
PTPRN-203ENST00000412847 KIF1AQ12756 1690 aa19.64■□□□□ 0.73
PTPRN-203ENST00000412847 FMN2Q9NZ56 1722 aa19.64■□□□□ 0.73
PTPRN-203ENST00000412847 BRWD3Q6RI45 1802 aa19.64■□□□□ 0.73
PTPRN-203ENST00000412847 RGPD8O14715 1765 aaPredicted RBP19.63■□□□□ 0.73
PTPRN-203ENST00000412847 PPARGC1BQ86YN6 1023 aaKnown RBP19.63■□□□□ 0.73
PTPRN-203ENST00000412847 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
PTPRN-203ENST00000412847 FNBP4Q8N3X1 1017 aaPredicted RBP19.61■□□□□ 0.73
PTPRN-203ENST00000412847 RPGRIP1LQ68CZ1 1315 aa19.6■□□□□ 0.73
PTPRN-203ENST00000412847 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
PTPRN-203ENST00000412847 ABCA3Q99758 1704 aa19.58■□□□□ 0.72
PTPRN-203ENST00000412847 PLCH1Q4KWH8 1693 aa19.57■□□□□ 0.72
PTPRN-203ENST00000412847 BCL9LQ86UU0 1499 aa19.57■□□□□ 0.72
PTPRN-203ENST00000412847 USP32Q8NFA0 1604 aa19.57■□□□□ 0.72
PTPRN-203ENST00000412847 GLI3P10071 1580 aa19.57■□□□□ 0.72
PTPRN-203ENST00000412847 FOXD1Q16676 465 aa19.56■□□□□ 0.72
PTPRN-203ENST00000412847 ESCO1Q5FWF5 840 aa19.55■□□□□ 0.72
PTPRN-203ENST00000412847 NWD2Q9ULI1 1742 aa19.55■□□□□ 0.72
PTPRN-203ENST00000412847 TECPR2O15040 1411 aa19.54■□□□□ 0.72
PTPRN-203ENST00000412847 LRPPRCP42704 1394 aaKnown RBP19.53■□□□□ 0.72
PTPRN-203ENST00000412847 ZRANB1Q9UGI0 708 aa19.52■□□□□ 0.72
PTPRN-203ENST00000412847 XPCQ01831 940 aaPredicted RBP19.51■□□□□ 0.71
PTPRN-203ENST00000412847 SLC4A1APQ9BWU0 796 aaKnown RBP19.51■□□□□ 0.71
PTPRN-203ENST00000412847 EP400Q96L91 3159 aa19.5■□□□□ 0.71
PTPRN-203ENST00000412847 FOXO3O43524 673 aa19.5■□□□□ 0.71
PTPRN-203ENST00000412847 CCDC125Q86Z20 511 aa19.5■□□□□ 0.71
PTPRN-203ENST00000412847 SLIT2O94813 1529 aa19.5■□□□□ 0.71
PTPRN-203ENST00000412847 GJD4Q96KN9 370 aaPredicted RBP19.49■□□□□ 0.71
PTPRN-203ENST00000412847 RALGAPBQ86X10 1494 aa19.48■□□□□ 0.71
PTPRN-203ENST00000412847 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
PTPRN-203ENST00000412847 ADGRF5Q8IZF2 1346 aa19.48■□□□□ 0.71
PTPRN-203ENST00000412847 SPATA31E1Q6ZUB1 1445 aa19.46■□□□□ 0.71
PTPRN-203ENST00000412847 NUTM2FA1L443 756 aa19.46■□□□□ 0.71
PTPRN-203ENST00000412847 STK26Q9P289 416 aa19.46■□□□□ 0.71
PTPRN-203ENST00000412847 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
PTPRN-203ENST00000412847 PIK3C2GO75747 1445 aa19.45■□□□□ 0.7
PTPRN-203ENST00000412847 BLMP54132 1417 aaPredicted RBP19.45■□□□□ 0.7
PTPRN-203ENST00000412847 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
PTPRN-203ENST00000412847 ABCC11Q96J66 1382 aa19.44■□□□□ 0.7
PTPRN-203ENST00000412847 PLEKHH1Q9ULM0 1364 aa19.44■□□□□ 0.7
PTPRN-203ENST00000412847 LRP5O75197 1615 aa19.44■□□□□ 0.7
PTPRN-203ENST00000412847 WAPLQ7Z5K2 1190 aa19.44■□□□□ 0.7
PTPRN-203ENST00000412847 SPATA31A3Q5VYP0 1347 aa19.44■□□□□ 0.7
PTPRN-203ENST00000412847 UNC5CLQ8IV45 518 aa19.43■□□□□ 0.7
PTPRN-203ENST00000412847 TNS3Q68CZ2 1445 aa19.42■□□□□ 0.7
PTPRN-203ENST00000412847 YTHDC2Q9H6S0 1430 aaKnown RBP19.42■□□□□ 0.7
PTPRN-203ENST00000412847 TRPM3Q9HCF6 1732 aaPredicted RBP19.4■□□□□ 0.7
PTPRN-203ENST00000412847 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
PTPRN-203ENST00000412847 RGPD1P0DJD0 1748 aa19.39■□□□□ 0.7
PTPRN-203ENST00000412847 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
PTPRN-203ENST00000412847 KRT28Q7Z3Y7 464 aa19.38■□□□□ 0.69
PTPRN-203ENST00000412847 NRXN1Q9ULB1 1477 aa19.38■□□□□ 0.69
PTPRN-203ENST00000412847 ALS2Q96Q42 1657 aa19.37■□□□□ 0.69
PTPRN-203ENST00000412847 ADGRB2O60241 1585 aa19.37■□□□□ 0.69
PTPRN-203ENST00000412847 HAP1P54257 671 aaPredicted RBP19.37■□□□□ 0.69
PTPRN-203ENST00000412847 CRYBG1Q9Y4K1 1723 aa19.37■□□□□ 0.69
PTPRN-203ENST00000412847 COL14A1Q05707 1796 aaKnown RBP19.36■□□□□ 0.69
PTPRN-203ENST00000412847 SBNO1A3KN83 1393 aa19.34■□□□□ 0.69
PTPRN-203ENST00000412847 SF3B2Q13435 895 aaKnown RBP19.34■□□□□ 0.69
PTPRN-203ENST00000412847 DEFB132Q7Z7B7 95 aa19.34■□□□□ 0.69
PTPRN-203ENST00000412847 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
PTPRN-203ENST00000412847 PSME1Q06323 249 aa19.33■□□□□ 0.68
PTPRN-203ENST00000412847 VPS72Q15906 364 aa19.33■□□□□ 0.68
PTPRN-203ENST00000412847 SEPT12Q8IYM1 358 aa19.33■□□□□ 0.68
PTPRN-203ENST00000412847 DLC1Q96QB1 1528 aa19.33■□□□□ 0.68
PTPRN-203ENST00000412847 TNS1Q9HBL0 1735 aaKnown RBP19.33■□□□□ 0.68
PTPRN-203ENST00000412847 SRCAPQ6ZRS2 3230 aa19.32■□□□□ 0.68
PTPRN-203ENST00000412847 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
PTPRN-203ENST00000412847 ITSN1Q15811 1721 aa19.32■□□□□ 0.68
PTPRN-203ENST00000412847 SIRT1Q96EB6 747 aa19.32■□□□□ 0.68
PTPRN-203ENST00000412847 CABLES1Q8TDN4 633 aa19.31■□□□□ 0.68
PTPRN-203ENST00000412847 MPHOSPH9Q99550 1183 aa19.31■□□□□ 0.68
PTPRN-203ENST00000412847 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
PTPRN-203ENST00000412847 DHX57Q6P158 1386 aaKnown RBP19.31■□□□□ 0.68
PTPRN-203ENST00000412847 PLEKHG5O94827 1062 aa19.3■□□□□ 0.68
PTPRN-203ENST00000412847 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
PTPRN-203ENST00000412847 LMOD2Q6P5Q4 547 aa19.28■□□□□ 0.68
PTPRN-203ENST00000412847 KRT27Q7Z3Y8 459 aa19.28■□□□□ 0.68
PTPRN-203ENST00000412847 C14orf93Q9H972 538 aaKnown RBP19.28■□□□□ 0.68
PTPRN-203ENST00000412847 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.68
PTPRN-203ENST00000412847 ONECUT3O60422 494 aaPredicted RBP19.27■□□□□ 0.68
PTPRN-203ENST00000412847 PHRF1Q9P1Y6 1649 aaKnown RBP19.26■□□□□ 0.67
PTPRN-203ENST00000412847 ADGRB1O14514 1584 aa19.25■□□□□ 0.67
PTPRN-203ENST00000412847 A0A0G2JS52 829 aa19.25■□□□□ 0.67
PTPRN-203ENST00000412847 MYT1Q01538 1121 aa19.25■□□□□ 0.67
PTPRN-203ENST00000412847 CFAP70Q5T0N1 1121 aa19.25■□□□□ 0.67
PTPRN-203ENST00000412847 SAFB2Q14151 953 aaKnown RBP eCLIP19.24■□□□□ 0.67
PTPRN-203ENST00000412847 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
PTPRN-203ENST00000412847 ARHGEF28Q8N1W1 1705 aaKnown RBP19.24■□□□□ 0.67
PTPRN-203ENST00000412847 TULP4Q9NRJ4 1543 aa19.24■□□□□ 0.67
PTPRN-203ENST00000412847 BAG6P46379 1132 aa19.23■□□□□ 0.67
PTPRN-203ENST00000412847 FAM83GA6ND36 823 aa19.22■□□□□ 0.67
PTPRN-203ENST00000412847 PMFBP1Q8TBY8 1022 aa19.22■□□□□ 0.67
PTPRN-203ENST00000412847 POGKQ9P215 609 aa19.21■□□□□ 0.67
PTPRN-203ENST00000412847 EIF3AQ14152 1382 aaKnown RBP19.2■□□□□ 0.66
PTPRN-203ENST00000412847 FAM98CQ17RN3 349 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms