RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
LINC00388-201ENST00000412714 IFT172Q9UG01 1749 aa18.72■□□□□ 0.59
LINC00388-201ENST00000412714 SOS2Q07890 1332 aaPredicted RBP18.72■□□□□ 0.59
LINC00388-201ENST00000412714 STK26Q9P289 416 aa18.71■□□□□ 0.59
LINC00388-201ENST00000412714 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
LINC00388-201ENST00000412714 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
LINC00388-201ENST00000412714 TECPR2O15040 1411 aa18.69■□□□□ 0.58
LINC00388-201ENST00000412714 ADAMTS2O95450 1211 aa18.69■□□□□ 0.58
LINC00388-201ENST00000412714 ESCO1Q5FWF5 840 aa18.68■□□□□ 0.58
LINC00388-201ENST00000412714 NGLY1Q96IV0 654 aa18.68■□□□□ 0.58
LINC00388-201ENST00000412714 KNDC1Q76NI1 1749 aa18.68■□□□□ 0.58
LINC00388-201ENST00000412714 NPHP3Q7Z494 1330 aa18.68■□□□□ 0.58
LINC00388-201ENST00000412714 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
LINC00388-201ENST00000412714 QTRT2Q9H974 415 aaKnown RBP18.67■□□□□ 0.58
LINC00388-201ENST00000412714 ABCC11Q96J66 1382 aa18.67■□□□□ 0.58
LINC00388-201ENST00000412714 RBM6P78332 1123 aaKnown RBP18.66■□□□□ 0.58
LINC00388-201ENST00000412714 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
LINC00388-201ENST00000412714 WAPLQ7Z5K2 1190 aa18.66■□□□□ 0.58
LINC00388-201ENST00000412714 UPF1Q92900 1129 aaKnown RBP eCLIP18.66■□□□□ 0.58
LINC00388-201ENST00000412714 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.57
LINC00388-201ENST00000412714 COL22A1Q8NFW1 1626 aaPredicted RBP18.63■□□□□ 0.57
LINC00388-201ENST00000412714 NUTM2FA1L443 756 aa18.63■□□□□ 0.57
LINC00388-201ENST00000412714 FOXO3O43524 673 aa18.62■□□□□ 0.57
LINC00388-201ENST00000412714 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
LINC00388-201ENST00000412714 RGS12O14924 1447 aa18.62■□□□□ 0.57
LINC00388-201ENST00000412714 PXDNQ92626 1479 aa18.61■□□□□ 0.57
LINC00388-201ENST00000412714 USP21Q9UK80 565 aa18.61■□□□□ 0.57
LINC00388-201ENST00000412714 MYOM2P54296 1465 aa18.6■□□□□ 0.57
LINC00388-201ENST00000412714 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
LINC00388-201ENST00000412714 FMN2Q9NZ56 1722 aa18.6■□□□□ 0.57
LINC00388-201ENST00000412714 DHX57Q6P158 1386 aaKnown RBP18.59■□□□□ 0.57
LINC00388-201ENST00000412714 RAB3GAP2Q9H2M9 1393 aa18.59■□□□□ 0.57
LINC00388-201ENST00000412714 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
LINC00388-201ENST00000412714 TRPC5Q9UL62 973 aaPredicted RBP18.59■□□□□ 0.57
LINC00388-201ENST00000412714 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.57
LINC00388-201ENST00000412714 KIF1AQ12756 1690 aa18.58■□□□□ 0.57
LINC00388-201ENST00000412714 SIRT1Q96EB6 747 aa18.58■□□□□ 0.56
LINC00388-201ENST00000412714 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
LINC00388-201ENST00000412714 FNBP4Q8N3X1 1017 aaPredicted RBP18.57■□□□□ 0.56
LINC00388-201ENST00000412714 MARF1Q9Y4F3 1742 aaKnown RBP18.55■□□□□ 0.56
LINC00388-201ENST00000412714 ATRNO75882 1429 aa18.53■□□□□ 0.56
LINC00388-201ENST00000412714 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.56
LINC00388-201ENST00000412714 KRT28Q7Z3Y7 464 aa18.52■□□□□ 0.56
LINC00388-201ENST00000412714 PRAM1Q96QH2 718 aa18.52■□□□□ 0.56
LINC00388-201ENST00000412714 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.55
LINC00388-201ENST00000412714 SPATA31A3Q5VYP0 1347 aa18.51■□□□□ 0.55
LINC00388-201ENST00000412714 RGPD8O14715 1765 aaPredicted RBP18.51■□□□□ 0.55
LINC00388-201ENST00000412714 POGKQ9P215 609 aa18.51■□□□□ 0.55
LINC00388-201ENST00000412714 PHF8Q9UPP1 1060 aa18.51■□□□□ 0.55
LINC00388-201ENST00000412714 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
LINC00388-201ENST00000412714 PSME1Q06323 249 aa18.49■□□□□ 0.55
LINC00388-201ENST00000412714 BCL9LQ86UU0 1499 aa18.49■□□□□ 0.55
LINC00388-201ENST00000412714 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
LINC00388-201ENST00000412714 HAP1P54257 671 aaPredicted RBP18.48■□□□□ 0.55
LINC00388-201ENST00000412714 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
LINC00388-201ENST00000412714 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
LINC00388-201ENST00000412714 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
LINC00388-201ENST00000412714 KDM2AQ9Y2K7 1162 aa18.46■□□□□ 0.55
LINC00388-201ENST00000412714 ANKARQ7Z5J8 1434 aa18.46■□□□□ 0.55
LINC00388-201ENST00000412714 ADGRB1O14514 1584 aa18.46■□□□□ 0.55
LINC00388-201ENST00000412714 DCAF11Q8TEB1 546 aa18.45■□□□□ 0.54
LINC00388-201ENST00000412714 GJD4Q96KN9 370 aaPredicted RBP18.45■□□□□ 0.54
LINC00388-201ENST00000412714 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
LINC00388-201ENST00000412714 ADGRB2O60241 1585 aa18.45■□□□□ 0.54
LINC00388-201ENST00000412714 SBNO1A3KN83 1393 aa18.44■□□□□ 0.54
LINC00388-201ENST00000412714 LMOD2Q6P5Q4 547 aa18.44■□□□□ 0.54
LINC00388-201ENST00000412714 UNC5CLQ8IV45 518 aa18.44■□□□□ 0.54
LINC00388-201ENST00000412714 SLIT2O94813 1529 aa18.44■□□□□ 0.54
LINC00388-201ENST00000412714 ARHGEF10O15013 1369 aa18.43■□□□□ 0.54
LINC00388-201ENST00000412714 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
LINC00388-201ENST00000412714 STAC3Q96MF2 364 aa18.43■□□□□ 0.54
LINC00388-201ENST00000412714 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
LINC00388-201ENST00000412714 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
LINC00388-201ENST00000412714 HIRIP3Q9BW71 556 aaPredicted RBP18.42■□□□□ 0.54
LINC00388-201ENST00000412714 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
LINC00388-201ENST00000412714 RALGAPBQ86X10 1494 aa18.4■□□□□ 0.54
LINC00388-201ENST00000412714 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
LINC00388-201ENST00000412714 ABCA3Q99758 1704 aa18.39■□□□□ 0.53
LINC00388-201ENST00000412714 GPRASP1Q5JY77 1395 aa18.39■□□□□ 0.53
LINC00388-201ENST00000412714 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.53
LINC00388-201ENST00000412714 GLI3P10071 1580 aa18.38■□□□□ 0.53
LINC00388-201ENST00000412714 EP400Q96L91 3159 aa18.38■□□□□ 0.53
LINC00388-201ENST00000412714 PLCH1Q4KWH8 1693 aa18.38■□□□□ 0.53
LINC00388-201ENST00000412714 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
LINC00388-201ENST00000412714 WASLO00401 505 aaPredicted RBP18.37■□□□□ 0.53
LINC00388-201ENST00000412714 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
LINC00388-201ENST00000412714 CCDC9Q9Y3X0 531 aaKnown RBP18.36■□□□□ 0.53
LINC00388-201ENST00000412714 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
LINC00388-201ENST00000412714 PRR36Q9H6K5 1346 aa18.35■□□□□ 0.53
LINC00388-201ENST00000412714 VPS72Q15906 364 aa18.35■□□□□ 0.53
LINC00388-201ENST00000412714 ARHGEF28Q8N1W1 1705 aaKnown RBP18.35■□□□□ 0.53
LINC00388-201ENST00000412714 NGDNQ8NEJ9 315 aaKnown RBP18.34■□□□□ 0.53
LINC00388-201ENST00000412714 ITSN1Q15811 1721 aa18.32■□□□□ 0.52
LINC00388-201ENST00000412714 ALS2Q96Q42 1657 aa18.32■□□□□ 0.52
LINC00388-201ENST00000412714 BRWD3Q6RI45 1802 aa18.31■□□□□ 0.52
LINC00388-201ENST00000412714 FAM83GA6ND36 823 aa18.31■□□□□ 0.52
LINC00388-201ENST00000412714 PAK3O75914 559 aaPredicted RBP18.31■□□□□ 0.52
LINC00388-201ENST00000412714 SEPT12Q8IYM1 358 aa18.31■□□□□ 0.52
LINC00388-201ENST00000412714 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
LINC00388-201ENST00000412714 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms