RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
SMPD4-203ENST00000412570 RRP7AQ9Y3A4 280 aaKnown RBP13.09□□□□□ -0.31
SMPD4-203ENST00000412570 NME9Q86XW9 330 aa13.08□□□□□ -0.31
SMPD4-203ENST00000412570 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
SMPD4-203ENST00000412570 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.32
SMPD4-203ENST00000412570 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-203ENST00000412570 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-203ENST00000412570 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
SMPD4-203ENST00000412570 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMPD4-203ENST00000412570 MYOM2P54296 1465 aa13.06□□□□□ -0.32
SMPD4-203ENST00000412570 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-203ENST00000412570 C3P01024 1663 aa13.06□□□□□ -0.32
SMPD4-203ENST00000412570 ALKQ9UM73 1620 aa13.05□□□□□ -0.32
SMPD4-203ENST00000412570 FOXO3O43524 673 aa13.05□□□□□ -0.32
SMPD4-203ENST00000412570 PTPRMP28827 1452 aa13.05□□□□□ -0.32
SMPD4-203ENST00000412570 SPATA31D1Q6ZQQ2 1576 aa13.05□□□□□ -0.32
SMPD4-203ENST00000412570 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
SMPD4-203ENST00000412570 ZC3H13Q5T200 1668 aaKnown RBP13.04□□□□□ -0.32
SMPD4-203ENST00000412570 CCER2I3L3R5 266 aa13.04□□□□□ -0.32
SMPD4-203ENST00000412570 MTHFSP49914 203 aa13.04□□□□□ -0.32
SMPD4-203ENST00000412570 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-203ENST00000412570 PPLO60437 1756 aa13.04□□□□□ -0.32
SMPD4-203ENST00000412570 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
SMPD4-203ENST00000412570 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
SMPD4-203ENST00000412570 ORAI2Q96SN7 254 aa13.03□□□□□ -0.32
SMPD4-203ENST00000412570 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
SMPD4-203ENST00000412570 PRR36Q9H6K5 1346 aa13.03□□□□□ -0.32
SMPD4-203ENST00000412570 ZFYVE9O95405 1425 aa13.02□□□□□ -0.32
SMPD4-203ENST00000412570 ASXL1Q8IXJ9 1541 aa13.02□□□□□ -0.33
SMPD4-203ENST00000412570 NLRP13Q86W25 1043 aa13.02□□□□□ -0.33
SMPD4-203ENST00000412570 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
SMPD4-203ENST00000412570 PTPRUQ92729 1446 aa13.01□□□□□ -0.33
SMPD4-203ENST00000412570 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
SMPD4-203ENST00000412570 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-203ENST00000412570 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMPD4-203ENST00000412570 RALBP1Q15311 655 aa13.01□□□□□ -0.33
SMPD4-203ENST00000412570 LRPPRCP42704 1394 aaKnown RBP13.01□□□□□ -0.33
SMPD4-203ENST00000412570 ADGRB1O14514 1584 aa13.01□□□□□ -0.33
SMPD4-203ENST00000412570 REREQ9P2R6 1566 aa13.01□□□□□ -0.33
SMPD4-203ENST00000412570 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
SMPD4-203ENST00000412570 ACEP12821 1306 aa13□□□□□ -0.33
SMPD4-203ENST00000412570 CGNL1Q0VF96 1302 aa13□□□□□ -0.33
SMPD4-203ENST00000412570 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
SMPD4-203ENST00000412570 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
SMPD4-203ENST00000412570 HMOX1P09601 288 aa13□□□□□ -0.33
SMPD4-203ENST00000412570 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
SMPD4-203ENST00000412570 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
SMPD4-203ENST00000412570 TBX22Q9Y458 520 aa12.99□□□□□ -0.33
SMPD4-203ENST00000412570 FYB1O15117 783 aa12.99□□□□□ -0.33
SMPD4-203ENST00000412570 PSME1Q06323 249 aa12.99□□□□□ -0.33
SMPD4-203ENST00000412570 PNISRQ8TF01 805 aaKnown RBP12.99□□□□□ -0.33
SMPD4-203ENST00000412570 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
SMPD4-203ENST00000412570 NLRP1Q9C000 1473 aa12.98□□□□□ -0.33
SMPD4-203ENST00000412570 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
SMPD4-203ENST00000412570 NLRP6P59044 892 aa12.98□□□□□ -0.33
SMPD4-203ENST00000412570 PLEKHG1Q9ULL1 1385 aa12.97□□□□□ -0.33
SMPD4-203ENST00000412570 FKBP8Q14318 412 aa12.97□□□□□ -0.33
SMPD4-203ENST00000412570 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
SMPD4-203ENST00000412570 ABTB2Q8N961 1025 aa12.96□□□□□ -0.33
SMPD4-203ENST00000412570 APAF1O14727 1248 aa12.96□□□□□ -0.33
SMPD4-203ENST00000412570 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.33
SMPD4-203ENST00000412570 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
SMPD4-203ENST00000412570 TULP4Q9NRJ4 1543 aa12.95□□□□□ -0.34
SMPD4-203ENST00000412570 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
SMPD4-203ENST00000412570 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-203ENST00000412570 QRICH2Q9H0J4 1663 aa12.95□□□□□ -0.34
SMPD4-203ENST00000412570 CEP170BQ9Y4F5 1589 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-203ENST00000412570 UBR1Q8IWV7 1749 aa12.95□□□□□ -0.34
SMPD4-203ENST00000412570 ATF3P18847 181 aa12.95□□□□□ -0.34
SMPD4-203ENST00000412570 PIP4K2BP78356 416 aa12.94□□□□□ -0.34
SMPD4-203ENST00000412570 COG3Q96JB2 828 aa12.94□□□□□ -0.34
SMPD4-203ENST00000412570 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
SMPD4-203ENST00000412570 IFT172Q9UG01 1749 aa12.94□□□□□ -0.34
SMPD4-203ENST00000412570 NPHP4O75161 1426 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-203ENST00000412570 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
SMPD4-203ENST00000412570 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-203ENST00000412570 ATAD2Q6PL18 1390 aa12.92□□□□□ -0.34
SMPD4-203ENST00000412570 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
SMPD4-203ENST00000412570 PHF8Q9UPP1 1060 aa12.91□□□□□ -0.34
SMPD4-203ENST00000412570 USHBP1Q8N6Y0 703 aa12.91□□□□□ -0.34
SMPD4-203ENST00000412570 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
SMPD4-203ENST00000412570 BCL11AQ9H165 835 aa12.9□□□□□ -0.34
SMPD4-203ENST00000412570 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.35
SMPD4-203ENST00000412570 NEFLP07196 543 aa12.89□□□□□ -0.35
SMPD4-203ENST00000412570 AMPHP49418 695 aa12.89□□□□□ -0.35
SMPD4-203ENST00000412570 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
SMPD4-203ENST00000412570 ANKRD36BQ8N2N9 1353 aa12.89□□□□□ -0.35
SMPD4-203ENST00000412570 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
SMPD4-203ENST00000412570 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
SMPD4-203ENST00000412570 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
SMPD4-203ENST00000412570 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
SMPD4-203ENST00000412570 PLIN1O60240 522 aa12.87□□□□□ -0.35
SMPD4-203ENST00000412570 TTC21BQ7Z4L5 1316 aa12.87□□□□□ -0.35
SMPD4-203ENST00000412570 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
SMPD4-203ENST00000412570 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
SMPD4-203ENST00000412570 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
SMPD4-203ENST00000412570 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
SMPD4-203ENST00000412570 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
SMPD4-203ENST00000412570 ADAMTSL3P82987 1691 aa12.86□□□□□ -0.35
SMPD4-203ENST00000412570 AEBP1Q8IUX7 1158 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms