RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 CDC42BPGQ6DT37 1551 aa32.62■■■□□ 2.81
CROT-202ENST00000412227 LRPPRCP42704 1394 aaKnown RBP32.6■■■□□ 2.81
CROT-202ENST00000412227 ESCO1Q5FWF5 840 aa32.59■■■□□ 2.81
CROT-202ENST00000412227 TMEM132EQ6IEE7 984 aa32.59■■■□□ 2.81
CROT-202ENST00000412227 WAPLQ7Z5K2 1190 aa32.59■■■□□ 2.81
CROT-202ENST00000412227 KNDC1Q76NI1 1749 aa32.59■■■□□ 2.81
CROT-202ENST00000412227 TECPR2O15040 1411 aa32.59■■■□□ 2.81
CROT-202ENST00000412227 ADAMTS2O95450 1211 aa32.58■■■□□ 2.81
CROT-202ENST00000412227 PIK3C2GO75747 1445 aa32.58■■■□□ 2.81
CROT-202ENST00000412227 ABCC11Q96J66 1382 aa32.57■■■□□ 2.8
CROT-202ENST00000412227 CDK12Q9NYV4 1490 aaPredicted RBP32.55■■■□□ 2.8
CROT-202ENST00000412227 NGLY1Q96IV0 654 aa32.55■■■□□ 2.8
CROT-202ENST00000412227 QTRT2Q9H974 415 aaKnown RBP32.55■■■□□ 2.8
CROT-202ENST00000412227 NPHP3Q7Z494 1330 aa32.53■■■□□ 2.8
CROT-202ENST00000412227 UPF1Q92900 1129 aaKnown RBP eCLIP32.52■■■□□ 2.8
CROT-202ENST00000412227 PLEKHH1Q9ULM0 1364 aa32.51■■■□□ 2.79
CROT-202ENST00000412227 NUTM2FA1L443 756 aa32.51■■■□□ 2.79
CROT-202ENST00000412227 YTHDC2Q9H6S0 1430 aaKnown RBP32.51■■■□□ 2.79
CROT-202ENST00000412227 COL22A1Q8NFW1 1626 aaPredicted RBP32.5■■■□□ 2.79
CROT-202ENST00000412227 FOXO3O43524 673 aa32.49■■■□□ 2.79
CROT-202ENST00000412227 RBM6P78332 1123 aaKnown RBP32.49■■■□□ 2.79
CROT-202ENST00000412227 RAB3GAP2Q9H2M9 1393 aa32.48■■■□□ 2.79
CROT-202ENST00000412227 C14orf93Q9H972 538 aaKnown RBP32.47■■■□□ 2.79
CROT-202ENST00000412227 FMN2Q9NZ56 1722 aa32.47■■■□□ 2.79
CROT-202ENST00000412227 PXDNQ92626 1479 aa32.47■■■□□ 2.79
CROT-202ENST00000412227 XPCQ01831 940 aaPredicted RBP32.46■■■□□ 2.79
CROT-202ENST00000412227 MYOM2P54296 1465 aa32.44■■■□□ 2.78
CROT-202ENST00000412227 NRXN1Q9ULB1 1477 aa32.43■■■□□ 2.78
CROT-202ENST00000412227 CFAP70Q5T0N1 1121 aa32.43■■■□□ 2.78
CROT-202ENST00000412227 SIRT1Q96EB6 747 aa32.43■■■□□ 2.78
CROT-202ENST00000412227 USP21Q9UK80 565 aa32.43■■■□□ 2.78
CROT-202ENST00000412227 DHX57Q6P158 1386 aaKnown RBP32.43■■■□□ 2.78
CROT-202ENST00000412227 RGS12O14924 1447 aa32.42■■■□□ 2.78
CROT-202ENST00000412227 RGPD8O14715 1765 aaPredicted RBP32.41■■■□□ 2.78
CROT-202ENST00000412227 MARF1Q9Y4F3 1742 aaKnown RBP32.4■■■□□ 2.78
CROT-202ENST00000412227 KIF1AQ12756 1690 aa32.39■■■□□ 2.78
CROT-202ENST00000412227 FNBP4Q8N3X1 1017 aaPredicted RBP32.38■■■□□ 2.77
CROT-202ENST00000412227 TRPC5Q9UL62 973 aaPredicted RBP32.37■■■□□ 2.77
CROT-202ENST00000412227 SAFB2Q14151 953 aaKnown RBP eCLIP32.33■■■□□ 2.77
CROT-202ENST00000412227 PRAM1Q96QH2 718 aa32.32■■■□□ 2.76
CROT-202ENST00000412227 KRT28Q7Z3Y7 464 aa32.31■■■□□ 2.76
CROT-202ENST00000412227 SPATA31A3Q5VYP0 1347 aa32.29■■■□□ 2.76
CROT-202ENST00000412227 ATRNO75882 1429 aa32.29■■■□□ 2.76
CROT-202ENST00000412227 POGKQ9P215 609 aa32.29■■■□□ 2.76
CROT-202ENST00000412227 PHF8Q9UPP1 1060 aa32.29■■■□□ 2.76
CROT-202ENST00000412227 DLC1Q96QB1 1528 aa32.27■■■□□ 2.76
CROT-202ENST00000412227 KDM2AQ9Y2K7 1162 aa32.26■■■□□ 2.75
CROT-202ENST00000412227 BCL9LQ86UU0 1499 aa32.25■■■□□ 2.75
CROT-202ENST00000412227 PSME1Q06323 249 aa32.24■■■□□ 2.75
CROT-202ENST00000412227 DCAF11Q8TEB1 546 aa32.24■■■□□ 2.75
CROT-202ENST00000412227 ADGRB1O14514 1584 aa32.23■■■□□ 2.75
CROT-202ENST00000412227 TRAK1Q9UPV9 953 aa32.22■■■□□ 2.75
CROT-202ENST00000412227 ATAD2Q6PL18 1390 aa32.21■■■□□ 2.75
CROT-202ENST00000412227 HRCP23327 699 aa32.21■■■□□ 2.75
CROT-202ENST00000412227 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.2■■■□□ 2.75
CROT-202ENST00000412227 TNS3Q68CZ2 1445 aa32.19■■■□□ 2.74
CROT-202ENST00000412227 HAP1P54257 671 aaPredicted RBP32.18■■■□□ 2.74
CROT-202ENST00000412227 ADGRB2O60241 1585 aa32.18■■■□□ 2.74
CROT-202ENST00000412227 USP32Q8NFA0 1604 aa32.18■■■□□ 2.74
CROT-202ENST00000412227 GJD4Q96KN9 370 aaPredicted RBP32.17■■■□□ 2.74
CROT-202ENST00000412227 STAC3Q96MF2 364 aa32.17■■■□□ 2.74
CROT-202ENST00000412227 ANKARQ7Z5J8 1434 aa32.17■■■□□ 2.74
CROT-202ENST00000412227 LMOD2Q6P5Q4 547 aa32.16■■■□□ 2.74
CROT-202ENST00000412227 PMFBP1Q8TBY8 1022 aa32.16■■■□□ 2.74
CROT-202ENST00000412227 UNC5CLQ8IV45 518 aa32.15■■■□□ 2.74
CROT-202ENST00000412227 HIRIP3Q9BW71 556 aaPredicted RBP32.15■■■□□ 2.74
CROT-202ENST00000412227 SBNO1A3KN83 1393 aa32.15■■■□□ 2.74
CROT-202ENST00000412227 PLEKHG5O94827 1062 aa32.14■■■□□ 2.74
CROT-202ENST00000412227 MINK1Q8N4C8 1332 aaPredicted RBP32.14■■■□□ 2.74
CROT-202ENST00000412227 SLIT2O94813 1529 aa32.14■■■□□ 2.74
CROT-202ENST00000412227 CABLES1Q8TDN4 633 aa32.13■■■□□ 2.73
CROT-202ENST00000412227 ARHGEF10O15013 1369 aa32.1■■■□□ 2.73
CROT-202ENST00000412227 ABCA3Q99758 1704 aa32.1■■■□□ 2.73
CROT-202ENST00000412227 EIF3AQ14152 1382 aaKnown RBP32.08■■■□□ 2.73
CROT-202ENST00000412227 GLI3P10071 1580 aa32.07■■■□□ 2.72
CROT-202ENST00000412227 PLCH1Q4KWH8 1693 aa32.06■■■□□ 2.72
CROT-202ENST00000412227 RALGAPBQ86X10 1494 aa32.06■■■□□ 2.72
CROT-202ENST00000412227 TULP4Q9NRJ4 1543 aa32.05■■■□□ 2.72
CROT-202ENST00000412227 WASLO00401 505 aaPredicted RBP32.05■■■□□ 2.72
CROT-202ENST00000412227 ARHGEF28Q8N1W1 1705 aaKnown RBP32.05■■■□□ 2.72
CROT-202ENST00000412227 TRPM3Q9HCF6 1732 aaPredicted RBP32.05■■■□□ 2.72
CROT-202ENST00000412227 NWD2Q9ULI1 1742 aa32.05■■■□□ 2.72
CROT-202ENST00000412227 GPRASP1Q5JY77 1395 aa32.04■■■□□ 2.72
CROT-202ENST00000412227 PRR36Q9H6K5 1346 aa32.03■■■□□ 2.72
CROT-202ENST00000412227 BRWD3Q6RI45 1802 aa32.01■■■□□ 2.72
CROT-202ENST00000412227 ALS2Q96Q42 1657 aa31.99■■■□□ 2.71
CROT-202ENST00000412227 EP400Q96L91 3159 aa31.99■■■□□ 2.71
CROT-202ENST00000412227 VPS72Q15906 364 aa31.98■■■□□ 2.71
CROT-202ENST00000412227 CCDC125Q86Z20 511 aa31.98■■■□□ 2.71
CROT-202ENST00000412227 NGDNQ8NEJ9 315 aaKnown RBP31.98■■■□□ 2.71
CROT-202ENST00000412227 CCDC9Q9Y3X0 531 aaKnown RBP31.98■■■□□ 2.71
CROT-202ENST00000412227 ITSN1Q15811 1721 aa31.97■■■□□ 2.71
CROT-202ENST00000412227 FAM83GA6ND36 823 aa31.96■■■□□ 2.71
CROT-202ENST00000412227 KIAA1210Q9ULL0 1709 aa31.94■■■□□ 2.7
CROT-202ENST00000412227 PAK3O75914 559 aaPredicted RBP31.92■■■□□ 2.7
CROT-202ENST00000412227 SEPT12Q8IYM1 358 aa31.92■■■□□ 2.7
CROT-202ENST00000412227 NUDT16Q96DE0 195 aaKnown RBP31.91■■■□□ 2.7
CROT-202ENST00000412227 COL14A1Q05707 1796 aaKnown RBP31.89■■■□□ 2.7
CROT-202ENST00000412227 ATP7BP35670 1465 aa31.89■■■□□ 2.7
CROT-202ENST00000412227 NRAPQ86VF7 1730 aa31.89■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms