RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 EVC2Q86UK5 1308 aa26.04■■□□□ 1.76
CDC42-204ENST00000411827 QRICH2Q9H0J4 1663 aa26.03■■□□□ 1.76
CDC42-204ENST00000411827 ZNF316A6NFI3 1004 aaPredicted RBP26.02■■□□□ 1.76
CDC42-204ENST00000411827 ZNF335Q9H4Z2 1342 aaPredicted RBP26.02■■□□□ 1.76
CDC42-204ENST00000411827 PLEKHH1Q9ULM0 1364 aa26■■□□□ 1.75
CDC42-204ENST00000411827 LTBP4Q8N2S1 1624 aa25.99■■□□□ 1.75
CDC42-204ENST00000411827 SAFB2Q14151 953 aaKnown RBP eCLIP25.99■■□□□ 1.75
CDC42-204ENST00000411827 ADGRL3Q9HAR2 1447 aa25.98■■□□□ 1.75
CDC42-204ENST00000411827 ADGRB2O60241 1585 aa25.98■■□□□ 1.75
CDC42-204ENST00000411827 MINK1Q8N4C8 1332 aaPredicted RBP25.97■■□□□ 1.75
CDC42-204ENST00000411827 C19orf44Q9H6X5 657 aa25.97■■□□□ 1.75
CDC42-204ENST00000411827 TMEM94Q12767 1356 aa25.96■■□□□ 1.75
CDC42-204ENST00000411827 C14orf37Q86TY3 774 aa25.96■■□□□ 1.75
CDC42-204ENST00000411827 WASLO00401 505 aaPredicted RBP25.95■■□□□ 1.74
CDC42-204ENST00000411827 HIRIP3Q9BW71 556 aaPredicted RBP25.95■■□□□ 1.74
CDC42-204ENST00000411827 DCCP43146 1447 aa25.95■■□□□ 1.74
CDC42-204ENST00000411827 STRCP1A6NGW2 1772 aa25.95■■□□□ 1.74
CDC42-204ENST00000411827 LRRC7Q96NW7 1537 aa25.94■■□□□ 1.74
CDC42-204ENST00000411827 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
CDC42-204ENST00000411827 CDK19Q9BWU1 502 aa25.91■■□□□ 1.74
CDC42-204ENST00000411827 MSH6P52701 1360 aa25.91■■□□□ 1.74
CDC42-204ENST00000411827 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.91■■□□□ 1.74
CDC42-204ENST00000411827 CDC42BPGQ6DT37 1551 aa25.9■■□□□ 1.74
CDC42-204ENST00000411827 SRPK2P78362 688 aaKnown RBP25.9■■□□□ 1.74
CDC42-204ENST00000411827 NINLQ9Y2I6 1382 aa25.9■■□□□ 1.74
CDC42-204ENST00000411827 CADPS2Q86UW7 1296 aa25.89■■□□□ 1.74
CDC42-204ENST00000411827 CCDC7Q96M83 1385 aa25.89■■□□□ 1.74
CDC42-204ENST00000411827 DISP3Q9P2K9 1392 aa25.89■■□□□ 1.74
CDC42-204ENST00000411827 TULP4Q9NRJ4 1543 aa25.88■■□□□ 1.73
CDC42-204ENST00000411827 KIF7Q2M1P5 1343 aa25.88■■□□□ 1.73
CDC42-204ENST00000411827 ATF3P18847 181 aa25.87■■□□□ 1.73
CDC42-204ENST00000411827 ANKARQ7Z5J8 1434 aa25.87■■□□□ 1.73
CDC42-204ENST00000411827 WASHC2AQ641Q2 1341 aa25.86■■□□□ 1.73
CDC42-204ENST00000411827 NALCNQ8IZF0 1738 aa25.85■■□□□ 1.73
CDC42-204ENST00000411827 C11orf95C9JLR9 678 aaPredicted RBP25.84■■□□□ 1.73
CDC42-204ENST00000411827 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
CDC42-204ENST00000411827 IQSEC2Q5JU85 1478 aa25.83■■□□□ 1.73
CDC42-204ENST00000411827 NUDT16Q96DE0 195 aaKnown RBP25.81■■□□□ 1.72
CDC42-204ENST00000411827 CABP2Q9NPB3 220 aa25.81■■□□□ 1.72
CDC42-204ENST00000411827 RBM33Q96EV2 1170 aaKnown RBP25.8■■□□□ 1.72
CDC42-204ENST00000411827 FMN2Q9NZ56 1722 aa25.78■■□□□ 1.72
CDC42-204ENST00000411827 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
CDC42-204ENST00000411827 POLR3GLQ9BT43 218 aa25.76■■□□□ 1.71
CDC42-204ENST00000411827 ATP7BP35670 1465 aa25.76■■□□□ 1.71
CDC42-204ENST00000411827 PLEKHG3A1L390 1219 aa25.75■■□□□ 1.71
CDC42-204ENST00000411827 TERF2IPQ9NYB0 399 aa25.75■■□□□ 1.71
CDC42-204ENST00000411827 ITSN1Q15811 1721 aa25.72■■□□□ 1.71
CDC42-204ENST00000411827 PRR36Q9H6K5 1346 aa25.72■■□□□ 1.71
CDC42-204ENST00000411827 TMC1Q8TDI8 760 aa25.72■■□□□ 1.71
CDC42-204ENST00000411827 ZNF692Q9BU19 519 aaPredicted RBP25.72■■□□□ 1.71
CDC42-204ENST00000411827 MST1RQ04912 1400 aa25.71■■□□□ 1.71
CDC42-204ENST00000411827 PPIP5K1Q6PFW1 1433 aa25.71■■□□□ 1.71
CDC42-204ENST00000411827 HDGFL2Q7Z4V5 671 aaPredicted RBP25.7■■□□□ 1.7
CDC42-204ENST00000411827 CABP1Q9NZU7 370 aa25.7■■□□□ 1.7
CDC42-204ENST00000411827 SLAIN2Q9P270 581 aa25.7■■□□□ 1.7
CDC42-204ENST00000411827 C1orf167Q5SNV9 1468 aa25.7■■□□□ 1.7
CDC42-204ENST00000411827 TOM1O60784 492 aa25.68■■□□□ 1.7
CDC42-204ENST00000411827 SLC12A5Q9H2X9 1139 aa25.68■■□□□ 1.7
CDC42-204ENST00000411827 BRD4O60885 1362 aaPredicted RBP25.68■■□□□ 1.7
CDC42-204ENST00000411827 ANKRD36BQ8N2N9 1353 aa25.68■■□□□ 1.7
CDC42-204ENST00000411827 PHF8Q9UPP1 1060 aa25.67■■□□□ 1.7
CDC42-204ENST00000411827 TOPAZ1Q8N9V7 1692 aa25.67■■□□□ 1.7
CDC42-204ENST00000411827 USP32Q8NFA0 1604 aa25.66■■□□□ 1.7
CDC42-204ENST00000411827 ESCO1Q5FWF5 840 aa25.66■■□□□ 1.7
CDC42-204ENST00000411827 POLR3AO14802 1390 aaPredicted RBP25.66■■□□□ 1.7
CDC42-204ENST00000411827 NUTM2FA1L443 756 aa25.65■■□□□ 1.7
CDC42-204ENST00000411827 DDX10Q13206 875 aaKnown RBP25.65■■□□□ 1.7
CDC42-204ENST00000411827 PANK3Q9H999 370 aa25.64■■□□□ 1.7
CDC42-204ENST00000411827 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
CDC42-204ENST00000411827 NGDNQ8NEJ9 315 aaKnown RBP25.63■■□□□ 1.69
CDC42-204ENST00000411827 MYOM1P52179 1685 aa25.63■■□□□ 1.69
CDC42-204ENST00000411827 KIF1AQ12756 1690 aa25.63■■□□□ 1.69
CDC42-204ENST00000411827 UBAP1LF5GYI3 381 aa25.61■■□□□ 1.69
CDC42-204ENST00000411827 ACEP12821 1306 aa25.61■■□□□ 1.69
CDC42-204ENST00000411827 KNSTRNQ9Y448 316 aa25.59■■□□□ 1.69
CDC42-204ENST00000411827 A0A1W2PP64 1363 aa25.58■■□□□ 1.69
CDC42-204ENST00000411827 KTN1Q86UP2 1357 aaKnown RBP25.58■■□□□ 1.69
CDC42-204ENST00000411827 ORAI2Q96SN7 254 aa25.58■■□□□ 1.69
CDC42-204ENST00000411827 NPHP3Q7Z494 1330 aa25.58■■□□□ 1.69
CDC42-204ENST00000411827 EDC4Q6P2E9 1401 aaKnown RBP25.57■■□□□ 1.68
CDC42-204ENST00000411827 CD163L1Q9NR16 1453 aa25.57■■□□□ 1.68
CDC42-204ENST00000411827 PSME1Q06323 249 aa25.56■■□□□ 1.68
CDC42-204ENST00000411827 BRINP3Q76B58 766 aa25.56■■□□□ 1.68
CDC42-204ENST00000411827 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
CDC42-204ENST00000411827 RGPD8O14715 1765 aaPredicted RBP25.56■■□□□ 1.68
CDC42-204ENST00000411827 PER1O15534 1290 aaPredicted RBP25.55■■□□□ 1.68
CDC42-204ENST00000411827 NPC1L1Q9UHC9 1359 aa25.55■■□□□ 1.68
CDC42-204ENST00000411827 CGNL1Q0VF96 1302 aa25.54■■□□□ 1.68
CDC42-204ENST00000411827 TTC21AQ8NDW8 1320 aa25.54■■□□□ 1.68
CDC42-204ENST00000411827 USP6P35125 1406 aa25.54■■□□□ 1.68
CDC42-204ENST00000411827 CARD14Q9BXL6 1004 aa25.52■■□□□ 1.68
CDC42-204ENST00000411827 NSD2O96028 1365 aa25.52■■□□□ 1.68
CDC42-204ENST00000411827 AKAP12Q02952 1782 aa25.51■■□□□ 1.67
CDC42-204ENST00000411827 FOXO3O43524 673 aa25.51■■□□□ 1.67
CDC42-204ENST00000411827 NSD3Q9BZ95 1437 aa25.5■■□□□ 1.67
CDC42-204ENST00000411827 MON2Q7Z3U7 1717 aa25.49■■□□□ 1.67
CDC42-204ENST00000411827 SSH2Q76I76 1423 aa25.48■■□□□ 1.67
CDC42-204ENST00000411827 ILDR2Q71H61 639 aa25.48■■□□□ 1.67
CDC42-204ENST00000411827 KRT28Q7Z3Y7 464 aa25.48■■□□□ 1.67
CDC42-204ENST00000411827 SBNO1A3KN83 1393 aa25.47■■□□□ 1.67
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