RNA–Protein interactions for RNA: ENST00000411577.5

ERGIC3-204, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 601 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-204ENST00000411577 ASXL1Q8IXJ9 1541 aa13.24□□□□□ -0.29
ERGIC3-204ENST00000411577 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
ERGIC3-204ENST00000411577 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
ERGIC3-204ENST00000411577 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
ERGIC3-204ENST00000411577 UPF1Q92900 1129 aaKnown RBP eCLIP13.23□□□□□ -0.29
ERGIC3-204ENST00000411577 MST1RQ04912 1400 aa13.22□□□□□ -0.29
ERGIC3-204ENST00000411577 BRINP3Q76B58 766 aa13.22□□□□□ -0.29
ERGIC3-204ENST00000411577 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
ERGIC3-204ENST00000411577 PLEKHH1Q9ULM0 1364 aa13.21□□□□□ -0.29
ERGIC3-204ENST00000411577 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.29
ERGIC3-204ENST00000411577 ADGRB1O14514 1584 aa13.21□□□□□ -0.29
ERGIC3-204ENST00000411577 DLC1Q96QB1 1528 aa13.21□□□□□ -0.29
ERGIC3-204ENST00000411577 SRCAPQ6ZRS2 3230 aa13.2□□□□□ -0.3
ERGIC3-204ENST00000411577 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
ERGIC3-204ENST00000411577 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
ERGIC3-204ENST00000411577 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
ERGIC3-204ENST00000411577 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERGIC3-204ENST00000411577 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
ERGIC3-204ENST00000411577 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
ERGIC3-204ENST00000411577 ORAI2Q96SN7 254 aa13.17□□□□□ -0.3
ERGIC3-204ENST00000411577 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
ERGIC3-204ENST00000411577 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
ERGIC3-204ENST00000411577 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-204ENST00000411577 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
ERGIC3-204ENST00000411577 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
ERGIC3-204ENST00000411577 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.3
ERGIC3-204ENST00000411577 JCADQ9P266 1359 aa13.15□□□□□ -0.3
ERGIC3-204ENST00000411577 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-204ENST00000411577 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
ERGIC3-204ENST00000411577 WASLO00401 505 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-204ENST00000411577 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-204ENST00000411577 ROCK2O75116 1388 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-204ENST00000411577 EIF3AQ14152 1382 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-204ENST00000411577 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-204ENST00000411577 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-204ENST00000411577 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
ERGIC3-204ENST00000411577 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-204ENST00000411577 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-204ENST00000411577 FOXO3O43524 673 aa13.11□□□□□ -0.31
ERGIC3-204ENST00000411577 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-204ENST00000411577 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
ERGIC3-204ENST00000411577 ANKARQ7Z5J8 1434 aa13.11□□□□□ -0.31
ERGIC3-204ENST00000411577 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
ERGIC3-204ENST00000411577 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
ERGIC3-204ENST00000411577 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
ERGIC3-204ENST00000411577 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
ERGIC3-204ENST00000411577 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
ERGIC3-204ENST00000411577 PSME1Q06323 249 aa13.09□□□□□ -0.31
ERGIC3-204ENST00000411577 ADGRB2O60241 1585 aa13.08□□□□□ -0.32
ERGIC3-204ENST00000411577 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
ERGIC3-204ENST00000411577 COL16A1Q07092 1604 aaPredicted RBP13.08□□□□□ -0.32
ERGIC3-204ENST00000411577 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
ERGIC3-204ENST00000411577 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
ERGIC3-204ENST00000411577 TRPM1Q7Z4N2 1603 aa13.06□□□□□ -0.32
ERGIC3-204ENST00000411577 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
ERGIC3-204ENST00000411577 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
ERGIC3-204ENST00000411577 PRR36Q9H6K5 1346 aa13.06□□□□□ -0.32
ERGIC3-204ENST00000411577 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
ERGIC3-204ENST00000411577 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-204ENST00000411577 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
ERGIC3-204ENST00000411577 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-204ENST00000411577 XPCQ01831 940 aaPredicted RBP13.05□□□□□ -0.32
ERGIC3-204ENST00000411577 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
ERGIC3-204ENST00000411577 EVC2Q86UK5 1308 aa13.05□□□□□ -0.32
ERGIC3-204ENST00000411577 TULP4Q9NRJ4 1543 aa13.04□□□□□ -0.32
ERGIC3-204ENST00000411577 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
ERGIC3-204ENST00000411577 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-204ENST00000411577 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-204ENST00000411577 PNPLA6Q8IY17 1366 aa13.04□□□□□ -0.32
ERGIC3-204ENST00000411577 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
ERGIC3-204ENST00000411577 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-204ENST00000411577 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-204ENST00000411577 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-204ENST00000411577 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
ERGIC3-204ENST00000411577 RXRBP28702 533 aa13.02□□□□□ -0.33
ERGIC3-204ENST00000411577 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
ERGIC3-204ENST00000411577 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
ERGIC3-204ENST00000411577 PXDNQ92626 1479 aa13.02□□□□□ -0.33
ERGIC3-204ENST00000411577 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
ERGIC3-204ENST00000411577 SBNO2Q9Y2G9 1366 aa13.01□□□□□ -0.33
ERGIC3-204ENST00000411577 SHPRHQ149N8 1683 aa13□□□□□ -0.33
ERGIC3-204ENST00000411577 ATP7BP35670 1465 aa12.99□□□□□ -0.33
ERGIC3-204ENST00000411577 PUS7Q96PZ0 661 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-204ENST00000411577 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
ERGIC3-204ENST00000411577 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
ERGIC3-204ENST00000411577 ACEP12821 1306 aa12.98□□□□□ -0.33
ERGIC3-204ENST00000411577 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
ERGIC3-204ENST00000411577 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
ERGIC3-204ENST00000411577 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
ERGIC3-204ENST00000411577 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
ERGIC3-204ENST00000411577 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-204ENST00000411577 LRP6O75581 1613 aa12.97□□□□□ -0.33
ERGIC3-204ENST00000411577 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.33
ERGIC3-204ENST00000411577 ATAD2Q6PL18 1390 aa12.96□□□□□ -0.33
ERGIC3-204ENST00000411577 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-204ENST00000411577 ADAMTS2O95450 1211 aa12.96□□□□□ -0.33
ERGIC3-204ENST00000411577 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-204ENST00000411577 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.34
ERGIC3-204ENST00000411577 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.34
ERGIC3-204ENST00000411577 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms