RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 PRAM1Q96QH2 718 aa20.35■□□□□ 0.85
LIMS2-209ENST00000410038 NALCNQ8IZF0 1738 aa20.33■□□□□ 0.85
LIMS2-209ENST00000410038 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.33■□□□□ 0.85
LIMS2-209ENST00000410038 PIP4K2BP78356 416 aa20.32■□□□□ 0.84
LIMS2-209ENST00000410038 POGKQ9P215 609 aa20.32■□□□□ 0.84
LIMS2-209ENST00000410038 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
LIMS2-209ENST00000410038 NCOA3Q9Y6Q9 1424 aa20.31■□□□□ 0.84
LIMS2-209ENST00000410038 SAFB2Q14151 953 aaKnown RBP eCLIP20.31■□□□□ 0.84
LIMS2-209ENST00000410038 EIF3AQ14152 1382 aaKnown RBP20.31■□□□□ 0.84
LIMS2-209ENST00000410038 USP47Q96K76 1375 aa20.31■□□□□ 0.84
LIMS2-209ENST00000410038 HSPA1LP34931 641 aa20.3■□□□□ 0.84
LIMS2-209ENST00000410038 CENPJQ9HC77 1338 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-209ENST00000410038 ADGRL3Q9HAR2 1447 aa20.28■□□□□ 0.84
LIMS2-209ENST00000410038 C14orf37Q86TY3 774 aa20.27■□□□□ 0.84
LIMS2-209ENST00000410038 ST20-MTHFSA0A0A6YYL1 179 aa20.26■□□□□ 0.83
LIMS2-209ENST00000410038 MED1Q15648 1581 aaPredicted RBP20.25■□□□□ 0.83
LIMS2-209ENST00000410038 MINK1Q8N4C8 1332 aaPredicted RBP20.25■□□□□ 0.83
LIMS2-209ENST00000410038 ADGRB2O60241 1585 aa20.25■□□□□ 0.83
LIMS2-209ENST00000410038 C19orf44Q9H6X5 657 aa20.25■□□□□ 0.83
LIMS2-209ENST00000410038 MSH6P52701 1360 aa20.24■□□□□ 0.83
LIMS2-209ENST00000410038 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
LIMS2-209ENST00000410038 HIRIP3Q9BW71 556 aaPredicted RBP20.23■□□□□ 0.83
LIMS2-209ENST00000410038 CDC42BPGQ6DT37 1551 aa20.23■□□□□ 0.83
LIMS2-209ENST00000410038 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
LIMS2-209ENST00000410038 SBNO2Q9Y2G9 1366 aa20.22■□□□□ 0.83
LIMS2-209ENST00000410038 DCCP43146 1447 aa20.21■□□□□ 0.83
LIMS2-209ENST00000410038 TESK2Q96S53 571 aa20.2■□□□□ 0.82
LIMS2-209ENST00000410038 FMN2Q9NZ56 1722 aa20.2■□□□□ 0.82
LIMS2-209ENST00000410038 TULP4Q9NRJ4 1543 aa20.19■□□□□ 0.82
LIMS2-209ENST00000410038 ATF3P18847 181 aa20.18■□□□□ 0.82
LIMS2-209ENST00000410038 CADPS2Q86UW7 1296 aa20.17■□□□□ 0.82
LIMS2-209ENST00000410038 RGPD8O14715 1765 aaPredicted RBP20.17■□□□□ 0.82
LIMS2-209ENST00000410038 WASLO00401 505 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-209ENST00000410038 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
LIMS2-209ENST00000410038 MST1RQ04912 1400 aa20.14■□□□□ 0.81
LIMS2-209ENST00000410038 USP32Q8NFA0 1604 aa20.14■□□□□ 0.81
LIMS2-209ENST00000410038 EVC2Q86UK5 1308 aa20.14■□□□□ 0.81
LIMS2-209ENST00000410038 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
LIMS2-209ENST00000410038 NUTM2FA1L443 756 aa20.13■□□□□ 0.81
LIMS2-209ENST00000410038 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
LIMS2-209ENST00000410038 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
LIMS2-209ENST00000410038 SRPK2P78362 688 aaKnown RBP20.1■□□□□ 0.81
LIMS2-209ENST00000410038 TMF1P82094 1093 aa20.1■□□□□ 0.81
LIMS2-209ENST00000410038 CABP2Q9NPB3 220 aa20.1■□□□□ 0.81
LIMS2-209ENST00000410038 C1orf167Q5SNV9 1468 aa20.1■□□□□ 0.81
LIMS2-209ENST00000410038 PRR36Q9H6K5 1346 aa20.1■□□□□ 0.81
LIMS2-209ENST00000410038 ANKARQ7Z5J8 1434 aa20.1■□□□□ 0.81
LIMS2-209ENST00000410038 ATP7BP35670 1465 aa20.09■□□□□ 0.81
LIMS2-209ENST00000410038 ITSN1Q15811 1721 aa20.09■□□□□ 0.81
LIMS2-209ENST00000410038 TOPAZ1Q8N9V7 1692 aa20.08■□□□□ 0.8
LIMS2-209ENST00000410038 NUDT16Q96DE0 195 aaKnown RBP20.07■□□□□ 0.8
LIMS2-209ENST00000410038 ROBO1Q9Y6N7 1651 aa20.05■□□□□ 0.8
LIMS2-209ENST00000410038 C11orf95C9JLR9 678 aaPredicted RBP20.05■□□□□ 0.8
LIMS2-209ENST00000410038 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
LIMS2-209ENST00000410038 ESCO1Q5FWF5 840 aa20.04■□□□□ 0.8
LIMS2-209ENST00000410038 PUS7Q96PZ0 661 aaKnown RBP20.04■□□□□ 0.8
LIMS2-209ENST00000410038 CCDC61Q9Y6R9 512 aa20.03■□□□□ 0.8
LIMS2-209ENST00000410038 ATAD2Q6PL18 1390 aa20.03■□□□□ 0.8
LIMS2-209ENST00000410038 CDCA8Q53HL2 280 aa20.03■□□□□ 0.8
LIMS2-209ENST00000410038 BRINP3Q76B58 766 aa20.03■□□□□ 0.8
LIMS2-209ENST00000410038 KIF1AQ12756 1690 aa20.02■□□□□ 0.8
LIMS2-209ENST00000410038 PPIP5K1Q6PFW1 1433 aa20.01■□□□□ 0.79
LIMS2-209ENST00000410038 PHF8Q9UPP1 1060 aa20■□□□□ 0.79
LIMS2-209ENST00000410038 MYOM1P52179 1685 aa20■□□□□ 0.79
LIMS2-209ENST00000410038 PMFBP1Q8TBY8 1022 aa19.99■□□□□ 0.79
LIMS2-209ENST00000410038 CABP1Q9NZU7 370 aa19.99■□□□□ 0.79
LIMS2-209ENST00000410038 NHSL1Q5SYE7 1610 aa19.98■□□□□ 0.79
LIMS2-209ENST00000410038 KIF7Q2M1P5 1343 aa19.98■□□□□ 0.79
LIMS2-209ENST00000410038 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
LIMS2-209ENST00000410038 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
LIMS2-209ENST00000410038 WASHC2AQ641Q2 1341 aa19.96■□□□□ 0.79
LIMS2-209ENST00000410038 TMC1Q8TDI8 760 aa19.96■□□□□ 0.79
LIMS2-209ENST00000410038 SLC12A5Q9H2X9 1139 aa19.96■□□□□ 0.79
LIMS2-209ENST00000410038 AKAP12Q02952 1782 aa19.96■□□□□ 0.79
LIMS2-209ENST00000410038 CCDC7Q96M83 1385 aa19.95■□□□□ 0.78
LIMS2-209ENST00000410038 FOXO3O43524 673 aa19.95■□□□□ 0.78
LIMS2-209ENST00000410038 ACEP12821 1306 aa19.95■□□□□ 0.78
LIMS2-209ENST00000410038 DDX17Q92841 729 aaKnown RBP19.94■□□□□ 0.78
LIMS2-209ENST00000410038 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
LIMS2-209ENST00000410038 POLR3AO14802 1390 aaPredicted RBP19.94■□□□□ 0.78
LIMS2-209ENST00000410038 NINLQ9Y2I6 1382 aa19.94■□□□□ 0.78
LIMS2-209ENST00000410038 NGDNQ8NEJ9 315 aaKnown RBP19.94■□□□□ 0.78
LIMS2-209ENST00000410038 CD163L1Q9NR16 1453 aa19.93■□□□□ 0.78
LIMS2-209ENST00000410038 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
LIMS2-209ENST00000410038 PHLPP1O60346 1717 aa19.92■□□□□ 0.78
LIMS2-209ENST00000410038 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
LIMS2-209ENST00000410038 MON2Q7Z3U7 1717 aa19.91■□□□□ 0.78
LIMS2-209ENST00000410038 PXDNQ92626 1479 aa19.9■□□□□ 0.78
LIMS2-209ENST00000410038 XPCQ01831 940 aaPredicted RBP19.9■□□□□ 0.78
LIMS2-209ENST00000410038 PSME1Q06323 249 aa19.89■□□□□ 0.77
LIMS2-209ENST00000410038 TRPM3Q9HCF6 1732 aaPredicted RBP19.89■□□□□ 0.77
LIMS2-209ENST00000410038 A0A1W2PP64 1363 aa19.88■□□□□ 0.77
LIMS2-209ENST00000410038 KRT28Q7Z3Y7 464 aa19.88■□□□□ 0.77
LIMS2-209ENST00000410038 TERF2IPQ9NYB0 399 aa19.88■□□□□ 0.77
LIMS2-209ENST00000410038 COL16A1Q07092 1604 aaPredicted RBP19.88■□□□□ 0.77
LIMS2-209ENST00000410038 SOS2Q07890 1332 aaPredicted RBP19.88■□□□□ 0.77
LIMS2-209ENST00000410038 ANKRD36BQ8N2N9 1353 aa19.88■□□□□ 0.77
LIMS2-209ENST00000410038 JCADQ9P266 1359 aa19.88■□□□□ 0.77
LIMS2-209ENST00000410038 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
LIMS2-209ENST00000410038 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms