RNA–Protein interactions for RNA: ENST00000409892.5

RAB1A-204, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB1A, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-204ENST00000409892 SYCP1Q15431 976 aa22.18■■□□□ 1.14
RAB1A-204ENST00000409892 TMED8Q6PL24 325 aaPredicted RBP22.18■■□□□ 1.14
RAB1A-204ENST00000409892 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
RAB1A-204ENST00000409892 TICAM2Q86XR7 235 aa22.18■■□□□ 1.14
RAB1A-204ENST00000409892 L3MBTL2Q969R5 705 aa22.18■■□□□ 1.14
RAB1A-204ENST00000409892 SNX21Q969T3 373 aa22.17■■□□□ 1.14
RAB1A-204ENST00000409892 DDX49Q9Y6V7 483 aaKnown RBP22.17■■□□□ 1.14
RAB1A-204ENST00000409892 GTF2A1P52655 376 aaPredicted RBP22.17■■□□□ 1.14
RAB1A-204ENST00000409892 FKBP5Q13451 457 aaPredicted RBP22.17■■□□□ 1.14
RAB1A-204ENST00000409892 DIAPH3Q9NSV4 1193 aa22.17■■□□□ 1.14
RAB1A-204ENST00000409892 SMC4Q9NTJ3 1288 aa22.17■■□□□ 1.14
RAB1A-204ENST00000409892 CFAP65Q6ZU64 1925 aaKnown RBP22.16■■□□□ 1.14
RAB1A-204ENST00000409892 BRMS1Q9HCU9 246 aa22.16■■□□□ 1.14
RAB1A-204ENST00000409892 CTNNA3Q9UI47 895 aa22.16■■□□□ 1.14
RAB1A-204ENST00000409892 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
RAB1A-204ENST00000409892 CEP83Q9Y592 693 aa22.15■■□□□ 1.14
RAB1A-204ENST00000409892 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.15■■□□□ 1.149e-7■■□□□ 12.9
RAB1A-204ENST00000409892 CUX1P39880 1505 aa22.15■■□□□ 1.14
RAB1A-204ENST00000409892 C22orf23Q9BZE7 217 aa22.15■■□□□ 1.14
RAB1A-204ENST00000409892 SPTLC3Q9NUV7 552 aa22.15■■□□□ 1.14
RAB1A-204ENST00000409892 NOLC1Q14978 699 aaKnown RBP eCLIP22.14■■□□□ 1.14
RAB1A-204ENST00000409892 IGHDP01880 384 aa22.14■■□□□ 1.13
RAB1A-204ENST00000409892 NBPF20Q3BBV1 942 aa22.14■■□□□ 1.13
RAB1A-204ENST00000409892 ZSCAN23Q3MJ62 389 aa22.14■■□□□ 1.13
RAB1A-204ENST00000409892 DENND4BO75064 1496 aaPredicted RBP22.13■■□□□ 1.13
RAB1A-204ENST00000409892 TEX14Q8IWB6 1497 aa22.12■■□□□ 1.13
RAB1A-204ENST00000409892 NLRP13Q86W25 1043 aa22.12■■□□□ 1.13
RAB1A-204ENST00000409892 RAD50Q92878 1312 aa22.11■■□□□ 1.13
RAB1A-204ENST00000409892 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
RAB1A-204ENST00000409892 SPINK5Q9NQ38 1064 aaPredicted RBP22.11■■□□□ 1.13
RAB1A-204ENST00000409892 E9PCH4 1651 aa22.11■■□□□ 1.13
RAB1A-204ENST00000409892 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
RAB1A-204ENST00000409892 DHX16O60231 1041 aaKnown RBP22.1■■□□□ 1.13
RAB1A-204ENST00000409892 MLECQ14165 292 aa22.1■■□□□ 1.13
RAB1A-204ENST00000409892 ICE2Q659A1 982 aa22.1■■□□□ 1.13
RAB1A-204ENST00000409892 RSPH14Q9UHP6 348 aa22.1■■□□□ 1.13
RAB1A-204ENST00000409892 FAM177BA6PVY3 158 aa22.1■■□□□ 1.13
RAB1A-204ENST00000409892 CCDC172P0C7W6 258 aa22.1■■□□□ 1.13
RAB1A-204ENST00000409892 SATB1Q01826 763 aa22.1■■□□□ 1.13
RAB1A-204ENST00000409892 CT47A1Q5JQC4 288 aaPredicted RBP22.1■■□□□ 1.13
RAB1A-204ENST00000409892 HSP90AB3PQ58FF7 597 aa22.09■■□□□ 1.13
RAB1A-204ENST00000409892 KRT222Q8N1A0 295 aa22.09■■□□□ 1.13
RAB1A-204ENST00000409892 RASSF4Q9H2L5 321 aa22.08■■□□□ 1.13
RAB1A-204ENST00000409892 RAD51AP2Q09MP3 1159 aa22.08■■□□□ 1.12
RAB1A-204ENST00000409892 CHAF1AQ13111 956 aaPredicted RBP22.08■■□□□ 1.12
RAB1A-204ENST00000409892 SLC26A8Q96RN1 970 aa22.07■■□□□ 1.12
RAB1A-204ENST00000409892 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
RAB1A-204ENST00000409892 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.06■■□□□ 1.12
RAB1A-204ENST00000409892 FGD6Q6ZV73 1430 aa22.06■■□□□ 1.12
RAB1A-204ENST00000409892 GUCY2CP25092 1073 aa22.06■■□□□ 1.12
RAB1A-204ENST00000409892 CGNL1Q0VF96 1302 aa22.05■■□□□ 1.12
RAB1A-204ENST00000409892 RPRD2Q5VT52 1461 aaKnown RBP22.05■■□□□ 1.12
RAB1A-204ENST00000409892 PTPRKQ15262 1439 aa22.04■■□□□ 1.12
RAB1A-204ENST00000409892 RIOK3O14730 519 aaKnown RBP22.04■■□□□ 1.12
RAB1A-204ENST00000409892 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
RAB1A-204ENST00000409892 EP400NLQ6ZTU2 488 aa22.04■■□□□ 1.12
RAB1A-204ENST00000409892 ERICH4A6NGS2 130 aa22.03■■□□□ 1.12
RAB1A-204ENST00000409892 DUSP27Q5VZP5 1158 aa22.03■■□□□ 1.12
RAB1A-204ENST00000409892 LRSAM1Q6UWE0 723 aa22.03■■□□□ 1.12
RAB1A-204ENST00000409892 PARD3Q8TEW0 1356 aa22.03■■□□□ 1.12
RAB1A-204ENST00000409892 BAG4O95429 457 aaKnown RBP22.03■■□□□ 1.12
RAB1A-204ENST00000409892 CAVIN1Q6NZI2 390 aaKnown RBP22.03■■□□□ 1.12
RAB1A-204ENST00000409892 FAM43BQ6ZT52 329 aaPredicted RBP22.03■■□□□ 1.12
RAB1A-204ENST00000409892 PLCD4Q9BRC7 762 aa22.03■■□□□ 1.12
RAB1A-204ENST00000409892 TOP2BQ02880 1626 aa22.02■■□□□ 1.12
RAB1A-204ENST00000409892 NCBP1Q09161 790 aaKnown RBP22.02■■□□□ 1.12
RAB1A-204ENST00000409892 CCDC9Q9Y3X0 531 aaKnown RBP22.02■■□□□ 1.12
RAB1A-204ENST00000409892 KIF16BQ96L93 1317 aa22.02■■□□□ 1.12
RAB1A-204ENST00000409892 KDM5CP41229 1560 aa22.02■■□□□ 1.12
RAB1A-204ENST00000409892 CYP2C19P33261 490 aa22.01■■□□□ 1.11
RAB1A-204ENST00000409892 HNRNPH2P55795 449 aaKnown RBP22.01■■□□□ 1.11
RAB1A-204ENST00000409892 KIF18AQ8NI77 898 aa22.01■■□□□ 1.11
RAB1A-204ENST00000409892 FAM53CQ9NYF3 392 aa22.01■■□□□ 1.11
RAB1A-204ENST00000409892 REC8O95072 547 aa22■■□□□ 1.11
RAB1A-204ENST00000409892 USP47Q96K76 1375 aa21.99■■□□□ 1.11
RAB1A-204ENST00000409892 DONSONQ9NYP3 566 aa21.99■■□□□ 1.11
RAB1A-204ENST00000409892 MUM1L1Q5H9M0 696 aa21.98■■□□□ 1.11
RAB1A-204ENST00000409892 CLUAP1Q96AJ1 413 aa21.97■■□□□ 1.11
RAB1A-204ENST00000409892 RAI14Q9P0K7 980 aa21.97■■□□□ 1.11
RAB1A-204ENST00000409892 MTUS2Q5JR59 1369 aa21.97■■□□□ 1.11
RAB1A-204ENST00000409892 KIF1CO43896 1103 aaKnown RBP21.97■■□□□ 1.11
RAB1A-204ENST00000409892 TRERF1Q96PN7 1200 aa21.97■■□□□ 1.11
RAB1A-204ENST00000409892 SSFA2P28290 1259 aa21.96■■□□□ 1.11
RAB1A-204ENST00000409892 CASQ1P31415 396 aa21.96■■□□□ 1.11
RAB1A-204ENST00000409892 PMFBP1Q8TBY8 1022 aa21.96■■□□□ 1.11
RAB1A-204ENST00000409892 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
RAB1A-204ENST00000409892 GOLGA6L6A8MZA4 724 aa21.95■■□□□ 1.1
RAB1A-204ENST00000409892 LMBRD1Q9NUN5 540 aa21.95■■□□□ 1.1
RAB1A-204ENST00000409892 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
RAB1A-204ENST00000409892 SHROOM2Q13796 1616 aa21.94■■□□□ 1.1
RAB1A-204ENST00000409892 CLSTN1O94985 981 aa21.94■■□□□ 1.1
RAB1A-204ENST00000409892 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
RAB1A-204ENST00000409892 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
RAB1A-204ENST00000409892 UHRF1BP1LA0JNW5 1464 aa21.92■■□□□ 1.1
RAB1A-204ENST00000409892 KIF14Q15058 1648 aa21.92■■□□□ 1.1
RAB1A-204ENST00000409892 PCF11O94913 1555 aaKnown RBP21.92■■□□□ 1.1
RAB1A-204ENST00000409892 EPRSP07814 1512 aaKnown RBP21.91■■□□□ 1.1
RAB1A-204ENST00000409892 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
RAB1A-204ENST00000409892 ANKRD30AQ9BXX3 1397 aa21.9■■□□□ 1.1
RAB1A-204ENST00000409892 MNS1Q8NEH6 495 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms