RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ABCC11Q96J66 1382 aa21.77■■□□□ 1.08
CBX3-203ENST00000409747 DDX17Q92841 729 aaKnown RBP21.77■■□□□ 1.08
CBX3-203ENST00000409747 STK26Q9P289 416 aa21.77■■□□□ 1.08
CBX3-203ENST00000409747 NRXN1Q9ULB1 1477 aa21.75■■□□□ 1.07
CBX3-203ENST00000409747 ORAI2Q96SN7 254 aa21.75■■□□□ 1.07
CBX3-203ENST00000409747 YTHDC2Q9H6S0 1430 aaKnown RBP21.74■■□□□ 1.07
CBX3-203ENST00000409747 SOS2Q07890 1332 aaPredicted RBP21.74■■□□□ 1.07
CBX3-203ENST00000409747 TMEM132EQ6IEE7 984 aa21.73■■□□□ 1.07
CBX3-203ENST00000409747 C14orf93Q9H972 538 aaKnown RBP21.72■■□□□ 1.07
CBX3-203ENST00000409747 NPHP3Q7Z494 1330 aa21.71■■□□□ 1.07
CBX3-203ENST00000409747 WAPLQ7Z5K2 1190 aa21.71■■□□□ 1.07
CBX3-203ENST00000409747 ESCO1Q5FWF5 840 aa21.7■■□□□ 1.06
CBX3-203ENST00000409747 AFF2P51816 1311 aa21.7■■□□□ 1.06
CBX3-203ENST00000409747 HRCP23327 699 aa21.69■■□□□ 1.06
CBX3-203ENST00000409747 SIRT1Q96EB6 747 aa21.69■■□□□ 1.06
CBX3-203ENST00000409747 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
CBX3-203ENST00000409747 FMN2Q9NZ56 1722 aa21.68■■□□□ 1.06
CBX3-203ENST00000409747 C8orf37Q96NL8 207 aa21.68■■□□□ 1.06
CBX3-203ENST00000409747 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
CBX3-203ENST00000409747 COL22A1Q8NFW1 1626 aaPredicted RBP21.68■■□□□ 1.06
CBX3-203ENST00000409747 RXRBP28702 533 aa21.67■■□□□ 1.06
CBX3-203ENST00000409747 CDK12Q9NYV4 1490 aaPredicted RBP21.67■■□□□ 1.06
CBX3-203ENST00000409747 CFAP70Q5T0N1 1121 aa21.66■■□□□ 1.06
CBX3-203ENST00000409747 KIF1AQ12756 1690 aa21.66■■□□□ 1.06
CBX3-203ENST00000409747 PXDNQ92626 1479 aa21.65■■□□□ 1.06
CBX3-203ENST00000409747 DLC1Q96QB1 1528 aa21.63■■□□□ 1.05
CBX3-203ENST00000409747 ADAMTS2O95450 1211 aa21.63■■□□□ 1.05
CBX3-203ENST00000409747 NUTM2FA1L443 756 aa21.62■■□□□ 1.05
CBX3-203ENST00000409747 FOXO3O43524 673 aa21.62■■□□□ 1.05
CBX3-203ENST00000409747 STAC3Q96MF2 364 aa21.62■■□□□ 1.05
CBX3-203ENST00000409747 NGLY1Q96IV0 654 aa21.61■■□□□ 1.05
CBX3-203ENST00000409747 ADGRB1O14514 1584 aa21.59■■□□□ 1.05
CBX3-203ENST00000409747 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
CBX3-203ENST00000409747 RBM6P78332 1123 aaKnown RBP21.58■■□□□ 1.05
CBX3-203ENST00000409747 QTRT2Q9H974 415 aaKnown RBP21.58■■□□□ 1.05
CBX3-203ENST00000409747 POGKQ9P215 609 aa21.58■■□□□ 1.04
CBX3-203ENST00000409747 ADGRB2O60241 1585 aa21.57■■□□□ 1.04
CBX3-203ENST00000409747 XPCQ01831 940 aaPredicted RBP21.57■■□□□ 1.04
CBX3-203ENST00000409747 DCAF11Q8TEB1 546 aa21.57■■□□□ 1.04
CBX3-203ENST00000409747 MARF1Q9Y4F3 1742 aaKnown RBP21.56■■□□□ 1.04
CBX3-203ENST00000409747 USP21Q9UK80 565 aa21.55■■□□□ 1.04
CBX3-203ENST00000409747 KDM2AQ9Y2K7 1162 aa21.55■■□□□ 1.04
CBX3-203ENST00000409747 RGPD8O14715 1765 aaPredicted RBP21.54■■□□□ 1.04
CBX3-203ENST00000409747 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
CBX3-203ENST00000409747 SAFB2Q14151 953 aaKnown RBP eCLIP21.54■■□□□ 1.04
CBX3-203ENST00000409747 FNBP4Q8N3X1 1017 aaPredicted RBP21.54■■□□□ 1.04
CBX3-203ENST00000409747 RGS12O14924 1447 aa21.53■■□□□ 1.04
CBX3-203ENST00000409747 PHF8Q9UPP1 1060 aa21.53■■□□□ 1.04
CBX3-203ENST00000409747 TRPC5Q9UL62 973 aaPredicted RBP21.52■■□□□ 1.04
CBX3-203ENST00000409747 SPATA31A3Q5VYP0 1347 aa21.52■■□□□ 1.04
CBX3-203ENST00000409747 EIF3AQ14152 1382 aaKnown RBP21.52■■□□□ 1.04
CBX3-203ENST00000409747 PSME1Q06323 249 aa21.52■■□□□ 1.03
CBX3-203ENST00000409747 KRT28Q7Z3Y7 464 aa21.51■■□□□ 1.03
CBX3-203ENST00000409747 UPF1Q92900 1129 aaKnown RBP eCLIP21.51■■□□□ 1.031e-20■□□□□ 9.9
CBX3-203ENST00000409747 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
CBX3-203ENST00000409747 TNS3Q68CZ2 1445 aa21.49■■□□□ 1.03
CBX3-203ENST00000409747 ATRNO75882 1429 aa21.49■■□□□ 1.03
CBX3-203ENST00000409747 USP32Q8NFA0 1604 aa21.49■■□□□ 1.03
CBX3-203ENST00000409747 SBNO1A3KN83 1393 aa21.47■■□□□ 1.03
CBX3-203ENST00000409747 TULP4Q9NRJ4 1543 aa21.46■■□□□ 1.03
CBX3-203ENST00000409747 ARHGEF28Q8N1W1 1705 aaKnown RBP21.45■■□□□ 1.02
CBX3-203ENST00000409747 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.45■■□□□ 1.02
CBX3-203ENST00000409747 ARHGEF10O15013 1369 aa21.45■■□□□ 1.02
CBX3-203ENST00000409747 MINK1Q8N4C8 1332 aaPredicted RBP21.44■■□□□ 1.02
CBX3-203ENST00000409747 KIAA1210Q9ULL0 1709 aa21.44■■□□□ 1.02
CBX3-203ENST00000409747 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
CBX3-203ENST00000409747 HAP1P54257 671 aaPredicted RBP21.43■■□□□ 1.02
CBX3-203ENST00000409747 HIRIP3Q9BW71 556 aaPredicted RBP21.43■■□□□ 1.02
CBX3-203ENST00000409747 WASLO00401 505 aaPredicted RBP21.41■■□□□ 1.02
CBX3-203ENST00000409747 PMFBP1Q8TBY8 1022 aa21.41■■□□□ 1.02
CBX3-203ENST00000409747 ATAD2Q6PL18 1390 aa21.41■■□□□ 1.02
CBX3-203ENST00000409747 SLIT2O94813 1529 aa21.41■■□□□ 1.02
CBX3-203ENST00000409747 ABCA3Q99758 1704 aa21.4■■□□□ 1.02
CBX3-203ENST00000409747 GPRASP1Q5JY77 1395 aa21.4■■□□□ 1.02
CBX3-203ENST00000409747 ITSN1Q15811 1721 aa21.4■■□□□ 1.02
CBX3-203ENST00000409747 LMOD2Q6P5Q4 547 aa21.39■■□□□ 1.01
CBX3-203ENST00000409747 TRPM3Q9HCF6 1732 aaPredicted RBP21.39■■□□□ 1.01
CBX3-203ENST00000409747 UNC5CLQ8IV45 518 aa21.38■■□□□ 1.01
CBX3-203ENST00000409747 GJD4Q96KN9 370 aaPredicted RBP21.38■■□□□ 1.01
CBX3-203ENST00000409747 PRR36Q9H6K5 1346 aa21.37■■□□□ 1.01
CBX3-203ENST00000409747 NWD2Q9ULI1 1742 aa21.37■■□□□ 1.01
CBX3-203ENST00000409747 PLCH1Q4KWH8 1693 aa21.36■■□□□ 1.01
CBX3-203ENST00000409747 ALS2Q96Q42 1657 aa21.35■■□□□ 1.01
CBX3-203ENST00000409747 CABLES1Q8TDN4 633 aa21.35■■□□□ 1.01
CBX3-203ENST00000409747 ATP7BP35670 1465 aa21.35■■□□□ 1.01
CBX3-203ENST00000409747 NGDNQ8NEJ9 315 aaKnown RBP21.34■■□□□ 1.01
CBX3-203ENST00000409747 RALGAPBQ86X10 1494 aa21.33■■□□□ 1.01
CBX3-203ENST00000409747 GLI3P10071 1580 aa21.32■■□□□ 1
CBX3-203ENST00000409747 PLEKHG5O94827 1062 aa21.32■■□□□ 1
CBX3-203ENST00000409747 EP400Q96L91 3159 aa21.3■■□□□ 1
CBX3-203ENST00000409747 NUDT16Q96DE0 195 aaKnown RBP21.3■■□□□ 1
CBX3-203ENST00000409747 TOPAZ1Q8N9V7 1692 aa21.29■■□□□ 1
CBX3-203ENST00000409747 VPS72Q15906 364 aa21.29■■□□□ 1
CBX3-203ENST00000409747 CDK19Q9BWU1 502 aa21.28■■□□□ 1
CBX3-203ENST00000409747 COL14A1Q05707 1796 aaKnown RBP21.27■■□□□ 1
CBX3-203ENST00000409747 PAK3O75914 559 aaPredicted RBP21.27■■□□□ 1
CBX3-203ENST00000409747 CRYBG1Q9Y4K1 1723 aa21.27■■□□□ 1
CBX3-203ENST00000409747 NBPF1Q3BBV0 1214 aa21.26■□□□□ 0.99
CBX3-203ENST00000409747 CCDC125Q86Z20 511 aa21.26■□□□□ 0.99
CBX3-203ENST00000409747 NRAPQ86VF7 1730 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms