RNA–Protein interactions for RNA: ENST00000409545.2

C2orf88-203, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 3

Gene C2orf88, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-203ENST00000409545 Q3C1V9 767 aa11.49□□□□□ -0.57
C2orf88-203ENST00000409545 FAM160A2Q8N612 972 aaPredicted RBP11.49□□□□□ -0.57
C2orf88-203ENST00000409545 TBC1D2Q9BYX2 928 aa11.49□□□□□ -0.57
C2orf88-203ENST00000409545 FDX1P10109 184 aa11.47□□□□□ -0.57
C2orf88-203ENST00000409545 SYMPKQ92797 1274 aaKnown RBP11.47□□□□□ -0.57
C2orf88-203ENST00000409545 RSF1Q96T23 1441 aaPredicted RBP11.46□□□□□ -0.57
C2orf88-203ENST00000409545 KDM4CQ9H3R0 1056 aa11.46□□□□□ -0.57
C2orf88-203ENST00000409545 PCDHGC3Q9UN70 934 aa11.46□□□□□ -0.57
C2orf88-203ENST00000409545 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
C2orf88-203ENST00000409545 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
C2orf88-203ENST00000409545 PRDM9Q9NQV7 894 aa11.45□□□□□ -0.58
C2orf88-203ENST00000409545 ANKLE1Q8NAG6 615 aa11.44□□□□□ -0.58
C2orf88-203ENST00000409545 USB1Q9BQ65 265 aaKnown RBP11.44□□□□□ -0.58
C2orf88-203ENST00000409545 PRKD2Q9BZL6 878 aa11.44□□□□□ -0.58
C2orf88-203ENST00000409545 MSS51Q4VC12 460 aa11.42□□□□□ -0.58
C2orf88-203ENST00000409545 C6orf229H3BNL8 230 aa11.41□□□□□ -0.58
C2orf88-203ENST00000409545 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
C2orf88-203ENST00000409545 RSBN1LQ6PCB5 846 aaPredicted RBP11.41□□□□□ -0.58
C2orf88-203ENST00000409545 RIC3Q7Z5B4 369 aa11.4□□□□□ -0.58
C2orf88-203ENST00000409545 FAM117AQ9C073 453 aa11.4□□□□□ -0.58
C2orf88-203ENST00000409545 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
C2orf88-203ENST00000409545 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
C2orf88-203ENST00000409545 BAZ1AQ9NRL2 1556 aaPredicted RBP11.39□□□□□ -0.59
C2orf88-203ENST00000409545 UNC13AQ9UPW8 1703 aa11.39□□□□□ -0.59
C2orf88-203ENST00000409545 PCDHB15Q9Y5E8 787 aa11.39□□□□□ -0.59
C2orf88-203ENST00000409545 SPTLC1O15269 473 aa11.38□□□□□ -0.59
C2orf88-203ENST00000409545 PLA2G2CQ5R387 149 aa11.38□□□□□ -0.59
C2orf88-203ENST00000409545 EMID1Q96A84 441 aaPredicted RBP11.38□□□□□ -0.59
C2orf88-203ENST00000409545 FCF1Q9Y324 198 aaKnown RBP11.38□□□□□ -0.59
C2orf88-203ENST00000409545 V9GY48 417 aaPredicted RBP11.38□□□□□ -0.59
C2orf88-203ENST00000409545 GJA5P36382 358 aa11.37□□□□□ -0.59
C2orf88-203ENST00000409545 RETREG3Q86VR2 466 aa11.37□□□□□ -0.59
C2orf88-203ENST00000409545 SLC19A1P41440 591 aa11.36□□□□□ -0.59
C2orf88-203ENST00000409545 MMP16P51512 607 aa11.36□□□□□ -0.59
C2orf88-203ENST00000409545 CSPP1Q1MSJ5 1256 aa11.36□□□□□ -0.59
C2orf88-203ENST00000409545 LIAT1Q6ZQX7 453 aa11.36□□□□□ -0.59
C2orf88-203ENST00000409545 LIMD1Q9UGP4 676 aa11.36□□□□□ -0.59
C2orf88-203ENST00000409545 MTMR2Q13614 643 aa11.35□□□□□ -0.59
C2orf88-203ENST00000409545 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
C2orf88-203ENST00000409545 POLR3EQ9NVU0 708 aa11.35□□□□□ -0.59
C2orf88-203ENST00000409545 DXOO77932 396 aaKnown RBP11.34□□□□□ -0.59
C2orf88-203ENST00000409545 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
C2orf88-203ENST00000409545 BRPF1P55201 1214 aaPredicted RBP11.33□□□□□ -0.6
C2orf88-203ENST00000409545 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
C2orf88-203ENST00000409545 JUNDP17535 347 aa11.32□□□□□ -0.6
C2orf88-203ENST00000409545 HRCP23327 699 aa11.32□□□□□ -0.6
C2orf88-203ENST00000409545 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
C2orf88-203ENST00000409545 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
C2orf88-203ENST00000409545 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
C2orf88-203ENST00000409545 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
C2orf88-203ENST00000409545 SPRYD7Q5W111 196 aa11.31□□□□□ -0.6
C2orf88-203ENST00000409545 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
C2orf88-203ENST00000409545 ZBTB3Q9H5J0 574 aa11.31□□□□□ -0.6
C2orf88-203ENST00000409545 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
C2orf88-203ENST00000409545 QPCTQ16769 361 aa11.29□□□□□ -0.6
C2orf88-203ENST00000409545 PRPF38BQ5VTL8 546 aaKnown RBP11.29□□□□□ -0.6
C2orf88-203ENST00000409545 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
C2orf88-203ENST00000409545 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
C2orf88-203ENST00000409545 NUTM2BA6NNL0 878 aaPredicted RBP11.28□□□□□ -0.6
C2orf88-203ENST00000409545 NUTM2EB1AL46 878 aaPredicted RBP11.28□□□□□ -0.6
C2orf88-203ENST00000409545 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
C2orf88-203ENST00000409545 SKIV2LQ15477 1246 aaKnown RBP11.28□□□□□ -0.6
C2orf88-203ENST00000409545 TUSC1Q2TAM9 212 aa11.28□□□□□ -0.6
C2orf88-203ENST00000409545 NUTM2DQ5VT03 806 aaPredicted RBP11.28□□□□□ -0.6
C2orf88-203ENST00000409545 NUTM2AQ8IVF1 878 aaPredicted RBP11.28□□□□□ -0.6
C2orf88-203ENST00000409545 IL27Q8NEV9 243 aa11.28□□□□□ -0.6
C2orf88-203ENST00000409545 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
C2orf88-203ENST00000409545 SH3D19Q5HYK7 790 aa11.27□□□□□ -0.61
C2orf88-203ENST00000409545 ZNF598Q86UK7 904 aaKnown RBP11.27□□□□□ -0.61
C2orf88-203ENST00000409545 SMARCA4P51532 1647 aa11.27□□□□□ -0.61
C2orf88-203ENST00000409545 BICRAQ9NZM4 1560 aa11.26□□□□□ -0.61
C2orf88-203ENST00000409545 CFAP99D6REC4 459 aa11.26□□□□□ -0.61
C2orf88-203ENST00000409545 LILRB3O75022 631 aa11.26□□□□□ -0.61
C2orf88-203ENST00000409545 RPIAP49247 311 aa11.26□□□□□ -0.61
C2orf88-203ENST00000409545 ZNF697Q5TEC3 545 aa11.26□□□□□ -0.61
C2orf88-203ENST00000409545 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
C2orf88-203ENST00000409545 CECR2Q9BXF3 1484 aa11.25□□□□□ -0.61
C2orf88-203ENST00000409545 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
C2orf88-203ENST00000409545 CD2BP2O95400 341 aaKnown RBP11.24□□□□□ -0.61
C2orf88-203ENST00000409545 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
C2orf88-203ENST00000409545 GFRA3O60609 400 aa11.23□□□□□ -0.61
C2orf88-203ENST00000409545 DESI1Q6ICB0 168 aa11.23□□□□□ -0.61
C2orf88-203ENST00000409545 TSC1Q92574 1164 aa11.23□□□□□ -0.61
C2orf88-203ENST00000409545 TOP2AP11388 1531 aaKnown RBP11.22□□□□□ -0.61
C2orf88-203ENST00000409545 PTCRAQ6ISU1 281 aaPredicted RBP11.22□□□□□ -0.61
C2orf88-203ENST00000409545 EIF4G1Q04637 1599 aaKnown RBP11.21□□□□□ -0.61
C2orf88-203ENST00000409545 CCNYL3P0C7X3 344 aa11.21□□□□□ -0.61
C2orf88-203ENST00000409545 PTPRNQ16849 979 aa11.21□□□□□ -0.61
C2orf88-203ENST00000409545 TRIM67Q6ZTA4 783 aa11.21□□□□□ -0.61
C2orf88-203ENST00000409545 PDZRN3Q9UPQ7 1066 aa11.21□□□□□ -0.61
C2orf88-203ENST00000409545 TRIM32Q13049 653 aa11.2□□□□□ -0.62
C2orf88-203ENST00000409545 LYPD8Q6UX82 237 aa11.2□□□□□ -0.62
C2orf88-203ENST00000409545 FBXO31Q5XUX0 539 aaPredicted RBP11.19□□□□□ -0.62
C2orf88-203ENST00000409545 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.19□□□□□ -0.62
C2orf88-203ENST00000409545 EVA1BQ9NVM1 165 aa11.19□□□□□ -0.62
C2orf88-203ENST00000409545 WIZO95785 1651 aa11.19□□□□□ -0.62
C2orf88-203ENST00000409545 FOXC1Q12948 553 aa11.18□□□□□ -0.62
C2orf88-203ENST00000409545 TNFRSF10AO00220 468 aa11.17□□□□□ -0.62
C2orf88-203ENST00000409545 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
C2orf88-203ENST00000409545 GDF9O60383 454 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms