RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 RLBP1P12271 317 aa14.5□□□□□ -0.09
ITGA6-203ENST00000409532 VWDEQ8N2E2 1590 aa14.5□□□□□ -0.09
ITGA6-203ENST00000409532 SEC24BO95487 1268 aa14.49□□□□□ -0.09
ITGA6-203ENST00000409532 ABCA9Q8IUA7 1624 aa14.49□□□□□ -0.09
ITGA6-203ENST00000409532 PPRC1Q5VV67 1664 aaKnown RBP14.49□□□□□ -0.09
ITGA6-203ENST00000409532 U2SURPO15042 1029 aaKnown RBP14.49□□□□□ -0.09
ITGA6-203ENST00000409532 MYOM2P54296 1465 aa14.49□□□□□ -0.09
ITGA6-203ENST00000409532 CGNL1Q0VF96 1302 aa14.49□□□□□ -0.09
ITGA6-203ENST00000409532 POLR3AO14802 1390 aaPredicted RBP14.49□□□□□ -0.09
ITGA6-203ENST00000409532 EFCAB6Q5THR3 1501 aa14.49□□□□□ -0.09
ITGA6-203ENST00000409532 ARAP3Q8WWN8 1544 aa14.49□□□□□ -0.09
ITGA6-203ENST00000409532 RARSP54136 660 aaKnown RBP14.48□□□□□ -0.09
ITGA6-203ENST00000409532 NPATQ14207 1427 aa14.48□□□□□ -0.09
ITGA6-203ENST00000409532 CFAP53Q96M91 514 aa14.48□□□□□ -0.09
ITGA6-203ENST00000409532 SRPK2P78362 688 aaKnown RBP14.47□□□□□ -0.09
ITGA6-203ENST00000409532 PDE3AQ14432 1141 aa14.47□□□□□ -0.09
ITGA6-203ENST00000409532 GGNBP2Q9H3C7 697 aa14.47□□□□□ -0.09
ITGA6-203ENST00000409532 USP35Q9P2H5 1018 aa14.47□□□□□ -0.09
ITGA6-203ENST00000409532 KIDINS220Q9ULH0 1771 aa14.47□□□□□ -0.09
ITGA6-203ENST00000409532 TSR2Q969E8 191 aaKnown RBP14.47□□□□□ -0.09
ITGA6-203ENST00000409532 PCDHB15Q9Y5E8 787 aa14.46□□□□□ -0.09
ITGA6-203ENST00000409532 KIAA1210Q9ULL0 1709 aa14.46□□□□□ -0.09
ITGA6-203ENST00000409532 FRAT2O75474 233 aaPredicted RBP14.45□□□□□ -0.1
ITGA6-203ENST00000409532 EVC2Q86UK5 1308 aa14.44□□□□□ -0.1
ITGA6-203ENST00000409532 ZNF518AQ6AHZ1 1483 aa14.44□□□□□ -0.1
ITGA6-203ENST00000409532 MINK1Q8N4C8 1332 aaPredicted RBP14.44□□□□□ -0.1
ITGA6-203ENST00000409532 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
ITGA6-203ENST00000409532 NGEFQ8N5V2 710 aa14.43□□□□□ -0.1
ITGA6-203ENST00000409532 SLKQ9H2G2 1235 aaPredicted RBP14.43□□□□□ -0.1
ITGA6-203ENST00000409532 SBNO2Q9Y2G9 1366 aa14.43□□□□□ -0.1
ITGA6-203ENST00000409532 IDI1Q13907 227 aa14.42□□□□□ -0.1
ITGA6-203ENST00000409532 VGFO15240 615 aaPredicted RBP14.42□□□□□ -0.1
ITGA6-203ENST00000409532 GSE1Q14687 1217 aa14.41□□□□□ -0.1
ITGA6-203ENST00000409532 FTSJ3Q8IY81 847 aaKnown RBP14.41□□□□□ -0.1
ITGA6-203ENST00000409532 PDZRN3Q9UPQ7 1066 aa14.41□□□□□ -0.1
ITGA6-203ENST00000409532 FBLN1P23142 703 aa14.41□□□□□ -0.1
ITGA6-203ENST00000409532 QRICH2Q9H0J4 1663 aa14.41□□□□□ -0.1
ITGA6-203ENST00000409532 ADGRB3O60242 1522 aa14.4□□□□□ -0.1
ITGA6-203ENST00000409532 IFT172Q9UG01 1749 aa14.4□□□□□ -0.1
ITGA6-203ENST00000409532 NRXN1Q9ULB1 1477 aa14.4□□□□□ -0.1
ITGA6-203ENST00000409532 WDR63Q8IWG1 891 aa14.4□□□□□ -0.1
ITGA6-203ENST00000409532 SPRYD3Q8NCJ5 442 aa14.4□□□□□ -0.1
ITGA6-203ENST00000409532 EXOSC9Q06265 439 aaKnown RBP14.4□□□□□ -0.1
ITGA6-203ENST00000409532 BRPF3Q9ULD4 1205 aa14.4□□□□□ -0.1
ITGA6-203ENST00000409532 USP19O94966 1318 aa14.4□□□□□ -0.1
ITGA6-203ENST00000409532 POGKQ9P215 609 aa14.39□□□□□ -0.11
ITGA6-203ENST00000409532 MYH16Q9H6N6 1097 aa14.39□□□□□ -0.11
ITGA6-203ENST00000409532 SMC4Q9NTJ3 1288 aa14.39□□□□□ -0.11
ITGA6-203ENST00000409532 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
ITGA6-203ENST00000409532 PMFBP1Q8TBY8 1022 aa14.38□□□□□ -0.11
ITGA6-203ENST00000409532 SHPRHQ149N8 1683 aa14.38□□□□□ -0.11
ITGA6-203ENST00000409532 ADGRB1O14514 1584 aa14.37□□□□□ -0.11
ITGA6-203ENST00000409532 PRAM1Q96QH2 718 aa14.37□□□□□ -0.11
ITGA6-203ENST00000409532 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
ITGA6-203ENST00000409532 RPGRIP1LQ68CZ1 1315 aa14.36□□□□□ -0.11
ITGA6-203ENST00000409532 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
ITGA6-203ENST00000409532 POGZQ7Z3K3 1410 aa14.36□□□□□ -0.11
ITGA6-203ENST00000409532 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
ITGA6-203ENST00000409532 A0A1W2PP64 1363 aa14.36□□□□□ -0.11
ITGA6-203ENST00000409532 ANKRD36BQ8N2N9 1353 aa14.36□□□□□ -0.11
ITGA6-203ENST00000409532 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.36□□□□□ -0.11
ITGA6-203ENST00000409532 DZIP1LQ8IYY4 767 aaKnown RBP14.36□□□□□ -0.11
ITGA6-203ENST00000409532 RWDD1Q9H446 243 aaPredicted RBP14.36□□□□□ -0.11
ITGA6-203ENST00000409532 PPLO60437 1756 aa14.35□□□□□ -0.11
ITGA6-203ENST00000409532 FBXO31Q5XUX0 539 aaPredicted RBP14.35□□□□□ -0.11
ITGA6-203ENST00000409532 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
ITGA6-203ENST00000409532 FRMPD1Q5SYB0 1578 aa14.35□□□□□ -0.11
ITGA6-203ENST00000409532 NEURL4Q96JN8 1562 aa14.35□□□□□ -0.11
ITGA6-203ENST00000409532 MYO3AQ8NEV4 1616 aa14.35□□□□□ -0.11
ITGA6-203ENST00000409532 TMPOP42166 694 aaKnown RBP14.35□□□□□ -0.11
ITGA6-203ENST00000409532 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
ITGA6-203ENST00000409532 MVPQ14764 893 aaKnown RBP14.35□□□□□ -0.11
ITGA6-203ENST00000409532 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
ITGA6-203ENST00000409532 RIPK4P57078 832 aa14.34□□□□□ -0.11
ITGA6-203ENST00000409532 SSH1Q8WYL5 1049 aa14.34□□□□□ -0.11
ITGA6-203ENST00000409532 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
ITGA6-203ENST00000409532 LMTK2Q8IWU2 1503 aa14.34□□□□□ -0.11
ITGA6-203ENST00000409532 TULP4Q9NRJ4 1543 aa14.34□□□□□ -0.11
ITGA6-203ENST00000409532 FYB1O15117 783 aa14.33□□□□□ -0.11
ITGA6-203ENST00000409532 UPF2Q9HAU5 1272 aaKnown RBP14.33□□□□□ -0.11
ITGA6-203ENST00000409532 IQSEC2Q5JU85 1478 aa14.33□□□□□ -0.12
ITGA6-203ENST00000409532 ARXQ96QS3 562 aa14.33□□□□□ -0.12
ITGA6-203ENST00000409532 GLI2P10070 1586 aa14.33□□□□□ -0.12
ITGA6-203ENST00000409532 ABCC3O15438 1527 aa14.33□□□□□ -0.12
ITGA6-203ENST00000409532 TRIM27P14373 513 aa14.33□□□□□ -0.12
ITGA6-203ENST00000409532 CCDC27Q2M243 656 aa14.32□□□□□ -0.12
ITGA6-203ENST00000409532 TRIM35Q9UPQ4 493 aa14.32□□□□□ -0.12
ITGA6-203ENST00000409532 CABP1Q9NZU7 370 aa14.32□□□□□ -0.12
ITGA6-203ENST00000409532 NOB1Q9ULX3 412 aaKnown RBP14.32□□□□□ -0.12
ITGA6-203ENST00000409532 BECN1Q14457 450 aa14.32□□□□□ -0.12
ITGA6-203ENST00000409532 MFAP1P55081 439 aaKnown RBP14.31□□□□□ -0.12
ITGA6-203ENST00000409532 TERF2IPQ9NYB0 399 aa14.31□□□□□ -0.12
ITGA6-203ENST00000409532 MLH3Q9UHC1 1453 aa14.3□□□□□ -0.12
ITGA6-203ENST00000409532 ELL2O00472 640 aaPredicted RBP14.3□□□□□ -0.12
ITGA6-203ENST00000409532 SIGLEC1Q9BZZ2 1709 aa14.3□□□□□ -0.12
ITGA6-203ENST00000409532 HMOX1P09601 288 aa14.3□□□□□ -0.12
ITGA6-203ENST00000409532 PLEKHF1Q96S99 279 aa14.3□□□□□ -0.12
ITGA6-203ENST00000409532 THUMPD2Q9BTF0 503 aaKnown RBP14.3□□□□□ -0.12
ITGA6-203ENST00000409532 ZC3H13Q5T200 1668 aaKnown RBP14.3□□□□□ -0.12
ITGA6-203ENST00000409532 HECW2Q9P2P5 1572 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms