RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
SHANK2-204ENST00000409530 RBM33Q96EV2 1170 aaKnown RBP21.59■■□□□ 1.05
SHANK2-204ENST00000409530 EVC2Q86UK5 1308 aa21.59■■□□□ 1.05
SHANK2-204ENST00000409530 XRN1Q8IZH2 1706 aaKnown RBP21.59■■□□□ 1.05
SHANK2-204ENST00000409530 KCNA6P17658 529 aa21.59■■□□□ 1.05
SHANK2-204ENST00000409530 TECPR2O15040 1411 aa21.59■■□□□ 1.05
SHANK2-204ENST00000409530 ANP32CO43423 234 aa21.56■■□□□ 1.04
SHANK2-204ENST00000409530 CHD2O14647 1828 aaKnown RBP21.56■■□□□ 1.04
SHANK2-204ENST00000409530 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.55■■□□□ 1.04
SHANK2-204ENST00000409530 PANK3Q9H999 370 aa21.55■■□□□ 1.04
SHANK2-204ENST00000409530 NUTM2FA1L443 756 aa21.55■■□□□ 1.04
SHANK2-204ENST00000409530 FAM135BQ49AJ0 1406 aa21.54■■□□□ 1.04
SHANK2-204ENST00000409530 STRCQ7RTU9 1775 aa21.54■■□□□ 1.04
SHANK2-204ENST00000409530 CDK19Q9BWU1 502 aa21.53■■□□□ 1.04
SHANK2-204ENST00000409530 PTCH1Q13635 1447 aa21.52■■□□□ 1.04
SHANK2-204ENST00000409530 SLC24A1O60721 1099 aa21.52■■□□□ 1.03
SHANK2-204ENST00000409530 SLC12A5Q9H2X9 1139 aa21.5■■□□□ 1.03
SHANK2-204ENST00000409530 PIK3R4Q99570 1358 aa21.5■■□□□ 1.03
SHANK2-204ENST00000409530 C14orf37Q86TY3 774 aa21.47■■□□□ 1.03
SHANK2-204ENST00000409530 NALCNQ8IZF0 1738 aa21.47■■□□□ 1.03
SHANK2-204ENST00000409530 WASLO00401 505 aaPredicted RBP21.47■■□□□ 1.03
SHANK2-204ENST00000409530 CC2D1BQ5T0F9 858 aaKnown RBP21.47■■□□□ 1.03
SHANK2-204ENST00000409530 STRCP1A6NGW2 1772 aa21.45■■□□□ 1.02
SHANK2-204ENST00000409530 SIRT1Q96EB6 747 aa21.44■■□□□ 1.02
SHANK2-204ENST00000409530 ADGRB2O60241 1585 aa21.44■■□□□ 1.02
SHANK2-204ENST00000409530 ATAD2Q6PL18 1390 aa21.44■■□□□ 1.02
SHANK2-204ENST00000409530 NWD1Q149M9 1564 aa21.43■■□□□ 1.02
SHANK2-204ENST00000409530 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
SHANK2-204ENST00000409530 PRKRIP1Q9H875 184 aaPredicted RBP21.42■■□□□ 1.02
SHANK2-204ENST00000409530 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
SHANK2-204ENST00000409530 CABP1Q9NZU7 370 aa21.41■■□□□ 1.02
SHANK2-204ENST00000409530 NSD3Q9BZ95 1437 aa21.41■■□□□ 1.02
SHANK2-204ENST00000409530 PPIP5K1Q6PFW1 1433 aa21.4■■□□□ 1.02
SHANK2-204ENST00000409530 RGPD8O14715 1765 aaPredicted RBP21.4■■□□□ 1.02
SHANK2-204ENST00000409530 PROSER2Q86WR7 435 aaPredicted RBP21.4■■□□□ 1.02
SHANK2-204ENST00000409530 ATP7BP35670 1465 aa21.4■■□□□ 1.02
SHANK2-204ENST00000409530 PRR36Q9H6K5 1346 aa21.4■■□□□ 1.02
SHANK2-204ENST00000409530 PER1O15534 1290 aaPredicted RBP21.4■■□□□ 1.02
SHANK2-204ENST00000409530 NUDT16Q96DE0 195 aaKnown RBP21.4■■□□□ 1.02
SHANK2-204ENST00000409530 A0A1W2PP64 1363 aa21.39■■□□□ 1.02
SHANK2-204ENST00000409530 CARD14Q9BXL6 1004 aa21.39■■□□□ 1.01
SHANK2-204ENST00000409530 KTN1Q86UP2 1357 aaKnown RBP21.38■■□□□ 1.01
SHANK2-204ENST00000409530 USP32Q8NFA0 1604 aa21.37■■□□□ 1.01
SHANK2-204ENST00000409530 ZNF335Q9H4Z2 1342 aaPredicted RBP21.37■■□□□ 1.01
SHANK2-204ENST00000409530 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
SHANK2-204ENST00000409530 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
SHANK2-204ENST00000409530 ADGRL3Q9HAR2 1447 aa21.34■■□□□ 1.01
SHANK2-204ENST00000409530 ITSN1Q15811 1721 aa21.34■■□□□ 1.01
SHANK2-204ENST00000409530 FMN2Q9NZ56 1722 aa21.34■■□□□ 1.01
SHANK2-204ENST00000409530 CD163L1Q9NR16 1453 aa21.34■■□□□ 1.01
SHANK2-204ENST00000409530 TOPAZ1Q8N9V7 1692 aa21.34■■□□□ 1.01
SHANK2-204ENST00000409530 PUS7Q96PZ0 661 aaKnown RBP21.34■■□□□ 1.01
SHANK2-204ENST00000409530 CCDC184Q52MB2 194 aa21.33■■□□□ 1.01
SHANK2-204ENST00000409530 PMFBP1Q8TBY8 1022 aa21.33■■□□□ 1.01
SHANK2-204ENST00000409530 TERF2IPQ9NYB0 399 aa21.33■■□□□ 1.01
SHANK2-204ENST00000409530 TMEM94Q12767 1356 aa21.33■■□□□ 1
SHANK2-204ENST00000409530 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
SHANK2-204ENST00000409530 HDGFL2Q7Z4V5 671 aaPredicted RBP21.32■■□□□ 1
SHANK2-204ENST00000409530 CDC42BPGQ6DT37 1551 aa21.32■■□□□ 1
SHANK2-204ENST00000409530 CCDC61Q9Y6R9 512 aa21.32■■□□□ 1
SHANK2-204ENST00000409530 AMER1Q5JTC6 1135 aaPredicted RBP21.31■■□□□ 1
SHANK2-204ENST00000409530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.31■■□□□ 1
SHANK2-204ENST00000409530 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
SHANK2-204ENST00000409530 MRS2Q9HD23 443 aa21.28■■□□□ 1
SHANK2-204ENST00000409530 PARD3Q8TEW0 1356 aa21.28■■□□□ 1
SHANK2-204ENST00000409530 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
SHANK2-204ENST00000409530 AKAP12Q02952 1782 aa21.27■■□□□ 1
SHANK2-204ENST00000409530 CGNL1Q0VF96 1302 aa21.26■□□□□ 0.99
SHANK2-204ENST00000409530 XIRP1Q702N8 1843 aaKnown RBP21.26■□□□□ 0.99
SHANK2-204ENST00000409530 ACEP12821 1306 aa21.26■□□□□ 0.99
SHANK2-204ENST00000409530 KIF20BQ96Q89 1820 aa21.26■□□□□ 0.99
SHANK2-204ENST00000409530 MYBBP1AQ9BQG0 1328 aaKnown RBP21.25■□□□□ 0.99
SHANK2-204ENST00000409530 CCER2I3L3R5 266 aa21.25■□□□□ 0.99
SHANK2-204ENST00000409530 RALBP1Q15311 655 aa21.25■□□□□ 0.99
SHANK2-204ENST00000409530 GGNBP2Q9H3C7 697 aa21.25■□□□□ 0.99
SHANK2-204ENST00000409530 MON2Q7Z3U7 1717 aa21.25■□□□□ 0.99
SHANK2-204ENST00000409530 NGDNQ8NEJ9 315 aaKnown RBP21.24■□□□□ 0.99
SHANK2-204ENST00000409530 ESCO1Q5FWF5 840 aa21.23■□□□□ 0.99
SHANK2-204ENST00000409530 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
SHANK2-204ENST00000409530 LRRC7Q96NW7 1537 aa21.22■□□□□ 0.99
SHANK2-204ENST00000409530 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
SHANK2-204ENST00000409530 ANKARQ7Z5J8 1434 aa21.22■□□□□ 0.99
SHANK2-204ENST00000409530 MORC1Q86VD1 984 aa21.22■□□□□ 0.99
SHANK2-204ENST00000409530 ATF3P18847 181 aa21.21■□□□□ 0.99
SHANK2-204ENST00000409530 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
SHANK2-204ENST00000409530 C19orf44Q9H6X5 657 aa21.2■□□□□ 0.98
SHANK2-204ENST00000409530 NME9Q86XW9 330 aa21.19■□□□□ 0.98
SHANK2-204ENST00000409530 ORAI2Q96SN7 254 aa21.19■□□□□ 0.98
SHANK2-204ENST00000409530 MSH6P52701 1360 aa21.19■□□□□ 0.98
SHANK2-204ENST00000409530 NRKQ7Z2Y5 1582 aa21.19■□□□□ 0.98
SHANK2-204ENST00000409530 ZRANB1Q9UGI0 708 aa21.19■□□□□ 0.98
SHANK2-204ENST00000409530 EDC4Q6P2E9 1401 aaKnown RBP21.18■□□□□ 0.98
SHANK2-204ENST00000409530 PPP2R1AP30153 589 aa21.17■□□□□ 0.98
SHANK2-204ENST00000409530 XPCQ01831 940 aaPredicted RBP21.17■□□□□ 0.98
SHANK2-204ENST00000409530 PHF8Q9UPP1 1060 aa21.17■□□□□ 0.98
SHANK2-204ENST00000409530 ANKRD26Q9UPS8 1709 aa21.17■□□□□ 0.98
SHANK2-204ENST00000409530 PLEKHG3A1L390 1219 aa21.17■□□□□ 0.98
SHANK2-204ENST00000409530 FYB1O15117 783 aa21.17■□□□□ 0.98
SHANK2-204ENST00000409530 USP6P35125 1406 aa21.17■□□□□ 0.98
SHANK2-204ENST00000409530 NPC1L1Q9UHC9 1359 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms