RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ASXL2Q76L83 1435 aa20.77■□□□□ 0.92
PCDHA13-202ENST00000409494 TATP17735 454 aaPredicted RBP20.77■□□□□ 0.91
PCDHA13-202ENST00000409494 CABP1Q9NZU7 370 aa20.77■□□□□ 0.91
PCDHA13-202ENST00000409494 EIF2S2P20042 333 aaKnown RBP20.76■□□□□ 0.91
PCDHA13-202ENST00000409494 CT47B1P0C2W7 299 aaPredicted RBP20.76■□□□□ 0.91
PCDHA13-202ENST00000409494 RUFY2Q8WXA3 655 aa20.76■□□□□ 0.91
PCDHA13-202ENST00000409494 SLC26A8Q96RN1 970 aa20.76■□□□□ 0.91
PCDHA13-202ENST00000409494 ITSN2Q9NZM3 1697 aa20.76■□□□□ 0.91
PCDHA13-202ENST00000409494 KCNH5Q8NCM2 988 aa20.76■□□□□ 0.91
PCDHA13-202ENST00000409494 SLKQ9H2G2 1235 aaPredicted RBP20.76■□□□□ 0.91
PCDHA13-202ENST00000409494 WDR7Q9Y4E6 1490 aa20.75■□□□□ 0.91
PCDHA13-202ENST00000409494 FKBP5Q13451 457 aaPredicted RBP20.75■□□□□ 0.91
PCDHA13-202ENST00000409494 SLC12A5Q9H2X9 1139 aa20.75■□□□□ 0.91
PCDHA13-202ENST00000409494 USP35Q9P2H5 1018 aa20.75■□□□□ 0.91
PCDHA13-202ENST00000409494 ISY1Q9ULR0 285 aaKnown RBP20.74■□□□□ 0.91
PCDHA13-202ENST00000409494 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
PCDHA13-202ENST00000409494 PLIN1O60240 522 aa20.73■□□□□ 0.91
PCDHA13-202ENST00000409494 ZNF518AQ6AHZ1 1483 aa20.73■□□□□ 0.91
PCDHA13-202ENST00000409494 ST18O60284 1047 aa20.72■□□□□ 0.91
PCDHA13-202ENST00000409494 HMOX1P09601 288 aa20.72■□□□□ 0.91
PCDHA13-202ENST00000409494 CSPP1Q1MSJ5 1256 aa20.72■□□□□ 0.91
PCDHA13-202ENST00000409494 TCP11L2Q8N4U5 519 aa20.72■□□□□ 0.91
PCDHA13-202ENST00000409494 NUP160Q12769 1436 aa20.71■□□□□ 0.91
PCDHA13-202ENST00000409494 CCDC30Q5VVM6 783 aa20.71■□□□□ 0.91
PCDHA13-202ENST00000409494 DUOX2Q9NRD8 1548 aa20.71■□□□□ 0.91
PCDHA13-202ENST00000409494 SYTL4Q96C24 671 aaPredicted RBP20.71■□□□□ 0.91
PCDHA13-202ENST00000409494 FAM135AQ9P2D6 1515 aa20.71■□□□□ 0.91
PCDHA13-202ENST00000409494 NUP153P49790 1475 aaKnown RBP20.7■□□□□ 0.9
PCDHA13-202ENST00000409494 KIAA0556O60303 1618 aa20.7■□□□□ 0.9
PCDHA13-202ENST00000409494 CRBNQ96SW2 442 aa20.7■□□□□ 0.9
PCDHA13-202ENST00000409494 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
PCDHA13-202ENST00000409494 G3BP1Q13283 466 aaKnown RBP eCLIP20.7■□□□□ 0.9
PCDHA13-202ENST00000409494 NUDT16Q96DE0 195 aaKnown RBP20.69■□□□□ 0.9
PCDHA13-202ENST00000409494 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
PCDHA13-202ENST00000409494 NOL10Q9BSC4 688 aaKnown RBP20.69■□□□□ 0.9
PCDHA13-202ENST00000409494 ADAMTS8Q9UP79 889 aa20.69■□□□□ 0.9
PCDHA13-202ENST00000409494 IDI1Q13907 227 aa20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 FAM161AQ3B820 660 aa20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 ZNF428Q96B54 188 aa20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 BCL2L13Q9BXK5 485 aa20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 GNAI3P08754 354 aa20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 PRKAR2BP31323 418 aa20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 SYAP1Q96A49 352 aaPredicted RBP20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 NINLQ9Y2I6 1382 aa20.68■□□□□ 0.9
PCDHA13-202ENST00000409494 DNTTIP2Q5QJE6 756 aaKnown RBP20.67■□□□□ 0.9
PCDHA13-202ENST00000409494 COG6Q9Y2V7 657 aa20.67■□□□□ 0.9
PCDHA13-202ENST00000409494 ABCC10Q5T3U5 1492 aa20.67■□□□□ 0.9
PCDHA13-202ENST00000409494 NUTM2GQ5VZR2 741 aa20.67■□□□□ 0.9
PCDHA13-202ENST00000409494 MFAP1P55081 439 aaKnown RBP20.66■□□□□ 0.9
PCDHA13-202ENST00000409494 WDR63Q8IWG1 891 aa20.66■□□□□ 0.9
PCDHA13-202ENST00000409494 AMOTL1Q8IY63 956 aa20.66■□□□□ 0.9
PCDHA13-202ENST00000409494 REC8O95072 547 aa20.66■□□□□ 0.9
PCDHA13-202ENST00000409494 A2MP01023 1474 aa20.66■□□□□ 0.9
PCDHA13-202ENST00000409494 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
PCDHA13-202ENST00000409494 RIC3Q7Z5B4 369 aa20.65■□□□□ 0.9
PCDHA13-202ENST00000409494 IFIT2P09913 472 aaKnown RBP20.65■□□□□ 0.9
PCDHA13-202ENST00000409494 FCHSD2O94868 740 aa20.65■□□□□ 0.9
PCDHA13-202ENST00000409494 MSH5O43196 834 aa20.64■□□□□ 0.9
PCDHA13-202ENST00000409494 LRPPRCP42704 1394 aaKnown RBP20.64■□□□□ 0.89
PCDHA13-202ENST00000409494 TNRQ92752 1358 aa20.64■□□□□ 0.89
PCDHA13-202ENST00000409494 TPRNQ4KMQ1 711 aa20.64■□□□□ 0.89
PCDHA13-202ENST00000409494 DIAPH3Q9NSV4 1193 aa20.64■□□□□ 0.89
PCDHA13-202ENST00000409494 RPRD2Q5VT52 1461 aaKnown RBP20.64■□□□□ 0.89
PCDHA13-202ENST00000409494 PRDM11Q9NQV5 511 aa20.63■□□□□ 0.89
PCDHA13-202ENST00000409494 ERC2O15083 957 aa20.63■□□□□ 0.89
PCDHA13-202ENST00000409494 KIF21AQ7Z4S6 1674 aa20.62■□□□□ 0.89
PCDHA13-202ENST00000409494 ABCC2Q92887 1545 aa20.62■□□□□ 0.89
PCDHA13-202ENST00000409494 CPLX2Q6PUV4 134 aaKnown RBP20.62■□□□□ 0.89
PCDHA13-202ENST00000409494 C14orf93Q9H972 538 aaKnown RBP20.62■□□□□ 0.89
PCDHA13-202ENST00000409494 TAOK2Q9UL54 1235 aa20.61■□□□□ 0.89
PCDHA13-202ENST00000409494 GZF1Q9H116 711 aaPredicted RBP20.6■□□□□ 0.89
PCDHA13-202ENST00000409494 SCAF11Q99590 1463 aaKnown RBP20.6■□□□□ 0.89
PCDHA13-202ENST00000409494 NSD2O96028 1365 aa20.6■□□□□ 0.89
PCDHA13-202ENST00000409494 SULT6B1Q6IMI4 303 aa20.6■□□□□ 0.89
PCDHA13-202ENST00000409494 TOM1L2Q6ZVM7 507 aa20.6■□□□□ 0.89
PCDHA13-202ENST00000409494 UBTFL1P0CB47 393 aaPredicted RBP20.59■□□□□ 0.89
PCDHA13-202ENST00000409494 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
PCDHA13-202ENST00000409494 AMOTL2Q9Y2J4 779 aa20.59■□□□□ 0.89
PCDHA13-202ENST00000409494 PDE3AQ14432 1141 aa20.58■□□□□ 0.89
PCDHA13-202ENST00000409494 RILPL2Q969X0 211 aa20.58■□□□□ 0.89
PCDHA13-202ENST00000409494 ANO8Q9HCE9 1232 aaPredicted RBP20.58■□□□□ 0.89
PCDHA13-202ENST00000409494 RNF20Q5VTR2 975 aa20.58■□□□□ 0.88
PCDHA13-202ENST00000409494 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.88
PCDHA13-202ENST00000409494 SHANK2Q9UPX8 1470 aa20.58■□□□□ 0.88
PCDHA13-202ENST00000409494 WASLO00401 505 aaPredicted RBP20.57■□□□□ 0.88
PCDHA13-202ENST00000409494 SYNE3Q6ZMZ3 975 aa20.57■□□□□ 0.88
PCDHA13-202ENST00000409494 TOMM22Q9NS69 142 aa20.57■□□□□ 0.88
PCDHA13-202ENST00000409494 UHRF1BP1LA0JNW5 1464 aa20.57■□□□□ 0.88
PCDHA13-202ENST00000409494 PLCB2Q00722 1185 aa20.57■□□□□ 0.88
PCDHA13-202ENST00000409494 ATP6V1DQ9Y5K8 247 aa20.57■□□□□ 0.88
PCDHA13-202ENST00000409494 VPS37DQ86XT2 251 aa20.56■□□□□ 0.88
PCDHA13-202ENST00000409494 KIF6Q6ZMV9 814 aa20.56■□□□□ 0.88
PCDHA13-202ENST00000409494 PHF8Q9UPP1 1060 aa20.56■□□□□ 0.88
PCDHA13-202ENST00000409494 TCOF1Q13428 1488 aaKnown RBP20.56■□□□□ 0.88
PCDHA13-202ENST00000409494 MSNP26038 577 aaKnown RBP20.56■□□□□ 0.88
PCDHA13-202ENST00000409494 NSD3Q9BZ95 1437 aa20.56■□□□□ 0.88
PCDHA13-202ENST00000409494 SLC4A3P48751 1232 aa20.55■□□□□ 0.88
PCDHA13-202ENST00000409494 GOLGA6L3A6NEY3 463 aa20.55■□□□□ 0.88
PCDHA13-202ENST00000409494 TWISTNBQ3B726 338 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms