RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 FAM135AQ9P2D6 1515 aa7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 NPC1L1Q9UHC9 1359 aa7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 SHANK2Q9UPX8 1470 aa7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 NUP160Q12769 1436 aa7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 APAF1O14727 1248 aa7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 ZSCAN20P17040 1043 aaPredicted RBP7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 TAF3Q5VWG9 929 aa7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 CFDP1Q9UEE9 299 aaPredicted RBP7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 CCDC39Q9UFE4 941 aa7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 DDX49Q9Y6V7 483 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 ASXL1Q8IXJ9 1541 aa7.27□□□□□ -1.25
R3HDM1-202ENST00000409478 SYNMO15061 1565 aa7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 XPCQ01831 940 aaPredicted RBP7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 BBXQ8WY36 941 aaPredicted RBP7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 WDR7Q9Y4E6 1490 aa7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 CDCA8Q53HL2 280 aa7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 AMER1Q5JTC6 1135 aaPredicted RBP7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 CCDC146Q8IYE0 955 aa7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 PRDM10Q9NQV6 1147 aa7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 SHROOM2Q13796 1616 aa7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 MAGI2Q86UL8 1455 aa7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.26□□□□□ -1.25
R3HDM1-202ENST00000409478 NBPF1Q3BBV0 1214 aa7.25□□□□□ -1.25
R3HDM1-202ENST00000409478 PPP4R3BQ5MIZ7 849 aa7.25□□□□□ -1.25
R3HDM1-202ENST00000409478 RARSP54136 660 aaKnown RBP7.25□□□□□ -1.25
R3HDM1-202ENST00000409478 HMGN5P82970 282 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 CCDC141Q6ZP82 1450 aa7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 K7ELQ4 463 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 MYRIPQ8NFW9 859 aa7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 PRIMPOLQ96LW4 560 aa7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 TROQ12816 1431 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 GPATCH8Q9UKJ3 1502 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 GRIN2AQ12879 1464 aa7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 HDAC1Q13547 482 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-202ENST00000409478 BAG4O95429 457 aaKnown RBP7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 MVPQ14764 893 aaKnown RBP7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 ZSCAN23Q3MJ62 389 aa7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 WWC1Q8IX03 1113 aa7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 ARID3AQ99856 593 aa7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 GTF2E1P29083 439 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 KIAA2012Q0VF49 1180 aa7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 C9orf84Q5VXU9 1444 aa7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 A2MP01023 1474 aa7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 NUP153P49790 1475 aaKnown RBP7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 ADCY10Q96PN6 1610 aa7.23□□□□□ -1.25
R3HDM1-202ENST00000409478 RNF17Q9BXT8 1623 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 GTF2F1P35269 517 aaKnown RBP eCLIP7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 NUCB2P80303 420 aa7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 STAC3Q96MF2 364 aa7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 KIF16BQ96L93 1317 aa7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 RLBP1P12271 317 aa7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 SSFA2P28290 1259 aa7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 RAPGEF6Q8TEU7 1601 aa7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 RBSNQ9H1K0 784 aa7.22□□□□□ -1.25
R3HDM1-202ENST00000409478 CAVIN1Q6NZI2 390 aaKnown RBP7.21□□□□□ -1.25
R3HDM1-202ENST00000409478 DMRT2Q9Y5R5 561 aa7.21□□□□□ -1.25
R3HDM1-202ENST00000409478 PDIA4P13667 645 aaKnown RBP7.21□□□□□ -1.25
R3HDM1-202ENST00000409478 WDR63Q8IWG1 891 aa7.21□□□□□ -1.25
R3HDM1-202ENST00000409478 FTSJ3Q8IY81 847 aaKnown RBP7.21□□□□□ -1.25
R3HDM1-202ENST00000409478 KANK1Q14678 1352 aa7.21□□□□□ -1.26
R3HDM1-202ENST00000409478 SYNJ2O15056 1496 aa7.21□□□□□ -1.26
R3HDM1-202ENST00000409478 ZKSCAN2Q63HK3 967 aa7.21□□□□□ -1.26
R3HDM1-202ENST00000409478 ZNF777Q9ULD5 760 aaPredicted RBP7.21□□□□□ -1.26
R3HDM1-202ENST00000409478 DNTTIP2Q5QJE6 756 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 IPO4Q8TEX9 1081 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 NAP1L2Q9ULW6 460 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 CT47B1P0C2W7 299 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 PRIM1P49642 420 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 MCTP1Q6DN14 999 aa7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 LRSAM1Q6UWE0 723 aa7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 DZIP1LQ8IYY4 767 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 TSPY4P0CV99 314 aa7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 TSPY10P0CW01 314 aa7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 CBX1P83916 185 aa7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 DDX19BQ9UMR2 479 aa7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 POLR3AO14802 1390 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-202ENST00000409478 LMBRD1Q9NUN5 540 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 MYO5CQ9NQX4 1742 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 PTMAP06454 111 aaKnown RBP7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 RGL3Q3MIN7 710 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 NCBP3Q53F19 620 aaKnown RBP7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 BMP2KLQ5H9B9 411 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 KIF2CQ99661 725 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 PRG4Q92954 1404 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 KIAA0556O60303 1618 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 CDC42BPAQ5VT25 1732 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 BCL11BQ9C0K0 894 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 KIF3AQ9Y496 699 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 PBRM1Q86U86 1689 aa7.19□□□□□ -1.26
R3HDM1-202ENST00000409478 CCDC27Q2M243 656 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 CFAP44Q96MT7 982 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 CWC22Q9HCG8 908 aaKnown RBP7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 FOXD4L1Q9NU39 408 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 ZNF710Q8N1W2 664 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 GAS2L2Q8NHY3 880 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 RUNDC1Q96C34 613 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 IQGAP1P46940 1657 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 IQSEC2Q5JU85 1478 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 NUCB1Q02818 461 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 PIBF1Q8WXW3 757 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms