RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 DISP3Q9P2K9 1392 aa20.03■□□□□ 0.8
LIMS2-205ENST00000409455 PREX1Q8TCU6 1659 aa20.03■□□□□ 0.8
LIMS2-205ENST00000409455 TMF1P82094 1093 aa20.02■□□□□ 0.79
LIMS2-205ENST00000409455 ESF1Q9H501 851 aaKnown RBP20.02■□□□□ 0.79
LIMS2-205ENST00000409455 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
LIMS2-205ENST00000409455 CLTCQ00610 1675 aaKnown RBP20.01■□□□□ 0.79
LIMS2-205ENST00000409455 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
LIMS2-205ENST00000409455 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.01■□□□□ 0.79
LIMS2-205ENST00000409455 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
LIMS2-205ENST00000409455 C14orf93Q9H972 538 aaKnown RBP20.01■□□□□ 0.79
LIMS2-205ENST00000409455 PIK3C2GO75747 1445 aa20■□□□□ 0.79
LIMS2-205ENST00000409455 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
LIMS2-205ENST00000409455 PPLO60437 1756 aa19.99■□□□□ 0.79
LIMS2-205ENST00000409455 IQGAP1P46940 1657 aa19.98■□□□□ 0.79
LIMS2-205ENST00000409455 ZMYM3Q14202 1370 aa19.98■□□□□ 0.79
LIMS2-205ENST00000409455 TMEM132EQ6IEE7 984 aa19.97■□□□□ 0.79
LIMS2-205ENST00000409455 STAG3Q9UJ98 1225 aa19.97■□□□□ 0.79
LIMS2-205ENST00000409455 RGS3P49796 1198 aa19.96■□□□□ 0.79
LIMS2-205ENST00000409455 NEXMIFQ5QGS0 1516 aa19.96■□□□□ 0.79
LIMS2-205ENST00000409455 EIF3AQ14152 1382 aaKnown RBP19.95■□□□□ 0.78
LIMS2-205ENST00000409455 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
LIMS2-205ENST00000409455 DUSP27Q5VZP5 1158 aa19.94■□□□□ 0.78
LIMS2-205ENST00000409455 PANK3Q9H999 370 aa19.94■□□□□ 0.78
LIMS2-205ENST00000409455 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
LIMS2-205ENST00000409455 ADAMTS8Q9UP79 889 aa19.93■□□□□ 0.78
LIMS2-205ENST00000409455 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
LIMS2-205ENST00000409455 SPATA31D1Q6ZQQ2 1576 aa19.92■□□□□ 0.78
LIMS2-205ENST00000409455 ZFYVE9O95405 1425 aa19.91■□□□□ 0.78
LIMS2-205ENST00000409455 WDR43Q15061 677 aaKnown RBP eCLIP19.91■□□□□ 0.78
LIMS2-205ENST00000409455 GOLGA2Q08379 1002 aa19.9■□□□□ 0.78
LIMS2-205ENST00000409455 MYO5BQ9ULV0 1848 aa19.9■□□□□ 0.78
LIMS2-205ENST00000409455 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
LIMS2-205ENST00000409455 SETBP1Q9Y6X0 1596 aa19.89■□□□□ 0.78
LIMS2-205ENST00000409455 ADGRB1O14514 1584 aa19.89■□□□□ 0.77
LIMS2-205ENST00000409455 CDCA8Q53HL2 280 aa19.89■□□□□ 0.77
LIMS2-205ENST00000409455 BECN1Q14457 450 aa19.86■□□□□ 0.77
LIMS2-205ENST00000409455 ZNF521Q96K83 1311 aa19.86■□□□□ 0.77
LIMS2-205ENST00000409455 CENPJQ9HC77 1338 aaPredicted RBP19.86■□□□□ 0.77
LIMS2-205ENST00000409455 A2ML1A8K2U0 1454 aa19.86■□□□□ 0.77
LIMS2-205ENST00000409455 SLC24A1O60721 1099 aa19.85■□□□□ 0.77
LIMS2-205ENST00000409455 VIRMAQ69YN4 1812 aaKnown RBP19.85■□□□□ 0.77
LIMS2-205ENST00000409455 L1TD1Q5T7N2 865 aaKnown RBP19.85■□□□□ 0.77
LIMS2-205ENST00000409455 CEBPAP49715 358 aaPredicted RBP19.84■□□□□ 0.77
LIMS2-205ENST00000409455 POGKQ9P215 609 aa19.84■□□□□ 0.77
LIMS2-205ENST00000409455 TNRQ92752 1358 aa19.82■□□□□ 0.76
LIMS2-205ENST00000409455 SLFN5Q08AF3 891 aa19.81■□□□□ 0.76
LIMS2-205ENST00000409455 STK26Q9P289 416 aa19.81■□□□□ 0.76
LIMS2-205ENST00000409455 SBNO2Q9Y2G9 1366 aa19.81■□□□□ 0.76
LIMS2-205ENST00000409455 PPP2R1AP30153 589 aa19.81■□□□□ 0.76
LIMS2-205ENST00000409455 USP19O94966 1318 aa19.81■□□□□ 0.76
LIMS2-205ENST00000409455 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
LIMS2-205ENST00000409455 MAPK8IP3Q9UPT6 1336 aa19.8■□□□□ 0.76
LIMS2-205ENST00000409455 RIMS2Q9UQ26 1411 aa19.8■□□□□ 0.76
LIMS2-205ENST00000409455 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
LIMS2-205ENST00000409455 NKTRP30414 1462 aaKnown RBP19.79■□□□□ 0.76
LIMS2-205ENST00000409455 MYO3AQ8NEV4 1616 aa19.78■□□□□ 0.76
LIMS2-205ENST00000409455 SLKQ9H2G2 1235 aaPredicted RBP19.78■□□□□ 0.76
LIMS2-205ENST00000409455 SAFB2Q14151 953 aaKnown RBP eCLIP19.76■□□□□ 0.75
LIMS2-205ENST00000409455 TRMT2AQ8IZ69 625 aaKnown RBP19.76■□□□□ 0.75
LIMS2-205ENST00000409455 RRAGDQ9NQL2 400 aaPredicted RBP19.76■□□□□ 0.75
LIMS2-205ENST00000409455 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
LIMS2-205ENST00000409455 CGNL1Q0VF96 1302 aa19.75■□□□□ 0.75
LIMS2-205ENST00000409455 IGHDP01880 384 aa19.74■□□□□ 0.75
LIMS2-205ENST00000409455 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.74■□□□□ 0.75
LIMS2-205ENST00000409455 ALKQ9UM73 1620 aa19.74■□□□□ 0.75
LIMS2-205ENST00000409455 BCAR3O75815 825 aa19.73■□□□□ 0.75
LIMS2-205ENST00000409455 UPF2Q9HAU5 1272 aaKnown RBP19.73■□□□□ 0.75
LIMS2-205ENST00000409455 KDM5AP29375 1690 aaKnown RBP19.73■□□□□ 0.75
LIMS2-205ENST00000409455 YTHDC2Q9H6S0 1430 aaKnown RBP19.73■□□□□ 0.75
LIMS2-205ENST00000409455 SEC24BO95487 1268 aa19.72■□□□□ 0.75
LIMS2-205ENST00000409455 HDGFP51858 240 aaKnown RBP19.72■□□□□ 0.75
LIMS2-205ENST00000409455 QRICH2Q9H0J4 1663 aa19.71■□□□□ 0.75
LIMS2-205ENST00000409455 E9PSI1 815 aa19.71■□□□□ 0.75
LIMS2-205ENST00000409455 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
LIMS2-205ENST00000409455 NINLQ9Y2I6 1382 aa19.71■□□□□ 0.75
LIMS2-205ENST00000409455 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
LIMS2-205ENST00000409455 GLIPR1L2Q4G1C9 344 aa19.71■□□□□ 0.75
LIMS2-205ENST00000409455 PRAM1Q96QH2 718 aa19.71■□□□□ 0.75
LIMS2-205ENST00000409455 CCDC146Q8IYE0 955 aa19.7■□□□□ 0.74
LIMS2-205ENST00000409455 CLUAP1Q96AJ1 413 aa19.7■□□□□ 0.74
LIMS2-205ENST00000409455 ANTXR1Q9H6X2 564 aa19.7■□□□□ 0.74
LIMS2-205ENST00000409455 NLRP1Q9C000 1473 aa19.7■□□□□ 0.74
LIMS2-205ENST00000409455 ARHGEF28Q8N1W1 1705 aaKnown RBP19.7■□□□□ 0.74
LIMS2-205ENST00000409455 TMEM2Q9UHN6 1383 aa19.7■□□□□ 0.74
LIMS2-205ENST00000409455 SLC12A5Q9H2X9 1139 aa19.69■□□□□ 0.74
LIMS2-205ENST00000409455 MYOM1P52179 1685 aa19.69■□□□□ 0.74
LIMS2-205ENST00000409455 EVC2Q86UK5 1308 aa19.69■□□□□ 0.74
LIMS2-205ENST00000409455 CANXP27824 592 aaKnown RBP19.69■□□□□ 0.74
LIMS2-205ENST00000409455 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
LIMS2-205ENST00000409455 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
LIMS2-205ENST00000409455 PTPRMP28827 1452 aa19.69■□□□□ 0.74
LIMS2-205ENST00000409455 GOLGA6L3A6NEY3 463 aa19.68■□□□□ 0.74
LIMS2-205ENST00000409455 APAF1O14727 1248 aa19.68■□□□□ 0.74
LIMS2-205ENST00000409455 C3P01024 1663 aa19.67■□□□□ 0.74
LIMS2-205ENST00000409455 CABP2Q9NPB3 220 aa19.66■□□□□ 0.74
LIMS2-205ENST00000409455 FER1L4A9Z1Z3 1794 aa19.66■□□□□ 0.74
LIMS2-205ENST00000409455 MINK1Q8N4C8 1332 aaPredicted RBP19.65■□□□□ 0.74
LIMS2-205ENST00000409455 UBR1Q8IWV7 1749 aa19.65■□□□□ 0.74
LIMS2-205ENST00000409455 LTKP29376 864 aa19.65■□□□□ 0.74
LIMS2-205ENST00000409455 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms