RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 TRAK1Q9UPV9 953 aa18.34■□□□□ 0.53
LIMS2-203ENST00000409254 ZNF335Q9H4Z2 1342 aaPredicted RBP18.3■□□□□ 0.52
LIMS2-203ENST00000409254 PUS7Q96PZ0 661 aaKnown RBP18.3■□□□□ 0.52
LIMS2-203ENST00000409254 PRAM1Q96QH2 718 aa18.3■□□□□ 0.52
LIMS2-203ENST00000409254 STK26Q9P289 416 aa18.3■□□□□ 0.52
LIMS2-203ENST00000409254 TOPAZ1Q8N9V7 1692 aa18.3■□□□□ 0.52
LIMS2-203ENST00000409254 TULP4Q9NRJ4 1543 aa18.29■□□□□ 0.52
LIMS2-203ENST00000409254 POGKQ9P215 609 aa18.29■□□□□ 0.52
LIMS2-203ENST00000409254 ST20-MTHFSA0A0A6YYL1 179 aa18.28■□□□□ 0.52
LIMS2-203ENST00000409254 HSPA5P11021 654 aaKnown RBP18.28■□□□□ 0.52
LIMS2-203ENST00000409254 TESK2Q96S53 571 aa18.28■□□□□ 0.52
LIMS2-203ENST00000409254 SENP3Q9H4L4 574 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-203ENST00000409254 TMEM94Q12767 1356 aa18.27■□□□□ 0.51
LIMS2-203ENST00000409254 ANKARQ7Z5J8 1434 aa18.26■□□□□ 0.51
LIMS2-203ENST00000409254 CDCA8Q53HL2 280 aa18.26■□□□□ 0.51
LIMS2-203ENST00000409254 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
LIMS2-203ENST00000409254 MYOM1P52179 1685 aa18.25■□□□□ 0.51
LIMS2-203ENST00000409254 EVC2Q86UK5 1308 aa18.24■□□□□ 0.51
LIMS2-203ENST00000409254 TMF1P82094 1093 aa18.24■□□□□ 0.51
LIMS2-203ENST00000409254 PROSER2Q86WR7 435 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-203ENST00000409254 MSH6P52701 1360 aa18.24■□□□□ 0.51
LIMS2-203ENST00000409254 NINLQ9Y2I6 1382 aa18.24■□□□□ 0.51
LIMS2-203ENST00000409254 KIF1AQ12756 1690 aa18.24■□□□□ 0.51
LIMS2-203ENST00000409254 RGPD8O14715 1765 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-203ENST00000409254 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
LIMS2-203ENST00000409254 ATAD2Q6PL18 1390 aa18.22■□□□□ 0.51
LIMS2-203ENST00000409254 WAPLQ7Z5K2 1190 aa18.22■□□□□ 0.51
LIMS2-203ENST00000409254 C19orf44Q9H6X5 657 aa18.22■□□□□ 0.51
LIMS2-203ENST00000409254 ATP7BP35670 1465 aa18.21■□□□□ 0.51
LIMS2-203ENST00000409254 AKAP12Q02952 1782 aa18.19■□□□□ 0.5
LIMS2-203ENST00000409254 WASLO00401 505 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-203ENST00000409254 DISP3Q9P2K9 1392 aa18.18■□□□□ 0.5
LIMS2-203ENST00000409254 CADPS2Q86UW7 1296 aa18.18■□□□□ 0.5
LIMS2-203ENST00000409254 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-203ENST00000409254 MON2Q7Z3U7 1717 aa18.16■□□□□ 0.5
LIMS2-203ENST00000409254 MST1RQ04912 1400 aa18.15■□□□□ 0.5
LIMS2-203ENST00000409254 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
LIMS2-203ENST00000409254 CCDC7Q96M83 1385 aa18.15■□□□□ 0.5
LIMS2-203ENST00000409254 C14orf37Q86TY3 774 aa18.14■□□□□ 0.49
LIMS2-203ENST00000409254 ATF3P18847 181 aa18.13■□□□□ 0.49
LIMS2-203ENST00000409254 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
LIMS2-203ENST00000409254 C1orf167Q5SNV9 1468 aa18.12■□□□□ 0.49
LIMS2-203ENST00000409254 ZNF316A6NFI3 1004 aaPredicted RBP18.11■□□□□ 0.49
LIMS2-203ENST00000409254 KIF7Q2M1P5 1343 aa18.11■□□□□ 0.49
LIMS2-203ENST00000409254 NHSL1Q5SYE7 1610 aa18.11■□□□□ 0.49
LIMS2-203ENST00000409254 NRKQ7Z2Y5 1582 aa18.1■□□□□ 0.49
LIMS2-203ENST00000409254 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
LIMS2-203ENST00000409254 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
LIMS2-203ENST00000409254 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
LIMS2-203ENST00000409254 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
LIMS2-203ENST00000409254 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
LIMS2-203ENST00000409254 PPIP5K1Q6PFW1 1433 aa18.08■□□□□ 0.49
LIMS2-203ENST00000409254 POLR3AO14802 1390 aaPredicted RBP18.08■□□□□ 0.49
LIMS2-203ENST00000409254 ROBO1Q9Y6N7 1651 aa18.07■□□□□ 0.48
LIMS2-203ENST00000409254 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
LIMS2-203ENST00000409254 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
LIMS2-203ENST00000409254 USP54Q70EL1 1684 aa18.06■□□□□ 0.48
LIMS2-203ENST00000409254 PRR36Q9H6K5 1346 aa18.06■□□□□ 0.48
LIMS2-203ENST00000409254 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
LIMS2-203ENST00000409254 CERKQ8TCT0 537 aa18.06■□□□□ 0.48
LIMS2-203ENST00000409254 NUDT16Q96DE0 195 aaKnown RBP18.06■□□□□ 0.48
LIMS2-203ENST00000409254 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
LIMS2-203ENST00000409254 AHDC1Q5TGY3 1603 aaPredicted RBP18.05■□□□□ 0.48
LIMS2-203ENST00000409254 KIF20BQ96Q89 1820 aa18.05■□□□□ 0.48
LIMS2-203ENST00000409254 ANKRD26Q9UPS8 1709 aa18.05■□□□□ 0.48
LIMS2-203ENST00000409254 TRPM3Q9HCF6 1732 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-203ENST00000409254 CD163L1Q9NR16 1453 aa18.04■□□□□ 0.48
LIMS2-203ENST00000409254 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-203ENST00000409254 RBM33Q96EV2 1170 aaKnown RBP18.04■□□□□ 0.48
LIMS2-203ENST00000409254 CABP2Q9NPB3 220 aa18.04■□□□□ 0.48
LIMS2-203ENST00000409254 TOM1O60784 492 aa18.03■□□□□ 0.48
LIMS2-203ENST00000409254 TERF2IPQ9NYB0 399 aa18.02■□□□□ 0.48
LIMS2-203ENST00000409254 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
LIMS2-203ENST00000409254 EDC4Q6P2E9 1401 aaKnown RBP18.01■□□□□ 0.47
LIMS2-203ENST00000409254 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
LIMS2-203ENST00000409254 ALS2Q96Q42 1657 aa18■□□□□ 0.47
LIMS2-203ENST00000409254 USP6P35125 1406 aa17.99■□□□□ 0.47
LIMS2-203ENST00000409254 PHF8Q9UPP1 1060 aa17.99■□□□□ 0.47
LIMS2-203ENST00000409254 A0A1W2PP64 1363 aa17.99■□□□□ 0.47
LIMS2-203ENST00000409254 NPHP3Q7Z494 1330 aa17.98■□□□□ 0.47
LIMS2-203ENST00000409254 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-203ENST00000409254 PXDNQ92626 1479 aa17.97■□□□□ 0.47
LIMS2-203ENST00000409254 NPC1L1Q9UHC9 1359 aa17.97■□□□□ 0.47
LIMS2-203ENST00000409254 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
LIMS2-203ENST00000409254 PHLPP1O60346 1717 aa17.97■□□□□ 0.47
LIMS2-203ENST00000409254 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
LIMS2-203ENST00000409254 NSD2O96028 1365 aa17.96■□□□□ 0.47
LIMS2-203ENST00000409254 BRINP3Q76B58 766 aa17.96■□□□□ 0.47
LIMS2-203ENST00000409254 ESCO1Q5FWF5 840 aa17.95■□□□□ 0.46
LIMS2-203ENST00000409254 PIK3C2AO00443 1686 aa17.95■□□□□ 0.46
LIMS2-203ENST00000409254 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
LIMS2-203ENST00000409254 ACEP12821 1306 aa17.95■□□□□ 0.46
LIMS2-203ENST00000409254 COL16A1Q07092 1604 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-203ENST00000409254 SBNO1A3KN83 1393 aa17.94■□□□□ 0.46
LIMS2-203ENST00000409254 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
LIMS2-203ENST00000409254 TMC1Q8TDI8 760 aa17.94■□□□□ 0.46
LIMS2-203ENST00000409254 SLC12A5Q9H2X9 1139 aa17.94■□□□□ 0.46
LIMS2-203ENST00000409254 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
LIMS2-203ENST00000409254 MARF1Q9Y4F3 1742 aaKnown RBP17.93■□□□□ 0.46
LIMS2-203ENST00000409254 CRYBG1Q9Y4K1 1723 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms