RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
KDM3A-202ENST00000409064 PHF8Q9UPP1 1060 aa12.6□□□□□ -0.39
KDM3A-202ENST00000409064 NCOA1Q15788 1441 aa12.6□□□□□ -0.39
KDM3A-202ENST00000409064 C11orf95C9JLR9 678 aaPredicted RBP12.6□□□□□ -0.39
KDM3A-202ENST00000409064 DAPK1P53355 1430 aa12.6□□□□□ -0.39
KDM3A-202ENST00000409064 CLSTN1O94985 981 aa12.59□□□□□ -0.39
KDM3A-202ENST00000409064 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
KDM3A-202ENST00000409064 SULT6B1Q6IMI4 303 aa12.58□□□□□ -0.39
KDM3A-202ENST00000409064 KIAA1107Q9UPP5 1409 aa12.58□□□□□ -0.4
KDM3A-202ENST00000409064 CABP4P57796 275 aa12.58□□□□□ -0.4
KDM3A-202ENST00000409064 GNL2Q13823 731 aaKnown RBP12.58□□□□□ -0.4
KDM3A-202ENST00000409064 GAS2L2Q8NHY3 880 aa12.58□□□□□ -0.4
KDM3A-202ENST00000409064 EXOC6Q8TAG9 804 aa12.57□□□□□ -0.4
KDM3A-202ENST00000409064 CTTNBP2Q8WZ74 1663 aa12.57□□□□□ -0.4
KDM3A-202ENST00000409064 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
KDM3A-202ENST00000409064 RRS1Q15050 365 aaKnown RBP12.57□□□□□ -0.4
KDM3A-202ENST00000409064 NOL10Q9BSC4 688 aaKnown RBP12.57□□□□□ -0.4
KDM3A-202ENST00000409064 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
KDM3A-202ENST00000409064 TNRQ92752 1358 aa12.56□□□□□ -0.4
KDM3A-202ENST00000409064 RAD21O60216 631 aa12.56□□□□□ -0.4
KDM3A-202ENST00000409064 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
KDM3A-202ENST00000409064 PDE4AP27815 886 aa12.56□□□□□ -0.4
KDM3A-202ENST00000409064 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
KDM3A-202ENST00000409064 ROCK1Q13464 1354 aa12.56□□□□□ -0.4
KDM3A-202ENST00000409064 GNAI1P63096 354 aa12.55□□□□□ -0.4
KDM3A-202ENST00000409064 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
KDM3A-202ENST00000409064 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
KDM3A-202ENST00000409064 KCNH5Q8NCM2 988 aa12.55□□□□□ -0.4
KDM3A-202ENST00000409064 E9PSI1 815 aa12.54□□□□□ -0.4
KDM3A-202ENST00000409064 BRD4O60885 1362 aaPredicted RBP12.54□□□□□ -0.4
KDM3A-202ENST00000409064 UGGT2Q9NYU1 1516 aa12.54□□□□□ -0.4
KDM3A-202ENST00000409064 GOLGA6L4A6NEF3 574 aa12.54□□□□□ -0.4
KDM3A-202ENST00000409064 DHX29Q7Z478 1369 aaKnown RBP12.54□□□□□ -0.4
KDM3A-202ENST00000409064 KRT28Q7Z3Y7 464 aa12.54□□□□□ -0.4
KDM3A-202ENST00000409064 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
KDM3A-202ENST00000409064 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
KDM3A-202ENST00000409064 PLIN1O60240 522 aa12.53□□□□□ -0.4
KDM3A-202ENST00000409064 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
KDM3A-202ENST00000409064 MSH6P52701 1360 aa12.53□□□□□ -0.4
KDM3A-202ENST00000409064 ZKSCAN2Q63HK3 967 aa12.53□□□□□ -0.4
KDM3A-202ENST00000409064 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
KDM3A-202ENST00000409064 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
KDM3A-202ENST00000409064 KIF14Q15058 1648 aa12.51□□□□□ -0.41
KDM3A-202ENST00000409064 ATAD2Q6PL18 1390 aa12.51□□□□□ -0.41
KDM3A-202ENST00000409064 ATP10BO94823 1461 aa12.51□□□□□ -0.41
KDM3A-202ENST00000409064 NCKAP5LQ9HCH0 1330 aa12.51□□□□□ -0.41
KDM3A-202ENST00000409064 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
KDM3A-202ENST00000409064 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
KDM3A-202ENST00000409064 CAMSAP2Q08AD1 1489 aa12.5□□□□□ -0.41
KDM3A-202ENST00000409064 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
KDM3A-202ENST00000409064 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
KDM3A-202ENST00000409064 G3BP1Q13283 466 aaKnown RBP eCLIP12.5□□□□□ -0.41
KDM3A-202ENST00000409064 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
KDM3A-202ENST00000409064 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
KDM3A-202ENST00000409064 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
KDM3A-202ENST00000409064 BICDL1Q6ZP65 573 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 VPS53Q5VIR6 699 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 AMOTL1Q8IY63 956 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 TCP11L2Q8N4U5 519 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 RILPL2Q969X0 211 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 WDR7Q9Y4E6 1490 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 APPP05067 770 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 NEUROD6Q96NK8 337 aa12.49□□□□□ -0.41
KDM3A-202ENST00000409064 CTDP1Q9Y5B0 961 aaPredicted RBP12.49□□□□□ -0.41
KDM3A-202ENST00000409064 TCOF1Q13428 1488 aaKnown RBP12.48□□□□□ -0.41
KDM3A-202ENST00000409064 EXOC5O00471 708 aa12.48□□□□□ -0.41
KDM3A-202ENST00000409064 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
KDM3A-202ENST00000409064 HSP90B1P14625 803 aaKnown RBP12.48□□□□□ -0.41
KDM3A-202ENST00000409064 ABCC5O15440 1437 aa12.48□□□□□ -0.41
KDM3A-202ENST00000409064 COG6Q9Y2V7 657 aa12.48□□□□□ -0.41
KDM3A-202ENST00000409064 PLCH2O75038 1416 aa12.48□□□□□ -0.41
KDM3A-202ENST00000409064 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
KDM3A-202ENST00000409064 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
KDM3A-202ENST00000409064 LRPPRCP42704 1394 aaKnown RBP12.47□□□□□ -0.41
KDM3A-202ENST00000409064 FAM135AQ9P2D6 1515 aa12.47□□□□□ -0.41
KDM3A-202ENST00000409064 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
KDM3A-202ENST00000409064 PLCB2Q00722 1185 aa12.47□□□□□ -0.41
KDM3A-202ENST00000409064 ANKRD45Q5TZF3 282 aa12.47□□□□□ -0.41
KDM3A-202ENST00000409064 MPRIPQ6WCQ1 1025 aa12.47□□□□□ -0.41
KDM3A-202ENST00000409064 HSCBQ8IWL3 235 aa12.47□□□□□ -0.41
KDM3A-202ENST00000409064 CWC22Q9HCG8 908 aaKnown RBP12.47□□□□□ -0.41
KDM3A-202ENST00000409064 HDGFL1Q5TGJ6 251 aa12.46□□□□□ -0.41
KDM3A-202ENST00000409064 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
KDM3A-202ENST00000409064 CRBNQ96SW2 442 aa12.46□□□□□ -0.41
KDM3A-202ENST00000409064 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.41
KDM3A-202ENST00000409064 LRRFIP1Q32MZ4 808 aaKnown RBP12.46□□□□□ -0.42
KDM3A-202ENST00000409064 NME9Q86XW9 330 aa12.46□□□□□ -0.42
KDM3A-202ENST00000409064 MYL6BP14649 208 aa12.45□□□□□ -0.42
KDM3A-202ENST00000409064 ADAMTS8Q9UP79 889 aa12.45□□□□□ -0.42
KDM3A-202ENST00000409064 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
KDM3A-202ENST00000409064 UHRF1BP1LA0JNW5 1464 aa12.45□□□□□ -0.42
KDM3A-202ENST00000409064 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
KDM3A-202ENST00000409064 MARCH6O60337 910 aa12.44□□□□□ -0.42
KDM3A-202ENST00000409064 HMGB2P26583 209 aaKnown RBP12.44□□□□□ -0.42
KDM3A-202ENST00000409064 TMOD3Q9NYL9 352 aa12.44□□□□□ -0.42
KDM3A-202ENST00000409064 PPP2R1AP30153 589 aa12.44□□□□□ -0.42
KDM3A-202ENST00000409064 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
KDM3A-202ENST00000409064 NPHP3Q7Z494 1330 aa12.44□□□□□ -0.42
KDM3A-202ENST00000409064 NOL8Q76FK4 1167 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms