RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 PMFBP1Q8TBY8 1022 aa16.18■□□□□ 0.18
ATG9A-203ENST00000409033 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
ATG9A-203ENST00000409033 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
ATG9A-203ENST00000409033 RRS1Q15050 365 aaKnown RBP16.17■□□□□ 0.18
ATG9A-203ENST00000409033 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
ATG9A-203ENST00000409033 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
ATG9A-203ENST00000409033 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
ATG9A-203ENST00000409033 CEP152O94986 1710 aa16.16■□□□□ 0.18
ATG9A-203ENST00000409033 LTV1Q96GA3 475 aaPredicted RBP16.16■□□□□ 0.18
ATG9A-203ENST00000409033 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
ATG9A-203ENST00000409033 EID1Q9Y6B2 187 aa16.16■□□□□ 0.18
ATG9A-203ENST00000409033 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
ATG9A-203ENST00000409033 RIPK4P57078 832 aa16.16■□□□□ 0.18
ATG9A-203ENST00000409033 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
ATG9A-203ENST00000409033 NGDNQ8NEJ9 315 aaKnown RBP16.15■□□□□ 0.18
ATG9A-203ENST00000409033 TET3O43151 1660 aa16.15■□□□□ 0.18
ATG9A-203ENST00000409033 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
ATG9A-203ENST00000409033 THUMPD2Q9BTF0 503 aaKnown RBP16.15■□□□□ 0.18
ATG9A-203ENST00000409033 NME9Q86XW9 330 aa16.14■□□□□ 0.17
ATG9A-203ENST00000409033 SLFN5Q08AF3 891 aa16.14■□□□□ 0.17
ATG9A-203ENST00000409033 EFCAB6Q5THR3 1501 aa16.13■□□□□ 0.17
ATG9A-203ENST00000409033 KIDINS220Q9ULH0 1771 aa16.13■□□□□ 0.17
ATG9A-203ENST00000409033 ERVK-7P63135 1459 aa16.13■□□□□ 0.17
ATG9A-203ENST00000409033 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
ATG9A-203ENST00000409033 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
ATG9A-203ENST00000409033 MLH3Q9UHC1 1453 aa16.12■□□□□ 0.17
ATG9A-203ENST00000409033 COG3Q96JB2 828 aa16.12■□□□□ 0.17
ATG9A-203ENST00000409033 INO80Q9ULG1 1556 aaPredicted RBP16.12■□□□□ 0.17
ATG9A-203ENST00000409033 EMILIN1Q9Y6C2 1016 aa16.12■□□□□ 0.17
ATG9A-203ENST00000409033 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
ATG9A-203ENST00000409033 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
ATG9A-203ENST00000409033 ARAP3Q8WWN8 1544 aa16.11■□□□□ 0.17
ATG9A-203ENST00000409033 MADDQ8WXG6 1647 aa16.11■□□□□ 0.17
ATG9A-203ENST00000409033 PDE4AP27815 886 aa16.11■□□□□ 0.17
ATG9A-203ENST00000409033 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
ATG9A-203ENST00000409033 MSH5O43196 834 aa16.1■□□□□ 0.17
ATG9A-203ENST00000409033 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
ATG9A-203ENST00000409033 PPRC1Q5VV67 1664 aaKnown RBP16.1■□□□□ 0.17
ATG9A-203ENST00000409033 NEO1Q92859 1461 aa16.1■□□□□ 0.17
ATG9A-203ENST00000409033 KIF1BO60333 1816 aa16.1■□□□□ 0.17
ATG9A-203ENST00000409033 FYB1O15117 783 aa16.09■□□□□ 0.17
ATG9A-203ENST00000409033 TNNQ9UQP3 1299 aa16.09■□□□□ 0.17
ATG9A-203ENST00000409033 RNF17Q9BXT8 1623 aaKnown RBP16.09■□□□□ 0.17
ATG9A-203ENST00000409033 ABCC3O15438 1527 aa16.09■□□□□ 0.17
ATG9A-203ENST00000409033 A0A1W2PP64 1363 aa16.09■□□□□ 0.17
ATG9A-203ENST00000409033 EXOSC9Q06265 439 aaKnown RBP16.09■□□□□ 0.17
ATG9A-203ENST00000409033 NUDT16Q96DE0 195 aaKnown RBP16.08■□□□□ 0.17
ATG9A-203ENST00000409033 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
ATG9A-203ENST00000409033 APBB1O00213 710 aa16.06■□□□□ 0.16
ATG9A-203ENST00000409033 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
ATG9A-203ENST00000409033 ATAD2Q6PL18 1390 aa16.05■□□□□ 0.16
ATG9A-203ENST00000409033 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
ATG9A-203ENST00000409033 POLR1AO95602 1720 aaPredicted RBP16.04■□□□□ 0.16
ATG9A-203ENST00000409033 PIK3C2GO75747 1445 aa16.04■□□□□ 0.16
ATG9A-203ENST00000409033 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
ATG9A-203ENST00000409033 MAP3K4Q9Y6R4 1608 aa16.04■□□□□ 0.16
ATG9A-203ENST00000409033 ZMYM3Q14202 1370 aa16.04■□□□□ 0.16
ATG9A-203ENST00000409033 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
ATG9A-203ENST00000409033 AMPHP49418 695 aa16.03■□□□□ 0.16
ATG9A-203ENST00000409033 ANKRD36BQ8N2N9 1353 aa16.03■□□□□ 0.16
ATG9A-203ENST00000409033 WASLO00401 505 aaPredicted RBP16.03■□□□□ 0.16
ATG9A-203ENST00000409033 TMPOP42166 694 aaKnown RBP16.02■□□□□ 0.16
ATG9A-203ENST00000409033 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.16
ATG9A-203ENST00000409033 CCDC61Q9Y6R9 512 aa16.02■□□□□ 0.15
ATG9A-203ENST00000409033 MYOM2P54296 1465 aa16.01■□□□□ 0.15
ATG9A-203ENST00000409033 MYT1Q01538 1121 aa16.01■□□□□ 0.15
ATG9A-203ENST00000409033 CENPQQ7L2Z9 268 aaPredicted RBP16.01■□□□□ 0.15
ATG9A-203ENST00000409033 NECTIN2Q92692 538 aa16.01■□□□□ 0.15
ATG9A-203ENST00000409033 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
ATG9A-203ENST00000409033 XPCQ01831 940 aaPredicted RBP16■□□□□ 0.15
ATG9A-203ENST00000409033 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
ATG9A-203ENST00000409033 ZKSCAN2Q63HK3 967 aa15.99■□□□□ 0.15
ATG9A-203ENST00000409033 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
ATG9A-203ENST00000409033 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
ATG9A-203ENST00000409033 TNRQ92752 1358 aa15.99■□□□□ 0.15
ATG9A-203ENST00000409033 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
ATG9A-203ENST00000409033 AMOTL2Q9Y2J4 779 aa15.98■□□□□ 0.15
ATG9A-203ENST00000409033 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
ATG9A-203ENST00000409033 MROH2AA6NES4 1674 aa15.98■□□□□ 0.15
ATG9A-203ENST00000409033 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
ATG9A-203ENST00000409033 MROH1Q8NDA8 1641 aa15.98■□□□□ 0.15
ATG9A-203ENST00000409033 FAM83GA6ND36 823 aa15.98■□□□□ 0.15
ATG9A-203ENST00000409033 NLRP6P59044 892 aa15.98■□□□□ 0.15
ATG9A-203ENST00000409033 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
ATG9A-203ENST00000409033 DIP2CQ9Y2E4 1556 aa15.97■□□□□ 0.15
ATG9A-203ENST00000409033 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
ATG9A-203ENST00000409033 RARSP54136 660 aaKnown RBP15.97■□□□□ 0.15
ATG9A-203ENST00000409033 C1orf115Q9H7X2 142 aa15.97■□□□□ 0.15
ATG9A-203ENST00000409033 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
ATG9A-203ENST00000409033 DZIP1LQ8IYY4 767 aaKnown RBP15.97■□□□□ 0.15
ATG9A-203ENST00000409033 LTKP29376 864 aa15.96■□□□□ 0.15
ATG9A-203ENST00000409033 UPF2Q9HAU5 1272 aaKnown RBP15.96■□□□□ 0.15
ATG9A-203ENST00000409033 ARXQ96QS3 562 aa15.96■□□□□ 0.15
ATG9A-203ENST00000409033 METP08581 1390 aa15.96■□□□□ 0.14
ATG9A-203ENST00000409033 SYNMO15061 1565 aa15.95■□□□□ 0.14
ATG9A-203ENST00000409033 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
ATG9A-203ENST00000409033 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
ATG9A-203ENST00000409033 POLKQ9UBT6 870 aa15.95■□□□□ 0.14
ATG9A-203ENST00000409033 RIMBP3CA6NJZ7 1639 aa15.95■□□□□ 0.14
ATG9A-203ENST00000409033 RIMBP3BA6NNM3 1639 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms