RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 NTN5Q8WTR8 489 aaPredicted RBP1.61□□□□□ -2.15
MIR548F3-201ENST00000408509 TLL1O43897 1013 aa1.6□□□□□ -2.15
MIR548F3-201ENST00000408509 CD2BP2O95400 341 aaKnown RBP1.6□□□□□ -2.15
MIR548F3-201ENST00000408509 PTCD2Q8WV60 388 aaKnown RBP1.6□□□□□ -2.15
MIR548F3-201ENST00000408509 CAPN5O15484 640 aaPredicted RBP1.59□□□□□ -2.15
MIR548F3-201ENST00000408509 GATA4P43694 442 aa1.59□□□□□ -2.15
MIR548F3-201ENST00000408509 EFCAB3Q8N7B9 438 aa1.59□□□□□ -2.15
MIR548F3-201ENST00000408509 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
MIR548F3-201ENST00000408509 DBX1A6NMT0 343 aa1.58□□□□□ -2.16
MIR548F3-201ENST00000408509 PPP1R3GB7ZBB8 358 aa1.58□□□□□ -2.16
MIR548F3-201ENST00000408509 PDAP1Q13442 181 aaKnown RBP1.58□□□□□ -2.16
MIR548F3-201ENST00000408509 RIC3Q7Z5B4 369 aa1.58□□□□□ -2.16
MIR548F3-201ENST00000408509 KRTAP4-3Q9BYR4 195 aa1.58□□□□□ -2.16
MIR548F3-201ENST00000408509 ADAM33Q9BZ11 813 aa1.58□□□□□ -2.16
MIR548F3-201ENST00000408509 MAN1A2O60476 641 aa1.57□□□□□ -2.16
MIR548F3-201ENST00000408509 RNF40O75150 1001 aa1.57□□□□□ -2.16
MIR548F3-201ENST00000408509 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
MIR548F3-201ENST00000408509 SNRPNP63162 240 aaKnown RBP1.57□□□□□ -2.16
MIR548F3-201ENST00000408509 POU5F2Q8N7G0 328 aa1.57□□□□□ -2.16
MIR548F3-201ENST00000408509 PCMTD2Q9NV79 361 aa1.57□□□□□ -2.16
MIR548F3-201ENST00000408509 FOSBP53539 338 aa1.56□□□□□ -2.16
MIR548F3-201ENST00000408509 ZNF124Q15973 351 aa1.56□□□□□ -2.16
MIR548F3-201ENST00000408509 SAMD7Q7Z3H4 446 aa1.56□□□□□ -2.16
MIR548F3-201ENST00000408509 SH3RF1Q7Z6J0 888 aa1.56□□□□□ -2.16
MIR548F3-201ENST00000408509 OAS3Q9Y6K5 1087 aaKnown RBP1.56□□□□□ -2.16
MIR548F3-201ENST00000408509 TBC1D12O60347 775 aa1.55□□□□□ -2.16
MIR548F3-201ENST00000408509 ONECUT2O95948 504 aa1.55□□□□□ -2.16
MIR548F3-201ENST00000408509 RPIAP49247 311 aa1.55□□□□□ -2.16
MIR548F3-201ENST00000408509 PURBQ96QR8 312 aaKnown RBP1.55□□□□□ -2.16
MIR548F3-201ENST00000408509 TPSG1Q9NRR2 321 aa1.55□□□□□ -2.16
MIR548F3-201ENST00000408509 OBSCNQ5VST9 7968 aa1.54□□□□□ -2.16
MIR548F3-201ENST00000408509 SPDYE4A6NLX3 237 aa1.54□□□□□ -2.16
MIR548F3-201ENST00000408509 MS4A4AQ96JQ5 239 aa1.54□□□□□ -2.16
MIR548F3-201ENST00000408509 GGNQ86UU5 652 aa1.53□□□□□ -2.16
MIR548F3-201ENST00000408509 MRGPRX2Q96LB1 330 aa1.53□□□□□ -2.16
MIR548F3-201ENST00000408509 MKL2Q9ULH7 1088 aa1.53□□□□□ -2.16
MIR548F3-201ENST00000408509 SRSF11Q05519 484 aaKnown RBP1.52□□□□□ -2.17
MIR548F3-201ENST00000408509 SCARF1Q14162 830 aa1.52□□□□□ -2.17
MIR548F3-201ENST00000408509 ZDHHC16Q969W1 377 aa1.52□□□□□ -2.17
MIR548F3-201ENST00000408509 SUV39H2Q9H5I1 410 aa1.52□□□□□ -2.17
MIR548F3-201ENST00000408509 CDC14CA4D256 554 aa1.51□□□□□ -2.17
MIR548F3-201ENST00000408509 WNT7AO00755 349 aa1.51□□□□□ -2.17
MIR548F3-201ENST00000408509 BCRP11274 1271 aa1.51□□□□□ -2.17
MIR548F3-201ENST00000408509 HNRNPA0Q13151 305 aaKnown RBP1.51□□□□□ -2.17
MIR548F3-201ENST00000408509 ZDHHC13Q8IUH4 622 aa1.51□□□□□ -2.17
MIR548F3-201ENST00000408509 VWA5B2Q8N398 1253 aa1.51□□□□□ -2.17
MIR548F3-201ENST00000408509 TMC2Q8TDI7 906 aa1.51□□□□□ -2.17
MIR548F3-201ENST00000408509 TGM1P22735 817 aa1.5□□□□□ -2.17
MIR548F3-201ENST00000408509 PLCD3Q8N3E9 789 aa1.5□□□□□ -2.17
MIR548F3-201ENST00000408509 NANOS1Q8WY41 292 aaKnown RBP1.5□□□□□ -2.17
MIR548F3-201ENST00000408509 MRPL14Q6P1L8 145 aaKnown RBP1.49□□□□□ -2.17
MIR548F3-201ENST00000408509 BLOC1S3Q6QNY0 202 aa1.49□□□□□ -2.17
MIR548F3-201ENST00000408509 CRELD1Q96HD1 420 aa1.49□□□□□ -2.17
MIR548F3-201ENST00000408509 GP2P55259 537 aaKnown RBP1.48□□□□□ -2.17
MIR548F3-201ENST00000408509 ZNF648Q5T619 568 aaPredicted RBP1.48□□□□□ -2.17
MIR548F3-201ENST00000408509 SLC6A16Q9GZN6 736 aa1.48□□□□□ -2.17
MIR548F3-201ENST00000408509 RRAGCQ9HB90 399 aa1.48□□□□□ -2.17
MIR548F3-201ENST00000408509 ZBTB47Q9UFB7 747 aaPredicted RBP1.48□□□□□ -2.17
MIR548F3-201ENST00000408509 ONECUT3O60422 494 aaPredicted RBP1.47□□□□□ -2.17
MIR548F3-201ENST00000408509 ALDH1A1P00352 501 aa1.47□□□□□ -2.17
MIR548F3-201ENST00000408509 SV2AQ7L0J3 742 aa1.47□□□□□ -2.17
MIR548F3-201ENST00000408509 PCDHB3Q9Y5E6 796 aa1.47□□□□□ -2.17
MIR548F3-201ENST00000408509 SERINC4A6NH21 518 aa1.46□□□□□ -2.18
MIR548F3-201ENST00000408509 FCHSD2O94868 740 aa1.46□□□□□ -2.18
MIR548F3-201ENST00000408509 SSTR4P31391 388 aa1.46□□□□□ -2.18
MIR548F3-201ENST00000408509 MICALL1Q8N3F8 863 aa1.46□□□□□ -2.18
MIR548F3-201ENST00000408509 TRIM6-TRIM34B2RNG4 842 aa1.45□□□□□ -2.18
MIR548F3-201ENST00000408509 KRTAP10-6P60371 365 aaPredicted RBP1.45□□□□□ -2.18
MIR548F3-201ENST00000408509 KRTAP19-4Q3LI73 84 aa1.45□□□□□ -2.18
MIR548F3-201ENST00000408509 JPH4Q96JJ6 628 aa1.45□□□□□ -2.18
MIR548F3-201ENST00000408509 ADH1BP00325 375 aa1.44□□□□□ -2.18
MIR548F3-201ENST00000408509 RNF112Q9ULX5 631 aa1.44□□□□□ -2.18
MIR548F3-201ENST00000408509 PHF8Q9UPP1 1060 aa1.44□□□□□ -2.18
MIR548F3-201ENST00000408509 TTLL10Q6ZVT0 673 aa1.43□□□□□ -2.18
MIR548F3-201ENST00000408509 TRIM52Q96A61 297 aa1.43□□□□□ -2.18
MIR548F3-201ENST00000408509 AMHP03971 560 aa1.42□□□□□ -2.18
MIR548F3-201ENST00000408509 ATXN1P54253 815 aaKnown RBP1.42□□□□□ -2.18
MIR548F3-201ENST00000408509 CTSWP56202 376 aa1.42□□□□□ -2.18
MIR548F3-201ENST00000408509 ACDQ96AP0 544 aa1.42□□□□□ -2.18
MIR548F3-201ENST00000408509 SMAPO00193 183 aa1.41□□□□□ -2.18
MIR548F3-201ENST00000408509 ZBTB24O43167 697 aaPredicted RBP1.41□□□□□ -2.18
MIR548F3-201ENST00000408509 PTSQ03393 145 aa1.41□□□□□ -2.18
MIR548F3-201ENST00000408509 C6orf118Q5T5N4 469 aa1.41□□□□□ -2.18
MIR548F3-201ENST00000408509 FCF1Q9Y324 198 aaKnown RBP1.41□□□□□ -2.18
MIR548F3-201ENST00000408509 IGF1RP08069 1367 aa1.4□□□□□ -2.19
MIR548F3-201ENST00000408509 SOX12O15370 315 aa1.4□□□□□ -2.19
MIR548F3-201ENST00000408509 GAS6Q14393 721 aa1.4□□□□□ -2.19
MIR548F3-201ENST00000408509 PKN1Q16512 942 aa1.4□□□□□ -2.19
MIR548F3-201ENST00000408509 CCDC155Q8N6L0 562 aa1.4□□□□□ -2.19
MIR548F3-201ENST00000408509 LMCD1Q9NZU5 365 aa1.4□□□□□ -2.19
MIR548F3-201ENST00000408509 MENTQ9BUN1 341 aa1.39□□□□□ -2.19
MIR548F3-201ENST00000408509 REPIN1Q9BWE0 567 aaKnown RBP1.39□□□□□ -2.19
MIR548F3-201ENST00000408509 DNMT3LQ9UJW3 386 aa1.39□□□□□ -2.19
MIR548F3-201ENST00000408509 WASF2Q9Y6W5 498 aa1.39□□□□□ -2.19
MIR548F3-201ENST00000408509 KCNA4P22459 653 aa1.38□□□□□ -2.19
MIR548F3-201ENST00000408509 KRTAP10-2P60368 255 aa1.38□□□□□ -2.19
MIR548F3-201ENST00000408509 PLPP6Q8IY26 295 aa1.38□□□□□ -2.19
MIR548F3-201ENST00000408509 UPF1Q92900 1129 aaKnown RBP eCLIP1.38□□□□□ -2.19
MIR548F3-201ENST00000408509 PRR14Q9BWN1 585 aa1.38□□□□□ -2.19
MIR548F3-201ENST00000408509 KRTAP29-1A8MX34 341 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms