RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
APOBEC3B-204ENST00000407298 CCDC125Q86Z20 511 aa18.52■□□□□ 0.56
APOBEC3B-204ENST00000407298 ZRANB1Q9UGI0 708 aa18.51■□□□□ 0.55
APOBEC3B-204ENST00000407298 LRPPRCP42704 1394 aaKnown RBP18.51■□□□□ 0.55
APOBEC3B-204ENST00000407298 ATRNO75882 1429 aa18.5■□□□□ 0.55
APOBEC3B-204ENST00000407298 NAIPQ13075 1403 aa18.49■□□□□ 0.55
APOBEC3B-204ENST00000407298 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
APOBEC3B-204ENST00000407298 COL22A1Q8NFW1 1626 aaPredicted RBP18.47■□□□□ 0.55
APOBEC3B-204ENST00000407298 FOXO3O43524 673 aa18.46■□□□□ 0.55
APOBEC3B-204ENST00000407298 MYOM2P54296 1465 aa18.46■□□□□ 0.54
APOBEC3B-204ENST00000407298 GJD4Q96KN9 370 aaPredicted RBP18.45■□□□□ 0.54
APOBEC3B-204ENST00000407298 RRBP1Q9P2E9 1410 aaKnown RBP18.45■□□□□ 0.54
APOBEC3B-204ENST00000407298 CDC42BPGQ6DT37 1551 aa18.43■□□□□ 0.54
APOBEC3B-204ENST00000407298 BCL9LQ86UU0 1499 aa18.42■□□□□ 0.54
APOBEC3B-204ENST00000407298 PXDNQ92626 1479 aa18.42■□□□□ 0.54
APOBEC3B-204ENST00000407298 EP400Q96L91 3159 aa18.42■□□□□ 0.54
APOBEC3B-204ENST00000407298 PPLO60437 1756 aa18.42■□□□□ 0.54
APOBEC3B-204ENST00000407298 STK26Q9P289 416 aa18.41■□□□□ 0.54
APOBEC3B-204ENST00000407298 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
APOBEC3B-204ENST00000407298 UNC5CLQ8IV45 518 aa18.4■□□□□ 0.54
APOBEC3B-204ENST00000407298 ANKRD30BQ9BXX2 1392 aa18.4■□□□□ 0.54
APOBEC3B-204ENST00000407298 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
APOBEC3B-204ENST00000407298 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
APOBEC3B-204ENST00000407298 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
APOBEC3B-204ENST00000407298 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
APOBEC3B-204ENST00000407298 ADGRF5Q8IZF2 1346 aa18.38■□□□□ 0.53
APOBEC3B-204ENST00000407298 CCDC144AA2RUR9 1427 aa18.38■□□□□ 0.53
APOBEC3B-204ENST00000407298 TECPR2O15040 1411 aa18.38■□□□□ 0.53
APOBEC3B-204ENST00000407298 MARF1Q9Y4F3 1742 aaKnown RBP18.37■□□□□ 0.53
APOBEC3B-204ENST00000407298 SPATA31A3Q5VYP0 1347 aa18.37■□□□□ 0.53
APOBEC3B-204ENST00000407298 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
APOBEC3B-204ENST00000407298 PSME1Q06323 249 aa18.36■□□□□ 0.53
APOBEC3B-204ENST00000407298 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
APOBEC3B-204ENST00000407298 KRT28Q7Z3Y7 464 aa18.35■□□□□ 0.53
APOBEC3B-204ENST00000407298 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
APOBEC3B-204ENST00000407298 BLMP54132 1417 aaPredicted RBP18.33■□□□□ 0.53
APOBEC3B-204ENST00000407298 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.52
APOBEC3B-204ENST00000407298 ADRA2BP18089 450 aa18.33■□□□□ 0.52
APOBEC3B-204ENST00000407298 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
APOBEC3B-204ENST00000407298 SLIT2O94813 1529 aa18.33■□□□□ 0.52
APOBEC3B-204ENST00000407298 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.52
APOBEC3B-204ENST00000407298 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
APOBEC3B-204ENST00000407298 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
APOBEC3B-204ENST00000407298 SPATA31E1Q6ZUB1 1445 aa18.31■□□□□ 0.52
APOBEC3B-204ENST00000407298 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
APOBEC3B-204ENST00000407298 VPS72Q15906 364 aa18.3■□□□□ 0.52
APOBEC3B-204ENST00000407298 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
APOBEC3B-204ENST00000407298 YTHDC2Q9H6S0 1430 aaKnown RBP18.3■□□□□ 0.52
APOBEC3B-204ENST00000407298 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
APOBEC3B-204ENST00000407298 SEPT12Q8IYM1 358 aa18.29■□□□□ 0.52
APOBEC3B-204ENST00000407298 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
APOBEC3B-204ENST00000407298 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
APOBEC3B-204ENST00000407298 CCDC9Q9Y3X0 531 aaKnown RBP18.28■□□□□ 0.52
APOBEC3B-204ENST00000407298 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
APOBEC3B-204ENST00000407298 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.52
APOBEC3B-204ENST00000407298 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.52
APOBEC3B-204ENST00000407298 ONECUT3O60422 494 aaPredicted RBP18.27■□□□□ 0.52
APOBEC3B-204ENST00000407298 SBNO1A3KN83 1393 aa18.27■□□□□ 0.51
APOBEC3B-204ENST00000407298 ARHGEF10O15013 1369 aa18.27■□□□□ 0.51
APOBEC3B-204ENST00000407298 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
APOBEC3B-204ENST00000407298 GLI3P10071 1580 aa18.26■□□□□ 0.51
APOBEC3B-204ENST00000407298 LMOD2Q6P5Q4 547 aa18.26■□□□□ 0.51
APOBEC3B-204ENST00000407298 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
APOBEC3B-204ENST00000407298 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
APOBEC3B-204ENST00000407298 KRT27Q7Z3Y8 459 aa18.25■□□□□ 0.51
APOBEC3B-204ENST00000407298 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
APOBEC3B-204ENST00000407298 DEFB132Q7Z7B7 95 aa18.24■□□□□ 0.51
APOBEC3B-204ENST00000407298 CABLES1Q8TDN4 633 aa18.23■□□□□ 0.51
APOBEC3B-204ENST00000407298 POGKQ9P215 609 aa18.22■□□□□ 0.51
APOBEC3B-204ENST00000407298 NWD2Q9ULI1 1742 aa18.21■□□□□ 0.51
APOBEC3B-204ENST00000407298 MSH5O43196 834 aa18.21■□□□□ 0.51
APOBEC3B-204ENST00000407298 PLEKHG5O94827 1062 aa18.21■□□□□ 0.51
APOBEC3B-204ENST00000407298 PRAM1Q96QH2 718 aa18.21■□□□□ 0.51
APOBEC3B-204ENST00000407298 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
APOBEC3B-204ENST00000407298 A0A0G2JS52 829 aa18.2■□□□□ 0.5
APOBEC3B-204ENST00000407298 BAG6P46379 1132 aa18.2■□□□□ 0.5
APOBEC3B-204ENST00000407298 MYT1Q01538 1121 aa18.2■□□□□ 0.5
APOBEC3B-204ENST00000407298 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
APOBEC3B-204ENST00000407298 BRWD3Q6RI45 1802 aa18.2■□□□□ 0.5
APOBEC3B-204ENST00000407298 FAM83GA6ND36 823 aa18.19■□□□□ 0.5
APOBEC3B-204ENST00000407298 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
APOBEC3B-204ENST00000407298 ANKARQ7Z5J8 1434 aa18.18■□□□□ 0.5
APOBEC3B-204ENST00000407298 PMFBP1Q8TBY8 1022 aa18.17■□□□□ 0.5
APOBEC3B-204ENST00000407298 RGPD8O14715 1765 aaPredicted RBP18.17■□□□□ 0.5
APOBEC3B-204ENST00000407298 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
APOBEC3B-204ENST00000407298 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
APOBEC3B-204ENST00000407298 PLCH1Q4KWH8 1693 aa18.15■□□□□ 0.5
APOBEC3B-204ENST00000407298 FAM98CQ17RN3 349 aaKnown RBP18.15■□□□□ 0.5
APOBEC3B-204ENST00000407298 BTG4Q9NY30 223 aa18.15■□□□□ 0.5
APOBEC3B-204ENST00000407298 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
APOBEC3B-204ENST00000407298 LRP5O75197 1615 aa18.12■□□□□ 0.49
APOBEC3B-204ENST00000407298 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
APOBEC3B-204ENST00000407298 HRCP23327 699 aa18.1■□□□□ 0.49
APOBEC3B-204ENST00000407298 NGDNQ8NEJ9 315 aaKnown RBP18.1■□□□□ 0.49
APOBEC3B-204ENST00000407298 SPATA31A5Q5VU36 1347 aa18.09■□□□□ 0.49
APOBEC3B-204ENST00000407298 SPATA31A7Q8IWB4 1347 aa18.09■□□□□ 0.49
APOBEC3B-204ENST00000407298 PSDA5PKW4 1024 aaPredicted RBP18.09■□□□□ 0.49
APOBEC3B-204ENST00000407298 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
APOBEC3B-204ENST00000407298 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
APOBEC3B-204ENST00000407298 COL14A1Q05707 1796 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms