RNA–Protein interactions for RNA: ENST00000406936.7

COMMD6-205, Transcript of COMM domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD6, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-205ENST00000406936 TRPM2O94759 1503 aa13.11□□□□□ -0.31
COMMD6-205ENST00000406936 NRXN3Q9Y4C0 1643 aa13.11□□□□□ -0.31
COMMD6-205ENST00000406936 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
COMMD6-205ENST00000406936 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
COMMD6-205ENST00000406936 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
COMMD6-205ENST00000406936 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
COMMD6-205ENST00000406936 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
COMMD6-205ENST00000406936 CHIC2Q9UKJ5 165 aa13.11□□□□□ -0.31
COMMD6-205ENST00000406936 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
COMMD6-205ENST00000406936 DCCP43146 1447 aa13.11□□□□□ -0.31
COMMD6-205ENST00000406936 ATF3P18847 181 aa13.1□□□□□ -0.31
COMMD6-205ENST00000406936 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
COMMD6-205ENST00000406936 MST1RQ04912 1400 aa13.09□□□□□ -0.31
COMMD6-205ENST00000406936 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
COMMD6-205ENST00000406936 SRCAPQ6ZRS2 3230 aa13.08□□□□□ -0.32
COMMD6-205ENST00000406936 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-205ENST00000406936 NALCNQ8IZF0 1738 aa13.07□□□□□ -0.32
COMMD6-205ENST00000406936 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.07□□□□□ -0.32
COMMD6-205ENST00000406936 LAMC1P11047 1609 aa13.07□□□□□ -0.32
COMMD6-205ENST00000406936 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
COMMD6-205ENST00000406936 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
COMMD6-205ENST00000406936 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
COMMD6-205ENST00000406936 AMOTL2Q9Y2J4 779 aa13.06□□□□□ -0.32
COMMD6-205ENST00000406936 SETBP1Q9Y6X0 1596 aa13.05□□□□□ -0.32
COMMD6-205ENST00000406936 QTRT2Q9H974 415 aaKnown RBP13.05□□□□□ -0.32
COMMD6-205ENST00000406936 IQGAP3Q86VI3 1631 aa13.05□□□□□ -0.32
COMMD6-205ENST00000406936 C8orf37Q96NL8 207 aa13.03□□□□□ -0.32
COMMD6-205ENST00000406936 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.32
COMMD6-205ENST00000406936 DDX17Q92841 729 aaKnown RBP13.02□□□□□ -0.32
COMMD6-205ENST00000406936 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.32
COMMD6-205ENST00000406936 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.33
COMMD6-205ENST00000406936 ATAD2Q6PL18 1390 aa13.01□□□□□ -0.33
COMMD6-205ENST00000406936 ADGRL3Q9HAR2 1447 aa13.01□□□□□ -0.33
COMMD6-205ENST00000406936 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
COMMD6-205ENST00000406936 MARF1Q9Y4F3 1742 aaKnown RBP13□□□□□ -0.33
COMMD6-205ENST00000406936 COL22A1Q8NFW1 1626 aaPredicted RBP13□□□□□ -0.33
COMMD6-205ENST00000406936 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
COMMD6-205ENST00000406936 SPHKAPQ2M3C7 1700 aa12.99□□□□□ -0.33
COMMD6-205ENST00000406936 METP08581 1390 aa12.99□□□□□ -0.33
COMMD6-205ENST00000406936 EP400Q96L91 3159 aa12.98□□□□□ -0.33
COMMD6-205ENST00000406936 ADAMTS2O95450 1211 aa12.97□□□□□ -0.33
COMMD6-205ENST00000406936 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
COMMD6-205ENST00000406936 NGLY1Q96IV0 654 aa12.97□□□□□ -0.33
COMMD6-205ENST00000406936 ATRNO75882 1429 aa12.97□□□□□ -0.33
COMMD6-205ENST00000406936 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.33
COMMD6-205ENST00000406936 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
COMMD6-205ENST00000406936 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
COMMD6-205ENST00000406936 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
COMMD6-205ENST00000406936 NEXMIFQ5QGS0 1516 aa12.94□□□□□ -0.34
COMMD6-205ENST00000406936 SOS2Q07890 1332 aaPredicted RBP12.94□□□□□ -0.34
COMMD6-205ENST00000406936 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
COMMD6-205ENST00000406936 USP21Q9UK80 565 aa12.94□□□□□ -0.34
COMMD6-205ENST00000406936 BRWD3Q6RI45 1802 aa12.94□□□□□ -0.34
COMMD6-205ENST00000406936 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.93□□□□□ -0.34
COMMD6-205ENST00000406936 FAM50AQ14320 339 aaKnown RBP12.93□□□□□ -0.34
COMMD6-205ENST00000406936 TRPC5Q9UL62 973 aaPredicted RBP12.93□□□□□ -0.34
COMMD6-205ENST00000406936 MYOM2P54296 1465 aa12.92□□□□□ -0.34
COMMD6-205ENST00000406936 CLTCL1P53675 1640 aa12.92□□□□□ -0.34
COMMD6-205ENST00000406936 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
COMMD6-205ENST00000406936 LRP5O75197 1615 aa12.91□□□□□ -0.34
COMMD6-205ENST00000406936 KIF1BO60333 1816 aa12.9□□□□□ -0.34
COMMD6-205ENST00000406936 ROCK1Q13464 1354 aa12.9□□□□□ -0.34
COMMD6-205ENST00000406936 ORAI2Q96SN7 254 aa12.9□□□□□ -0.34
COMMD6-205ENST00000406936 NUP155O75694 1391 aa12.89□□□□□ -0.35
COMMD6-205ENST00000406936 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
COMMD6-205ENST00000406936 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
COMMD6-205ENST00000406936 PRAG1Q86YV5 1406 aa12.89□□□□□ -0.35
COMMD6-205ENST00000406936 GLI3P10071 1580 aa12.89□□□□□ -0.35
COMMD6-205ENST00000406936 ROBO2Q9HCK4 1378 aa12.89□□□□□ -0.35
COMMD6-205ENST00000406936 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
COMMD6-205ENST00000406936 PXDNQ92626 1479 aa12.88□□□□□ -0.35
COMMD6-205ENST00000406936 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
COMMD6-205ENST00000406936 CDC42BPGQ6DT37 1551 aa12.85□□□□□ -0.35
COMMD6-205ENST00000406936 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
COMMD6-205ENST00000406936 PPLO60437 1756 aa12.84□□□□□ -0.35
COMMD6-205ENST00000406936 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
COMMD6-205ENST00000406936 RALGAPBQ86X10 1494 aa12.83□□□□□ -0.36
COMMD6-205ENST00000406936 SLIT2O94813 1529 aa12.83□□□□□ -0.36
COMMD6-205ENST00000406936 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
COMMD6-205ENST00000406936 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
COMMD6-205ENST00000406936 HFM1A2PYH4 1435 aa12.81□□□□□ -0.36
COMMD6-205ENST00000406936 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
COMMD6-205ENST00000406936 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
COMMD6-205ENST00000406936 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
COMMD6-205ENST00000406936 DEFB132Q7Z7B7 95 aa12.8□□□□□ -0.36
COMMD6-205ENST00000406936 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
COMMD6-205ENST00000406936 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
COMMD6-205ENST00000406936 FMN2Q9NZ56 1722 aa12.78□□□□□ -0.36
COMMD6-205ENST00000406936 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
COMMD6-205ENST00000406936 RGPD8O14715 1765 aaPredicted RBP12.78□□□□□ -0.36
COMMD6-205ENST00000406936 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.36
COMMD6-205ENST00000406936 KIF1AQ12756 1690 aa12.77□□□□□ -0.37
COMMD6-205ENST00000406936 FOXO3O43524 673 aa12.77□□□□□ -0.37
COMMD6-205ENST00000406936 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
COMMD6-205ENST00000406936 KNDC1Q76NI1 1749 aa12.76□□□□□ -0.37
COMMD6-205ENST00000406936 NAIPQ13075 1403 aa12.76□□□□□ -0.37
COMMD6-205ENST00000406936 VGFO15240 615 aaPredicted RBP12.74□□□□□ -0.37
COMMD6-205ENST00000406936 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
COMMD6-205ENST00000406936 SPATA31A3Q5VYP0 1347 aa12.74□□□□□ -0.37
COMMD6-205ENST00000406936 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms