RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 NALCNQ8IZF0 1738 aa9.54□□□□□ -0.88
RPA3-204ENST00000406109 ROCK1Q13464 1354 aa9.54□□□□□ -0.88
RPA3-204ENST00000406109 ADAMTS2O95450 1211 aa9.54□□□□□ -0.88
RPA3-204ENST00000406109 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
RPA3-204ENST00000406109 NUP155O75694 1391 aa9.53□□□□□ -0.88
RPA3-204ENST00000406109 FNBP4Q8N3X1 1017 aaPredicted RBP9.53□□□□□ -0.88
RPA3-204ENST00000406109 NGLY1Q96IV0 654 aa9.53□□□□□ -0.88
RPA3-204ENST00000406109 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
RPA3-204ENST00000406109 ORAI2Q96SN7 254 aa9.52□□□□□ -0.89
RPA3-204ENST00000406109 ATAD2Q6PL18 1390 aa9.51□□□□□ -0.89
RPA3-204ENST00000406109 ATRNO75882 1429 aa9.51□□□□□ -0.89
RPA3-204ENST00000406109 USP21Q9UK80 565 aa9.51□□□□□ -0.89
RPA3-204ENST00000406109 NEXMIFQ5QGS0 1516 aa9.51□□□□□ -0.89
RPA3-204ENST00000406109 SPHKAPQ2M3C7 1700 aa9.51□□□□□ -0.89
RPA3-204ENST00000406109 SAMD1Q6SPF0 538 aaPredicted RBP9.5□□□□□ -0.89
RPA3-204ENST00000406109 TRPC5Q9UL62 973 aaPredicted RBP9.5□□□□□ -0.89
RPA3-204ENST00000406109 BCL9LQ86UU0 1499 aa9.5□□□□□ -0.89
RPA3-204ENST00000406109 ROBO2Q9HCK4 1378 aa9.5□□□□□ -0.89
RPA3-204ENST00000406109 ZNF326Q5BKZ1 582 aaKnown RBP9.49□□□□□ -0.89
RPA3-204ENST00000406109 COL22A1Q8NFW1 1626 aaPredicted RBP9.49□□□□□ -0.89
RPA3-204ENST00000406109 PTCH1Q13635 1447 aa9.48□□□□□ -0.89
RPA3-204ENST00000406109 MYOM2P54296 1465 aa9.48□□□□□ -0.89
RPA3-204ENST00000406109 PPARGC1BQ86YN6 1023 aaKnown RBP9.48□□□□□ -0.89
RPA3-204ENST00000406109 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
RPA3-204ENST00000406109 CLTCL1P53675 1640 aa9.48□□□□□ -0.89
RPA3-204ENST00000406109 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
RPA3-204ENST00000406109 PXDNQ92626 1479 aa9.46□□□□□ -0.9
RPA3-204ENST00000406109 CCDC125Q86Z20 511 aa9.45□□□□□ -0.9
RPA3-204ENST00000406109 GJD4Q96KN9 370 aaPredicted RBP9.45□□□□□ -0.9
RPA3-204ENST00000406109 MARF1Q9Y4F3 1742 aaKnown RBP9.45□□□□□ -0.9
RPA3-204ENST00000406109 KIF1BO60333 1816 aa9.44□□□□□ -0.9
RPA3-204ENST00000406109 HFM1A2PYH4 1435 aa9.43□□□□□ -0.9
RPA3-204ENST00000406109 ITGAEP38570 1179 aa9.43□□□□□ -0.9
RPA3-204ENST00000406109 BRWD3Q6RI45 1802 aa9.42□□□□□ -0.9
RPA3-204ENST00000406109 GLI3P10071 1580 aa9.42□□□□□ -0.9
RPA3-204ENST00000406109 NPHP3Q7Z494 1330 aa9.42□□□□□ -0.9
RPA3-204ENST00000406109 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
RPA3-204ENST00000406109 FOXO3O43524 673 aa9.42□□□□□ -0.9
RPA3-204ENST00000406109 XPCQ01831 940 aaPredicted RBP9.42□□□□□ -0.9
RPA3-204ENST00000406109 ESCO1Q5FWF5 840 aa9.42□□□□□ -0.9
RPA3-204ENST00000406109 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.42□□□□□ -0.9
RPA3-204ENST00000406109 SLIT2O94813 1529 aa9.41□□□□□ -0.9
RPA3-204ENST00000406109 GOLGB1Q14789 3259 aaKnown RBP9.41□□□□□ -0.9
RPA3-204ENST00000406109 RALGAPBQ86X10 1494 aa9.41□□□□□ -0.9
RPA3-204ENST00000406109 DEFB132Q7Z7B7 95 aa9.41□□□□□ -0.9
RPA3-204ENST00000406109 UNC5CLQ8IV45 518 aa9.41□□□□□ -0.9
RPA3-204ENST00000406109 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
RPA3-204ENST00000406109 BLMP54132 1417 aaPredicted RBP9.4□□□□□ -0.9
RPA3-204ENST00000406109 PPLO60437 1756 aa9.4□□□□□ -0.91
RPA3-204ENST00000406109 RPGRIP1LQ68CZ1 1315 aa9.39□□□□□ -0.91
RPA3-204ENST00000406109 WAPLQ7Z5K2 1190 aa9.39□□□□□ -0.91
RPA3-204ENST00000406109 NAIPQ13075 1403 aa9.39□□□□□ -0.91
RPA3-204ENST00000406109 SPATA31A3Q5VYP0 1347 aa9.38□□□□□ -0.91
RPA3-204ENST00000406109 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
RPA3-204ENST00000406109 MYCNP04198 464 aaPredicted RBP9.38□□□□□ -0.91
RPA3-204ENST00000406109 TECPR2O15040 1411 aa9.38□□□□□ -0.91
RPA3-204ENST00000406109 PLEKHH1Q9ULM0 1364 aa9.37□□□□□ -0.91
RPA3-204ENST00000406109 ADGRF5Q8IZF2 1346 aa9.37□□□□□ -0.91
RPA3-204ENST00000406109 NUTM2FA1L443 756 aa9.37□□□□□ -0.91
RPA3-204ENST00000406109 SEPT12Q8IYM1 358 aa9.37□□□□□ -0.91
RPA3-204ENST00000406109 LRP5O75197 1615 aa9.37□□□□□ -0.91
RPA3-204ENST00000406109 USP32Q8NFA0 1604 aa9.36□□□□□ -0.91
RPA3-204ENST00000406109 LRPPRCP42704 1394 aaKnown RBP9.36□□□□□ -0.91
RPA3-204ENST00000406109 CEP350Q5VT06 3117 aa9.35□□□□□ -0.91
RPA3-204ENST00000406109 VPS72Q15906 364 aa9.35□□□□□ -0.91
RPA3-204ENST00000406109 CABLES1Q8TDN4 633 aa9.35□□□□□ -0.91
RPA3-204ENST00000406109 ABCC11Q96J66 1382 aa9.35□□□□□ -0.91
RPA3-204ENST00000406109 RGPD8O14715 1765 aaPredicted RBP9.35□□□□□ -0.91
RPA3-204ENST00000406109 FMN2Q9NZ56 1722 aa9.34□□□□□ -0.91
RPA3-204ENST00000406109 HRCP23327 699 aa9.34□□□□□ -0.91
RPA3-204ENST00000406109 TMEM132EQ6IEE7 984 aa9.34□□□□□ -0.91
RPA3-204ENST00000406109 KRT28Q7Z3Y7 464 aa9.34□□□□□ -0.91
RPA3-204ENST00000406109 STK26Q9P289 416 aa9.34□□□□□ -0.91
RPA3-204ENST00000406109 FAM83GA6ND36 823 aa9.33□□□□□ -0.92
RPA3-204ENST00000406109 KRT27Q7Z3Y8 459 aa9.33□□□□□ -0.92
RPA3-204ENST00000406109 NWD2Q9ULI1 1742 aa9.33□□□□□ -0.92
RPA3-204ENST00000406109 PLCH1Q4KWH8 1693 aa9.32□□□□□ -0.92
RPA3-204ENST00000406109 CCDC144AA2RUR9 1427 aa9.32□□□□□ -0.92
RPA3-204ENST00000406109 SPATA31E1Q6ZUB1 1445 aa9.32□□□□□ -0.92
RPA3-204ENST00000406109 RRBP1Q9P2E9 1410 aaKnown RBP9.32□□□□□ -0.92
RPA3-204ENST00000406109 KNDC1Q76NI1 1749 aa9.32□□□□□ -0.92
RPA3-204ENST00000406109 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
RPA3-204ENST00000406109 POLA2Q14181 598 aa9.32□□□□□ -0.92
RPA3-204ENST00000406109 SLC4A1APQ9BWU0 796 aaKnown RBP9.32□□□□□ -0.92
RPA3-204ENST00000406109 KIF1AQ12756 1690 aa9.32□□□□□ -0.92
RPA3-204ENST00000406109 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
RPA3-204ENST00000406109 ABCA3Q99758 1704 aa9.31□□□□□ -0.92
RPA3-204ENST00000406109 IFT172Q9UG01 1749 aa9.31□□□□□ -0.92
RPA3-204ENST00000406109 SF3B2Q13435 895 aaKnown RBP9.31□□□□□ -0.92
RPA3-204ENST00000406109 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
RPA3-204ENST00000406109 PIK3C2GO75747 1445 aa9.31□□□□□ -0.92
RPA3-204ENST00000406109 SBNO1A3KN83 1393 aa9.3□□□□□ -0.92
RPA3-204ENST00000406109 RGL3Q3MIN7 710 aa9.3□□□□□ -0.92
RPA3-204ENST00000406109 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
RPA3-204ENST00000406109 PHF8Q9UPP1 1060 aa9.3□□□□□ -0.92
RPA3-204ENST00000406109 YTHDC2Q9H6S0 1430 aaKnown RBP9.3□□□□□ -0.92
RPA3-204ENST00000406109 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
RPA3-204ENST00000406109 NRAPQ86VF7 1730 aa9.29□□□□□ -0.92
RPA3-204ENST00000406109 EN1Q05925 392 aaPredicted RBP9.29□□□□□ -0.92
RPA3-204ENST00000406109 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms