RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 TRAK1Q9UPV9 953 aa29.9■■■□□ 2.38
PDGFA-204ENST00000405692 PLEKHH1Q9ULM0 1364 aa29.9■■■□□ 2.38
PDGFA-204ENST00000405692 CDC42BPGQ6DT37 1551 aa29.87■■■□□ 2.37
PDGFA-204ENST00000405692 BRINP3Q76B58 766 aa29.86■■■□□ 2.37
PDGFA-204ENST00000405692 CLSPNQ9HAW4 1339 aa29.85■■■□□ 2.37
PDGFA-204ENST00000405692 C1orf167Q5SNV9 1468 aa29.83■■■□□ 2.37
PDGFA-204ENST00000405692 SAFB2Q14151 953 aaKnown RBP eCLIP29.82■■■□□ 2.36
PDGFA-204ENST00000405692 NBPF1Q3BBV0 1214 aa29.8■■■□□ 2.36
PDGFA-204ENST00000405692 PHLPP1O60346 1717 aa29.78■■■□□ 2.36
PDGFA-204ENST00000405692 AHDC1Q5TGY3 1603 aaPredicted RBP29.78■■■□□ 2.36
PDGFA-204ENST00000405692 ESCO1Q5FWF5 840 aa29.74■■■□□ 2.35
PDGFA-204ENST00000405692 ORAI2Q96SN7 254 aa29.73■■■□□ 2.35
PDGFA-204ENST00000405692 ROCK2O75116 1388 aaKnown RBP29.73■■■□□ 2.35
PDGFA-204ENST00000405692 TRPM1Q7Z4N2 1603 aa29.72■■■□□ 2.35
PDGFA-204ENST00000405692 ARHGEF28Q8N1W1 1705 aaKnown RBP29.72■■■□□ 2.35
PDGFA-204ENST00000405692 MINK1Q8N4C8 1332 aaPredicted RBP29.71■■■□□ 2.35
PDGFA-204ENST00000405692 NUTM2FA1L443 756 aa29.71■■■□□ 2.35
PDGFA-204ENST00000405692 EIF3AQ14152 1382 aaKnown RBP29.71■■■□□ 2.35
PDGFA-204ENST00000405692 JCADQ9P266 1359 aa29.71■■■□□ 2.35
PDGFA-204ENST00000405692 ADGRB2O60241 1585 aa29.71■■■□□ 2.35
PDGFA-204ENST00000405692 FMN2Q9NZ56 1722 aa29.71■■■□□ 2.35
PDGFA-204ENST00000405692 CCER1Q8TC90 406 aaPredicted RBP29.7■■■□□ 2.35
PDGFA-204ENST00000405692 COL16A1Q07092 1604 aaPredicted RBP29.7■■■□□ 2.34
PDGFA-204ENST00000405692 NBPF8Q3BBV2 869 aa29.69■■■□□ 2.34
PDGFA-204ENST00000405692 TIMELESSQ9UNS1 1208 aa29.69■■■□□ 2.34
PDGFA-204ENST00000405692 NHSL1Q5SYE7 1610 aa29.68■■■□□ 2.34
PDGFA-204ENST00000405692 HIRIP3Q9BW71 556 aaPredicted RBP29.68■■■□□ 2.34
PDGFA-204ENST00000405692 LRRC59Q96AG4 307 aaKnown RBP29.67■■■□□ 2.34
PDGFA-204ENST00000405692 ANKARQ7Z5J8 1434 aa29.66■■■□□ 2.34
PDGFA-204ENST00000405692 WASLO00401 505 aaPredicted RBP29.66■■■□□ 2.34
PDGFA-204ENST00000405692 NPHP3Q7Z494 1330 aa29.66■■■□□ 2.34
PDGFA-204ENST00000405692 CENPJQ9HC77 1338 aaPredicted RBP29.66■■■□□ 2.34
PDGFA-204ENST00000405692 GPRASP1Q5JY77 1395 aa29.63■■■□□ 2.33
PDGFA-204ENST00000405692 DISP3Q9P2K9 1392 aa29.63■■■□□ 2.33
PDGFA-204ENST00000405692 DDX17Q92841 729 aaKnown RBP29.62■■■□□ 2.33
PDGFA-204ENST00000405692 SOS2Q07890 1332 aaPredicted RBP29.61■■■□□ 2.33
PDGFA-204ENST00000405692 RALGAPBQ86X10 1494 aa29.61■■■□□ 2.33
PDGFA-204ENST00000405692 CARD11Q9BXL7 1154 aa29.6■■■□□ 2.33
PDGFA-204ENST00000405692 PHF8Q9UPP1 1060 aa29.6■■■□□ 2.33
PDGFA-204ENST00000405692 SPATA31A6Q5VVP1 1343 aa29.6■■■□□ 2.33
PDGFA-204ENST00000405692 MED1Q15648 1581 aaPredicted RBP29.6■■■□□ 2.33
PDGFA-204ENST00000405692 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
PDGFA-204ENST00000405692 FOXO3O43524 673 aa29.59■■■□□ 2.33
PDGFA-204ENST00000405692 TULP4Q9NRJ4 1543 aa29.59■■■□□ 2.33
PDGFA-204ENST00000405692 CDK19Q9BWU1 502 aa29.56■■■□□ 2.32
PDGFA-204ENST00000405692 SHPRHQ149N8 1683 aa29.55■■■□□ 2.32
PDGFA-204ENST00000405692 PHF23Q9BUL5 403 aaPredicted RBP29.53■■■□□ 2.32
PDGFA-204ENST00000405692 PSME1Q06323 249 aa29.52■■■□□ 2.32
PDGFA-204ENST00000405692 NUDT16Q96DE0 195 aaKnown RBP29.51■■■□□ 2.31
PDGFA-204ENST00000405692 USP32Q8NFA0 1604 aa29.51■■■□□ 2.31
PDGFA-204ENST00000405692 QRICH2Q9H0J4 1663 aa29.5■■■□□ 2.31
PDGFA-204ENST00000405692 PRR36Q9H6K5 1346 aa29.5■■■□□ 2.31
PDGFA-204ENST00000405692 RGPD8O14715 1765 aaPredicted RBP29.5■■■□□ 2.31
PDGFA-204ENST00000405692 PXDNQ92626 1479 aa29.49■■■□□ 2.31
PDGFA-204ENST00000405692 SRPK2P78362 688 aaKnown RBP29.49■■■□□ 2.31
PDGFA-204ENST00000405692 KRT28Q7Z3Y7 464 aa29.49■■■□□ 2.31
PDGFA-204ENST00000405692 PMFBP1Q8TBY8 1022 aa29.49■■■□□ 2.31
PDGFA-204ENST00000405692 PNPLA6Q8IY17 1366 aa29.49■■■□□ 2.31
PDGFA-204ENST00000405692 EVC2Q86UK5 1308 aa29.48■■■□□ 2.31
PDGFA-204ENST00000405692 XPCQ01831 940 aaPredicted RBP29.48■■■□□ 2.31
PDGFA-204ENST00000405692 CCDC61Q9Y6R9 512 aa29.47■■■□□ 2.31
PDGFA-204ENST00000405692 ATP7BP35670 1465 aa29.47■■■□□ 2.31
PDGFA-204ENST00000405692 NGDNQ8NEJ9 315 aaKnown RBP29.45■■■□□ 2.31
PDGFA-204ENST00000405692 ITSN1Q15811 1721 aa29.45■■■□□ 2.3
PDGFA-204ENST00000405692 MEX3CQ5U5Q3 659 aaKnown RBP29.44■■■□□ 2.3
PDGFA-204ENST00000405692 NUTM2BA6NNL0 878 aaPredicted RBP29.43■■■□□ 2.3
PDGFA-204ENST00000405692 NUTM2EB1AL46 878 aaPredicted RBP29.43■■■□□ 2.3
PDGFA-204ENST00000405692 NUTM2AQ8IVF1 878 aaPredicted RBP29.43■■■□□ 2.3
PDGFA-204ENST00000405692 SBNO2Q9Y2G9 1366 aa29.42■■■□□ 2.3
PDGFA-204ENST00000405692 SBNO1A3KN83 1393 aa29.41■■■□□ 2.3
PDGFA-204ENST00000405692 CABP2Q9NPB3 220 aa29.41■■■□□ 2.3
PDGFA-204ENST00000405692 SPATA31A3Q5VYP0 1347 aa29.41■■■□□ 2.3
PDGFA-204ENST00000405692 SLC24A1O60721 1099 aa29.4■■■□□ 2.3
PDGFA-204ENST00000405692 PLEKHG3A1L390 1219 aa29.38■■■□□ 2.29
PDGFA-204ENST00000405692 LRP6O75581 1613 aa29.38■■■□□ 2.29
PDGFA-204ENST00000405692 TNS3Q68CZ2 1445 aa29.37■■■□□ 2.29
PDGFA-204ENST00000405692 COL22A1Q8NFW1 1626 aaPredicted RBP29.35■■■□□ 2.29
PDGFA-204ENST00000405692 ARHGEF10O15013 1369 aa29.35■■■□□ 2.29
PDGFA-204ENST00000405692 TOPAZ1Q8N9V7 1692 aa29.34■■■□□ 2.29
PDGFA-204ENST00000405692 POLR3AO14802 1390 aaPredicted RBP29.34■■■□□ 2.29
PDGFA-204ENST00000405692 PPIP5K1Q6PFW1 1433 aa29.34■■■□□ 2.29
PDGFA-204ENST00000405692 LMOD2Q6P5Q4 547 aa29.33■■■□□ 2.29
PDGFA-204ENST00000405692 ACEP12821 1306 aa29.33■■■□□ 2.29
PDGFA-204ENST00000405692 ATAD2Q6PL18 1390 aa29.32■■■□□ 2.28
PDGFA-204ENST00000405692 ST20-MTHFSA0A0A6YYL1 179 aa29.31■■■□□ 2.28
PDGFA-204ENST00000405692 USP47Q96K76 1375 aa29.3■■■□□ 2.28
PDGFA-204ENST00000405692 PAK3O75914 559 aaPredicted RBP29.29■■■□□ 2.28
PDGFA-204ENST00000405692 CABP1Q9NZU7 370 aa29.29■■■□□ 2.28
PDGFA-204ENST00000405692 ADAMTS2O95450 1211 aa29.28■■■□□ 2.28
PDGFA-204ENST00000405692 ZNF772Q68DY9 489 aaPredicted RBP29.28■■■□□ 2.28
PDGFA-204ENST00000405692 HAP1P54257 671 aaPredicted RBP29.27■■■□□ 2.28
PDGFA-204ENST00000405692 PUS7Q96PZ0 661 aaKnown RBP29.27■■■□□ 2.28
PDGFA-204ENST00000405692 C8orf37Q96NL8 207 aa29.26■■■□□ 2.27
PDGFA-204ENST00000405692 RGS17Q9UGC6 210 aaPredicted RBP29.26■■■□□ 2.27
PDGFA-204ENST00000405692 BRD4O60885 1362 aaPredicted RBP29.26■■■□□ 2.27
PDGFA-204ENST00000405692 TRPM3Q9HCF6 1732 aaPredicted RBP29.25■■■□□ 2.27
PDGFA-204ENST00000405692 TESK2Q96S53 571 aa29.24■■■□□ 2.27
PDGFA-204ENST00000405692 NGLY1Q96IV0 654 aa29.23■■■□□ 2.27
PDGFA-204ENST00000405692 ZNF692Q9BU19 519 aaPredicted RBP29.22■■■□□ 2.27
PDGFA-204ENST00000405692 AFF2P51816 1311 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms