RNA–Protein interactions for RNA: ENST00000405420.2

SUMF1-203, Transcript of sulfatase modifying factor 1, humanhuman

TSL 1 (best) BASIC

Gene SUMF1, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-203ENST00000405420 NRXN1Q9ULB1 1477 aa17.65■□□□□ 0.42
SUMF1-203ENST00000405420 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
SUMF1-203ENST00000405420 SIRT1Q96EB6 747 aa17.64■□□□□ 0.41
SUMF1-203ENST00000405420 NUTM2FA1L443 756 aa17.63■□□□□ 0.41
SUMF1-203ENST00000405420 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
SUMF1-203ENST00000405420 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
SUMF1-203ENST00000405420 ESCO1Q5FWF5 840 aa17.63■□□□□ 0.41
SUMF1-203ENST00000405420 POTEAQ6S8J7 498 aa17.63■□□□□ 0.41
SUMF1-203ENST00000405420 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
SUMF1-203ENST00000405420 MEX3CQ5U5Q3 659 aaKnown RBP17.62■□□□□ 0.41
SUMF1-203ENST00000405420 STAC3Q96MF2 364 aa17.6■□□□□ 0.41
SUMF1-203ENST00000405420 LRP6O75581 1613 aa17.59■□□□□ 0.41
SUMF1-203ENST00000405420 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
SUMF1-203ENST00000405420 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
SUMF1-203ENST00000405420 NHSL1Q5SYE7 1610 aa17.58■□□□□ 0.41
SUMF1-203ENST00000405420 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.4
SUMF1-203ENST00000405420 POGKQ9P215 609 aa17.58■□□□□ 0.4
SUMF1-203ENST00000405420 FOXO3O43524 673 aa17.57■□□□□ 0.4
SUMF1-203ENST00000405420 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
SUMF1-203ENST00000405420 CDC42BPGQ6DT37 1551 aa17.57■□□□□ 0.4
SUMF1-203ENST00000405420 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
SUMF1-203ENST00000405420 PNPLA6Q8IY17 1366 aa17.55■□□□□ 0.4
SUMF1-203ENST00000405420 SHPRHQ149N8 1683 aa17.55■□□□□ 0.4
SUMF1-203ENST00000405420 LAMC1P11047 1609 aa17.54■□□□□ 0.4
SUMF1-203ENST00000405420 NPHP3Q7Z494 1330 aa17.54■□□□□ 0.4
SUMF1-203ENST00000405420 XPCQ01831 940 aaPredicted RBP17.54■□□□□ 0.4
SUMF1-203ENST00000405420 ZNF772Q68DY9 489 aaPredicted RBP17.54■□□□□ 0.4
SUMF1-203ENST00000405420 ADGRB1O14514 1584 aa17.52■□□□□ 0.39
SUMF1-203ENST00000405420 ADAMTS2O95450 1211 aa17.51■□□□□ 0.39
SUMF1-203ENST00000405420 C8orf37Q96NL8 207 aa17.5■□□□□ 0.39
SUMF1-203ENST00000405420 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
SUMF1-203ENST00000405420 DLC1Q96QB1 1528 aa17.5■□□□□ 0.39
SUMF1-203ENST00000405420 AFF2P51816 1311 aa17.49■□□□□ 0.39
SUMF1-203ENST00000405420 MINK1Q8N4C8 1332 aaPredicted RBP17.49■□□□□ 0.39
SUMF1-203ENST00000405420 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
SUMF1-203ENST00000405420 PHF8Q9UPP1 1060 aa17.49■□□□□ 0.39
SUMF1-203ENST00000405420 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
SUMF1-203ENST00000405420 NGLY1Q96IV0 654 aa17.47■□□□□ 0.39
SUMF1-203ENST00000405420 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
SUMF1-203ENST00000405420 PXDNQ92626 1479 aa17.46■□□□□ 0.39
SUMF1-203ENST00000405420 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
SUMF1-203ENST00000405420 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.39
SUMF1-203ENST00000405420 WASLO00401 505 aaPredicted RBP17.45■□□□□ 0.38
SUMF1-203ENST00000405420 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
SUMF1-203ENST00000405420 L3MBTL2Q969R5 705 aa17.45■□□□□ 0.38
SUMF1-203ENST00000405420 RXRBP28702 533 aa17.44■□□□□ 0.38
SUMF1-203ENST00000405420 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
SUMF1-203ENST00000405420 PSME1Q06323 249 aa17.43■□□□□ 0.38
SUMF1-203ENST00000405420 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
SUMF1-203ENST00000405420 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
SUMF1-203ENST00000405420 ANKARQ7Z5J8 1434 aa17.4■□□□□ 0.38
SUMF1-203ENST00000405420 TRIM26Q12899 539 aaPredicted RBP17.4■□□□□ 0.38
SUMF1-203ENST00000405420 USP21Q9UK80 565 aa17.4■□□□□ 0.38
SUMF1-203ENST00000405420 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
SUMF1-203ENST00000405420 RGPD8O14715 1765 aaPredicted RBP17.39■□□□□ 0.37
SUMF1-203ENST00000405420 LMOD2Q6P5Q4 547 aa17.39■□□□□ 0.37
SUMF1-203ENST00000405420 FNBP4Q8N3X1 1017 aaPredicted RBP17.39■□□□□ 0.37
SUMF1-203ENST00000405420 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
SUMF1-203ENST00000405420 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
SUMF1-203ENST00000405420 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
SUMF1-203ENST00000405420 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
SUMF1-203ENST00000405420 COL22A1Q8NFW1 1626 aaPredicted RBP17.37■□□□□ 0.37
SUMF1-203ENST00000405420 RBM6P78332 1123 aaKnown RBP17.37■□□□□ 0.37
SUMF1-203ENST00000405420 CABLES1Q8TDN4 633 aa17.37■□□□□ 0.37
SUMF1-203ENST00000405420 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
SUMF1-203ENST00000405420 USP32Q8NFA0 1604 aa17.36■□□□□ 0.37
SUMF1-203ENST00000405420 NGDNQ8NEJ9 315 aaKnown RBP17.36■□□□□ 0.37
SUMF1-203ENST00000405420 SBNO1A3KN83 1393 aa17.36■□□□□ 0.37
SUMF1-203ENST00000405420 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
SUMF1-203ENST00000405420 TNS3Q68CZ2 1445 aa17.35■□□□□ 0.37
SUMF1-203ENST00000405420 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
SUMF1-203ENST00000405420 HAP1P54257 671 aaPredicted RBP17.34■□□□□ 0.37
SUMF1-203ENST00000405420 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
SUMF1-203ENST00000405420 ARHGEF28Q8N1W1 1705 aaKnown RBP17.34■□□□□ 0.37
SUMF1-203ENST00000405420 KIAA1210Q9ULL0 1709 aa17.34■□□□□ 0.37
SUMF1-203ENST00000405420 CENPJQ9HC77 1338 aaPredicted RBP17.32■□□□□ 0.36
SUMF1-203ENST00000405420 ARHGEF10O15013 1369 aa17.31■□□□□ 0.36
SUMF1-203ENST00000405420 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
SUMF1-203ENST00000405420 CCDC61Q9Y6R9 512 aa17.31■□□□□ 0.36
SUMF1-203ENST00000405420 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
SUMF1-203ENST00000405420 BCL9LQ86UU0 1499 aa17.3■□□□□ 0.36
SUMF1-203ENST00000405420 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
SUMF1-203ENST00000405420 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
SUMF1-203ENST00000405420 ATP7BP35670 1465 aa17.29■□□□□ 0.36
SUMF1-203ENST00000405420 UNC5CLQ8IV45 518 aa17.28■□□□□ 0.36
SUMF1-203ENST00000405420 UPF1Q92900 1129 aaKnown RBP eCLIP17.28■□□□□ 0.36
SUMF1-203ENST00000405420 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
SUMF1-203ENST00000405420 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
SUMF1-203ENST00000405420 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
SUMF1-203ENST00000405420 RGS12O14924 1447 aa17.27■□□□□ 0.35
SUMF1-203ENST00000405420 ATRNO75882 1429 aa17.27■□□□□ 0.35
SUMF1-203ENST00000405420 ACEP12821 1306 aa17.26■□□□□ 0.35
SUMF1-203ENST00000405420 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
SUMF1-203ENST00000405420 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
SUMF1-203ENST00000405420 SLIT2O94813 1529 aa17.25■□□□□ 0.35
SUMF1-203ENST00000405420 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
SUMF1-203ENST00000405420 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
SUMF1-203ENST00000405420 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
SUMF1-203ENST00000405420 POLR3AO14802 1390 aaPredicted RBP17.23■□□□□ 0.35
SUMF1-203ENST00000405420 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms