RNA–Protein interactions for RNA: ENST00000404666.6

VSNL1-202, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene VSNL1, Length 992 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-202ENST00000404666 PLEKHH1Q9ULM0 1364 aa16.66■□□□□ 0.26
VSNL1-202ENST00000404666 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
VSNL1-202ENST00000404666 COL16A1Q07092 1604 aaPredicted RBP16.66■□□□□ 0.26
VSNL1-202ENST00000404666 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
VSNL1-202ENST00000404666 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
VSNL1-202ENST00000404666 STK26Q9P289 416 aa16.65■□□□□ 0.26
VSNL1-202ENST00000404666 C1orf167Q5SNV9 1468 aa16.64■□□□□ 0.25
VSNL1-202ENST00000404666 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
VSNL1-202ENST00000404666 NEUROD1Q13562 356 aa16.62■□□□□ 0.25
VSNL1-202ENST00000404666 BRINP3Q76B58 766 aa16.62■□□□□ 0.25
VSNL1-202ENST00000404666 GPRASP1Q5JY77 1395 aa16.61■□□□□ 0.25
VSNL1-202ENST00000404666 PRAM1Q96QH2 718 aa16.6■□□□□ 0.25
VSNL1-202ENST00000404666 KIF1AQ12756 1690 aa16.59■□□□□ 0.25
VSNL1-202ENST00000404666 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
VSNL1-202ENST00000404666 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
VSNL1-202ENST00000404666 RGPD8O14715 1765 aaPredicted RBP16.59■□□□□ 0.25
VSNL1-202ENST00000404666 NBPF1Q3BBV0 1214 aa16.58■□□□□ 0.24
VSNL1-202ENST00000404666 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
VSNL1-202ENST00000404666 USP32Q8NFA0 1604 aa16.58■□□□□ 0.24
VSNL1-202ENST00000404666 RALGAPBQ86X10 1494 aa16.57■□□□□ 0.24
VSNL1-202ENST00000404666 ANKARQ7Z5J8 1434 aa16.57■□□□□ 0.24
VSNL1-202ENST00000404666 TIMELESSQ9UNS1 1208 aa16.56■□□□□ 0.24
VSNL1-202ENST00000404666 POGKQ9P215 609 aa16.55■□□□□ 0.24
VSNL1-202ENST00000404666 QRICH2Q9H0J4 1663 aa16.55■□□□□ 0.24
VSNL1-202ENST00000404666 MED1Q15648 1581 aaPredicted RBP16.55■□□□□ 0.24
VSNL1-202ENST00000404666 TULP4Q9NRJ4 1543 aa16.55■□□□□ 0.24
VSNL1-202ENST00000404666 EIF3AQ14152 1382 aaKnown RBP16.54■□□□□ 0.24
VSNL1-202ENST00000404666 ITSN1Q15811 1721 aa16.54■□□□□ 0.24
VSNL1-202ENST00000404666 NBPF8Q3BBV2 869 aa16.54■□□□□ 0.24
VSNL1-202ENST00000404666 JCADQ9P266 1359 aa16.53■□□□□ 0.24
VSNL1-202ENST00000404666 ROCK2O75116 1388 aaKnown RBP16.52■□□□□ 0.24
VSNL1-202ENST00000404666 ORAI2Q96SN7 254 aa16.52■□□□□ 0.24
VSNL1-202ENST00000404666 TOPAZ1Q8N9V7 1692 aa16.52■□□□□ 0.23
VSNL1-202ENST00000404666 SOS2Q07890 1332 aaPredicted RBP16.51■□□□□ 0.23
VSNL1-202ENST00000404666 PXDNQ92626 1479 aa16.51■□□□□ 0.23
VSNL1-202ENST00000404666 ATP7BP35670 1465 aa16.5■□□□□ 0.23
VSNL1-202ENST00000404666 SAFB2Q14151 953 aaKnown RBP eCLIP16.5■□□□□ 0.23
VSNL1-202ENST00000404666 COL22A1Q8NFW1 1626 aaPredicted RBP16.49■□□□□ 0.23
VSNL1-202ENST00000404666 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
VSNL1-202ENST00000404666 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
VSNL1-202ENST00000404666 CENPJQ9HC77 1338 aaPredicted RBP16.48■□□□□ 0.23
VSNL1-202ENST00000404666 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
VSNL1-202ENST00000404666 MINK1Q8N4C8 1332 aaPredicted RBP16.47■□□□□ 0.23
VSNL1-202ENST00000404666 ESCO1Q5FWF5 840 aa16.47■□□□□ 0.23
VSNL1-202ENST00000404666 SPATA31A6Q5VVP1 1343 aa16.46■□□□□ 0.23
VSNL1-202ENST00000404666 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
VSNL1-202ENST00000404666 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
VSNL1-202ENST00000404666 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
VSNL1-202ENST00000404666 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
VSNL1-202ENST00000404666 PNPLA6Q8IY17 1366 aa16.44■□□□□ 0.22
VSNL1-202ENST00000404666 NUTM2FA1L443 756 aa16.43■□□□□ 0.22
VSNL1-202ENST00000404666 DDX17Q92841 729 aaKnown RBP16.43■□□□□ 0.22
VSNL1-202ENST00000404666 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
VSNL1-202ENST00000404666 LRP6O75581 1613 aa16.42■□□□□ 0.22
VSNL1-202ENST00000404666 CARD11Q9BXL7 1154 aa16.42■□□□□ 0.22
VSNL1-202ENST00000404666 ALS2Q96Q42 1657 aa16.41■□□□□ 0.22
VSNL1-202ENST00000404666 FOXO3O43524 673 aa16.41■□□□□ 0.22
VSNL1-202ENST00000404666 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
VSNL1-202ENST00000404666 CDK19Q9BWU1 502 aa16.41■□□□□ 0.22
VSNL1-202ENST00000404666 SBNO1A3KN83 1393 aa16.4■□□□□ 0.22
VSNL1-202ENST00000404666 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
VSNL1-202ENST00000404666 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
VSNL1-202ENST00000404666 MARF1Q9Y4F3 1742 aaKnown RBP16.39■□□□□ 0.21
VSNL1-202ENST00000404666 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
VSNL1-202ENST00000404666 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
VSNL1-202ENST00000404666 ABCA3Q99758 1704 aa16.38■□□□□ 0.21
VSNL1-202ENST00000404666 SPATA31A3Q5VYP0 1347 aa16.38■□□□□ 0.21
VSNL1-202ENST00000404666 TNS3Q68CZ2 1445 aa16.37■□□□□ 0.21
VSNL1-202ENST00000404666 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
VSNL1-202ENST00000404666 EVC2Q86UK5 1308 aa16.37■□□□□ 0.21
VSNL1-202ENST00000404666 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
VSNL1-202ENST00000404666 PSME1Q06323 249 aa16.35■□□□□ 0.21
VSNL1-202ENST00000404666 KRT28Q7Z3Y7 464 aa16.35■□□□□ 0.21
VSNL1-202ENST00000404666 AKAP12Q02952 1782 aa16.35■□□□□ 0.21
VSNL1-202ENST00000404666 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
VSNL1-202ENST00000404666 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
VSNL1-202ENST00000404666 BRD4O60885 1362 aaPredicted RBP16.34■□□□□ 0.21
VSNL1-202ENST00000404666 PPIP5K1Q6PFW1 1433 aa16.34■□□□□ 0.21
VSNL1-202ENST00000404666 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
VSNL1-202ENST00000404666 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
VSNL1-202ENST00000404666 SRPK2P78362 688 aaKnown RBP16.32■□□□□ 0.2
VSNL1-202ENST00000404666 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
VSNL1-202ENST00000404666 ATAD2Q6PL18 1390 aa16.32■□□□□ 0.2
VSNL1-202ENST00000404666 USP47Q96K76 1375 aa16.32■□□□□ 0.2
VSNL1-202ENST00000404666 TESK2Q96S53 571 aa16.32■□□□□ 0.2
VSNL1-202ENST00000404666 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
VSNL1-202ENST00000404666 RGS17Q9UGC6 210 aaPredicted RBP16.31■□□□□ 0.2
VSNL1-202ENST00000404666 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
VSNL1-202ENST00000404666 ACEP12821 1306 aa16.3■□□□□ 0.2
VSNL1-202ENST00000404666 NGDNQ8NEJ9 315 aaKnown RBP16.3■□□□□ 0.2
VSNL1-202ENST00000404666 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
VSNL1-202ENST00000404666 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
VSNL1-202ENST00000404666 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
VSNL1-202ENST00000404666 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
VSNL1-202ENST00000404666 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.28■□□□□ 0.2
VSNL1-202ENST00000404666 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
VSNL1-202ENST00000404666 USP6P35125 1406 aa16.28■□□□□ 0.2
VSNL1-202ENST00000404666 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.2
VSNL1-202ENST00000404666 CABP1Q9NZU7 370 aa16.26■□□□□ 0.19
VSNL1-202ENST00000404666 USP54Q70EL1 1684 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms