RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
NUP43-204ENST00000403890 DAPK1P53355 1430 aa14.58□□□□□ -0.07
NUP43-204ENST00000403890 MST1RQ04912 1400 aa14.58□□□□□ -0.07
NUP43-204ENST00000403890 TMEM131LA2VDJ0 1609 aa14.57□□□□□ -0.08
NUP43-204ENST00000403890 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
NUP43-204ENST00000403890 MYO5BQ9ULV0 1848 aa14.57□□□□□ -0.08
NUP43-204ENST00000403890 PTPRUQ92729 1446 aa14.57□□□□□ -0.08
NUP43-204ENST00000403890 NHSL1Q5SYE7 1610 aa14.55□□□□□ -0.08
NUP43-204ENST00000403890 CROCC2H7BZ55 1655 aa14.55□□□□□ -0.08
NUP43-204ENST00000403890 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
NUP43-204ENST00000403890 TRPM2O94759 1503 aa14.55□□□□□ -0.08
NUP43-204ENST00000403890 GCC2Q8IWJ2 1684 aa14.54□□□□□ -0.08
NUP43-204ENST00000403890 EP400Q96L91 3159 aa14.54□□□□□ -0.08
NUP43-204ENST00000403890 VPS8Q8N3P4 1428 aa14.53□□□□□ -0.08
NUP43-204ENST00000403890 ATRNO75882 1429 aa14.52□□□□□ -0.08
NUP43-204ENST00000403890 PTPN23Q9H3S7 1636 aa14.52□□□□□ -0.09
NUP43-204ENST00000403890 PTCH1Q13635 1447 aa14.5□□□□□ -0.09
NUP43-204ENST00000403890 SOS2Q07890 1332 aaPredicted RBP14.49□□□□□ -0.09
NUP43-204ENST00000403890 HAX1O00165 279 aa14.49□□□□□ -0.09
NUP43-204ENST00000403890 ADGRL3Q9HAR2 1447 aa14.49□□□□□ -0.09
NUP43-204ENST00000403890 GJD4Q96KN9 370 aaPredicted RBP14.48□□□□□ -0.09
NUP43-204ENST00000403890 BLMP54132 1417 aaPredicted RBP14.48□□□□□ -0.09
NUP43-204ENST00000403890 ANKRD50Q9ULJ7 1429 aa14.48□□□□□ -0.09
NUP43-204ENST00000403890 C1orf167Q5SNV9 1468 aa14.46□□□□□ -0.09
NUP43-204ENST00000403890 SF3B2Q13435 895 aaKnown RBP14.46□□□□□ -0.09
NUP43-204ENST00000403890 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.09
NUP43-204ENST00000403890 ORAI2Q96SN7 254 aa14.46□□□□□ -0.09
NUP43-204ENST00000403890 XRN1Q8IZH2 1706 aaKnown RBP14.46□□□□□ -0.1
NUP43-204ENST00000403890 METP08581 1390 aa14.46□□□□□ -0.1
NUP43-204ENST00000403890 BCL9LQ86UU0 1499 aa14.45□□□□□ -0.1
NUP43-204ENST00000403890 UNC13BO14795 1591 aa14.45□□□□□ -0.1
NUP43-204ENST00000403890 ADGRL2O95490 1459 aa14.44□□□□□ -0.1
NUP43-204ENST00000403890 LRP5O75197 1615 aa14.41□□□□□ -0.1
NUP43-204ENST00000403890 LAMC1P11047 1609 aa14.41□□□□□ -0.1
NUP43-204ENST00000403890 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
NUP43-204ENST00000403890 ZNF326Q5BKZ1 582 aaKnown RBP14.4□□□□□ -0.1
NUP43-204ENST00000403890 NRXN3Q9Y4C0 1643 aa14.4□□□□□ -0.1
NUP43-204ENST00000403890 MYOM2P54296 1465 aa14.39□□□□□ -0.11
NUP43-204ENST00000403890 HRCP23327 699 aa14.39□□□□□ -0.11
NUP43-204ENST00000403890 UNC5CLQ8IV45 518 aa14.39□□□□□ -0.11
NUP43-204ENST00000403890 PSDA5PKW4 1024 aaPredicted RBP14.38□□□□□ -0.11
NUP43-204ENST00000403890 FAM50AQ14320 339 aaKnown RBP14.38□□□□□ -0.11
NUP43-204ENST00000403890 NPHP3Q7Z494 1330 aa14.38□□□□□ -0.11
NUP43-204ENST00000403890 NALCNQ8IZF0 1738 aa14.38□□□□□ -0.11
NUP43-204ENST00000403890 COL22A1Q8NFW1 1626 aaPredicted RBP14.37□□□□□ -0.11
NUP43-204ENST00000403890 E9PCH4 1651 aa14.37□□□□□ -0.11
NUP43-204ENST00000403890 RALGAPBQ86X10 1494 aa14.37□□□□□ -0.11
NUP43-204ENST00000403890 ESCO1Q5FWF5 840 aa14.36□□□□□ -0.11
NUP43-204ENST00000403890 SEPT12Q8IYM1 358 aa14.36□□□□□ -0.11
NUP43-204ENST00000403890 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
NUP43-204ENST00000403890 FOXO3O43524 673 aa14.34□□□□□ -0.11
NUP43-204ENST00000403890 BAG6P46379 1132 aa14.34□□□□□ -0.11
NUP43-204ENST00000403890 NUP155O75694 1391 aa14.34□□□□□ -0.11
NUP43-204ENST00000403890 ROBO2Q9HCK4 1378 aa14.34□□□□□ -0.11
NUP43-204ENST00000403890 XPCQ01831 940 aaPredicted RBP14.33□□□□□ -0.12
NUP43-204ENST00000403890 KRT27Q7Z3Y8 459 aa14.33□□□□□ -0.12
NUP43-204ENST00000403890 GLI3P10071 1580 aa14.32□□□□□ -0.12
NUP43-204ENST00000403890 LOC105371045A0A1W2PR82 267 aa14.32□□□□□ -0.12
NUP43-204ENST00000403890 ONECUT3O60422 494 aaPredicted RBP14.32□□□□□ -0.12
NUP43-204ENST00000403890 CLEC11AQ9Y240 323 aa14.32□□□□□ -0.12
NUP43-204ENST00000403890 IQGAP3Q86VI3 1631 aa14.32□□□□□ -0.12
NUP43-204ENST00000403890 SLIT2O94813 1529 aa14.31□□□□□ -0.12
NUP43-204ENST00000403890 YY1P25490 414 aa14.31□□□□□ -0.12
NUP43-204ENST00000403890 LRPPRCP42704 1394 aaKnown RBP14.31□□□□□ -0.12
NUP43-204ENST00000403890 MARF1Q9Y4F3 1742 aaKnown RBP14.3□□□□□ -0.12
NUP43-204ENST00000403890 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
NUP43-204ENST00000403890 VPS72Q15906 364 aa14.3□□□□□ -0.12
NUP43-204ENST00000403890 SSUH2Q9Y2M2 353 aa14.3□□□□□ -0.12
NUP43-204ENST00000403890 PXDNQ92626 1479 aa14.3□□□□□ -0.12
NUP43-204ENST00000403890 SPHKAPQ2M3C7 1700 aa14.29□□□□□ -0.12
NUP43-204ENST00000403890 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.29□□□□□ -0.12
NUP43-204ENST00000403890 CCDC9Q9Y3X0 531 aaKnown RBP14.29□□□□□ -0.12
NUP43-204ENST00000403890 BRWD3Q6RI45 1802 aa14.29□□□□□ -0.12
NUP43-204ENST00000403890 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
NUP43-204ENST00000403890 VGFO15240 615 aaPredicted RBP14.28□□□□□ -0.12
NUP43-204ENST00000403890 R3HDM1Q15032 1099 aaKnown RBP14.28□□□□□ -0.12
NUP43-204ENST00000403890 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
NUP43-204ENST00000403890 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
NUP43-204ENST00000403890 HAP1P54257 671 aaPredicted RBP14.26□□□□□ -0.13
NUP43-204ENST00000403890 EN1Q05925 392 aaPredicted RBP14.26□□□□□ -0.13
NUP43-204ENST00000403890 PRAG1Q86YV5 1406 aa14.25□□□□□ -0.13
NUP43-204ENST00000403890 ROCK1Q13464 1354 aa14.25□□□□□ -0.13
NUP43-204ENST00000403890 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
NUP43-204ENST00000403890 A0A0G2JS52 829 aa14.24□□□□□ -0.13
NUP43-204ENST00000403890 MYT1Q01538 1121 aa14.24□□□□□ -0.13
NUP43-204ENST00000403890 NUTM2FA1L443 756 aa14.23□□□□□ -0.13
NUP43-204ENST00000403890 KRT28Q7Z3Y7 464 aa14.22□□□□□ -0.13
NUP43-204ENST00000403890 CABLES1Q8TDN4 633 aa14.21□□□□□ -0.13
NUP43-204ENST00000403890 CDC42BPGQ6DT37 1551 aa14.21□□□□□ -0.14
NUP43-204ENST00000403890 FAM98CQ17RN3 349 aaKnown RBP14.2□□□□□ -0.14
NUP43-204ENST00000403890 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
NUP43-204ENST00000403890 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
NUP43-204ENST00000403890 NAIPQ13075 1403 aa14.19□□□□□ -0.14
NUP43-204ENST00000403890 FAM83GA6ND36 823 aa14.19□□□□□ -0.14
NUP43-204ENST00000403890 RPGRIP1LQ68CZ1 1315 aa14.18□□□□□ -0.14
NUP43-204ENST00000403890 PLEKHG5O94827 1062 aa14.18□□□□□ -0.14
NUP43-204ENST00000403890 PSME1Q06323 249 aa14.18□□□□□ -0.14
NUP43-204ENST00000403890 EZH2Q15910 746 aaKnown RBP14.17□□□□□ -0.14
NUP43-204ENST00000403890 FAM182BQ5T319 152 aa14.17□□□□□ -0.14
NUP43-204ENST00000403890 WAPLQ7Z5K2 1190 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms