RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 TRIM29Q14134 588 aa20.28■□□□□ 0.84
TSC2-204ENST00000401874 FRAT2O75474 233 aaPredicted RBP20.28■□□□□ 0.84
TSC2-204ENST00000401874 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
TSC2-204ENST00000401874 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
TSC2-204ENST00000401874 VPS37CA5D8V6 355 aaPredicted RBP20.28■□□□□ 0.84
TSC2-204ENST00000401874 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
TSC2-204ENST00000401874 GPS2Q13227 327 aa20.27■□□□□ 0.84
TSC2-204ENST00000401874 GCC1Q96CN9 775 aa20.27■□□□□ 0.83
TSC2-204ENST00000401874 CCDC39Q9UFE4 941 aa20.27■□□□□ 0.83
TSC2-204ENST00000401874 SASS6Q6UVJ0 657 aa20.26■□□□□ 0.83
TSC2-204ENST00000401874 CPLX1O14810 134 aa20.26■□□□□ 0.83
TSC2-204ENST00000401874 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
TSC2-204ENST00000401874 TPM2P07951 284 aa20.25■□□□□ 0.83
TSC2-204ENST00000401874 NBPF1Q3BBV0 1214 aa20.25■□□□□ 0.83
TSC2-204ENST00000401874 ZNF592Q92610 1267 aa20.25■□□□□ 0.83
TSC2-204ENST00000401874 CFAP70Q5T0N1 1121 aa20.25■□□□□ 0.83
TSC2-204ENST00000401874 FAM13BQ9NYF5 915 aa20.25■□□□□ 0.83
TSC2-204ENST00000401874 SUPT6HQ7KZ85 1726 aaKnown RBP20.25■□□□□ 0.83
TSC2-204ENST00000401874 EXOSC9Q06265 439 aaKnown RBP20.24■□□□□ 0.83
TSC2-204ENST00000401874 HOOK1Q9UJC3 728 aaKnown RBP20.24■□□□□ 0.83
TSC2-204ENST00000401874 PES1O00541 588 aaKnown RBP20.24■□□□□ 0.83
TSC2-204ENST00000401874 RABEP1Q15276 862 aa20.24■□□□□ 0.83
TSC2-204ENST00000401874 DAPK1P53355 1430 aa20.24■□□□□ 0.83
TSC2-204ENST00000401874 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.24■□□□□ 0.83
TSC2-204ENST00000401874 ERBINQ96RT1 1412 aa20.23■□□□□ 0.83
TSC2-204ENST00000401874 MBD3O95983 291 aa20.23■□□□□ 0.83
TSC2-204ENST00000401874 MCM2P49736 904 aa20.23■□□□□ 0.83
TSC2-204ENST00000401874 PLEKHH2Q8IVE3 1493 aa20.23■□□□□ 0.83
TSC2-204ENST00000401874 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
TSC2-204ENST00000401874 MARCH6O60337 910 aa20.23■□□□□ 0.83
TSC2-204ENST00000401874 UBTFL1P0CB47 393 aaPredicted RBP20.23■□□□□ 0.83
TSC2-204ENST00000401874 GTF2E1P29083 439 aaPredicted RBP20.23■□□□□ 0.83
TSC2-204ENST00000401874 WDR63Q8IWG1 891 aa20.22■□□□□ 0.83
TSC2-204ENST00000401874 CCAR2Q8N163 923 aaKnown RBP20.22■□□□□ 0.83
TSC2-204ENST00000401874 GNAI3P08754 354 aa20.22■□□□□ 0.83
TSC2-204ENST00000401874 TROQ12816 1431 aaPredicted RBP20.22■□□□□ 0.83
TSC2-204ENST00000401874 LETM1O95202 739 aaPredicted RBP20.22■□□□□ 0.83
TSC2-204ENST00000401874 CCDC70Q6NSX1 233 aa20.21■□□□□ 0.83
TSC2-204ENST00000401874 CCDC73Q6ZRK6 1079 aa20.21■□□□□ 0.83
TSC2-204ENST00000401874 TRDNQ13061 729 aa20.21■□□□□ 0.83
TSC2-204ENST00000401874 BCAR3O75815 825 aa20.2■□□□□ 0.83
TSC2-204ENST00000401874 CNTROBQ8N137 903 aa20.2■□□□□ 0.82
TSC2-204ENST00000401874 ANKRD20A12PQ8NF67 263 aa20.2■□□□□ 0.82
TSC2-204ENST00000401874 PSMA5P28066 241 aa20.19■□□□□ 0.82
TSC2-204ENST00000401874 ZNF771Q7L3S4 317 aaPredicted RBP20.19■□□□□ 0.82
TSC2-204ENST00000401874 PRKAR2BP31323 418 aa20.18■□□□□ 0.82
TSC2-204ENST00000401874 CCDC184Q52MB2 194 aa20.18■□□□□ 0.82
TSC2-204ENST00000401874 MTERF4Q7Z6M4 381 aaKnown RBP20.18■□□□□ 0.82
TSC2-204ENST00000401874 HOMER1Q86YM7 354 aa20.18■□□□□ 0.82
TSC2-204ENST00000401874 NAIPQ13075 1403 aa20.18■□□□□ 0.82
TSC2-204ENST00000401874 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
TSC2-204ENST00000401874 CCDC173Q0VFZ6 552 aa20.17■□□□□ 0.82
TSC2-204ENST00000401874 TWISTNBQ3B726 338 aaPredicted RBP20.17■□□□□ 0.82
TSC2-204ENST00000401874 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
TSC2-204ENST00000401874 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
TSC2-204ENST00000401874 CEP89Q96ST8 783 aa20.17■□□□□ 0.82
TSC2-204ENST00000401874 CAVIN1Q6NZI2 390 aaKnown RBP20.16■□□□□ 0.82
TSC2-204ENST00000401874 CCDC47Q96A33 483 aaKnown RBP20.16■□□□□ 0.82
TSC2-204ENST00000401874 IPO7O95373 1038 aaKnown RBP20.16■□□□□ 0.82
TSC2-204ENST00000401874 APPP05067 770 aa20.16■□□□□ 0.82
TSC2-204ENST00000401874 PSME1Q06323 249 aa20.16■□□□□ 0.82
TSC2-204ENST00000401874 IFT57Q9NWB7 429 aa20.16■□□□□ 0.82
TSC2-204ENST00000401874 G3V3G9 751 aa20.16■□□□□ 0.82
TSC2-204ENST00000401874 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
TSC2-204ENST00000401874 GAS2L2Q8NHY3 880 aa20.15■□□□□ 0.82
TSC2-204ENST00000401874 TEX35Q5T0J7 233 aa20.15■□□□□ 0.82
TSC2-204ENST00000401874 BRPF3Q9ULD4 1205 aa20.15■□□□□ 0.82
TSC2-204ENST00000401874 MVPQ14764 893 aaKnown RBP20.15■□□□□ 0.82
TSC2-204ENST00000401874 CWC22Q9HCG8 908 aaKnown RBP20.15■□□□□ 0.82
TSC2-204ENST00000401874 HMGXB3Q12766 1538 aa20.14■□□□□ 0.82
TSC2-204ENST00000401874 AFAP1Q8N556 730 aa20.14■□□□□ 0.81
TSC2-204ENST00000401874 NAT10Q9H0A0 1025 aaKnown RBP20.14■□□□□ 0.81
TSC2-204ENST00000401874 R3HCC1Q9Y3T6 440 aaKnown RBP20.14■□□□□ 0.81
TSC2-204ENST00000401874 PRG4Q92954 1404 aaPredicted RBP20.14■□□□□ 0.81
TSC2-204ENST00000401874 NEK4P51957 841 aa20.13■□□□□ 0.81
TSC2-204ENST00000401874 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
TSC2-204ENST00000401874 AMOTL1Q8IY63 956 aa20.13■□□□□ 0.81
TSC2-204ENST00000401874 CLASRPQ8N2M8 674 aaKnown RBP20.13■□□□□ 0.81
TSC2-204ENST00000401874 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
TSC2-204ENST00000401874 NFXL1Q6ZNB6 911 aa20.12■□□□□ 0.81
TSC2-204ENST00000401874 RIC3Q7Z5B4 369 aa20.12■□□□□ 0.81
TSC2-204ENST00000401874 ATF7IPQ6VMQ6 1270 aa20.12■□□□□ 0.81
TSC2-204ENST00000401874 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
TSC2-204ENST00000401874 HIP1O00291 1037 aa20.12■□□□□ 0.81
TSC2-204ENST00000401874 SETQ01105 290 aaPredicted RBP20.12■□□□□ 0.81
TSC2-204ENST00000401874 ARGLU1Q9NWB6 273 aaPredicted RBP20.12■□□□□ 0.81
TSC2-204ENST00000401874 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
TSC2-204ENST00000401874 PRPF40AO75400 957 aaKnown RBP20.11■□□□□ 0.81
TSC2-204ENST00000401874 SAFBQ15424 915 aaKnown RBP eCLIP20.11■□□□□ 0.81
TSC2-204ENST00000401874 RNF214Q8ND24 703 aa20.11■□□□□ 0.81
TSC2-204ENST00000401874 ERICH2A1L162 156 aa20.11■□□□□ 0.81
TSC2-204ENST00000401874 EVA1CP58658 441 aa20.11■□□□□ 0.81
TSC2-204ENST00000401874 K7ELQ4 463 aaPredicted RBP20.1■□□□□ 0.81
TSC2-204ENST00000401874 GNAI2P04899 355 aa20.1■□□□□ 0.81
TSC2-204ENST00000401874 PDCP20941 246 aa20.1■□□□□ 0.81
TSC2-204ENST00000401874 RALYLQ86SE5 291 aaKnown RBP20.1■□□□□ 0.81
TSC2-204ENST00000401874 MAP3K1Q13233 1512 aa20.1■□□□□ 0.81
TSC2-204ENST00000401874 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
TSC2-204ENST00000401874 SURF6O75683 361 aaKnown RBP20.1■□□□□ 0.81
TSC2-204ENST00000401874 VPS53Q5VIR6 699 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms