RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 CROCC2H7BZ55 1655 aa8.5□□□□□ -1.05
CLIP4-202ENST00000401605 SLIT1O75093 1534 aa8.5□□□□□ -1.05
CLIP4-202ENST00000401605 NOS1P29475 1434 aa8.5□□□□□ -1.05
CLIP4-202ENST00000401605 VWDEQ8N2E2 1590 aa8.5□□□□□ -1.05
CLIP4-202ENST00000401605 MIER1Q8N108 512 aa8.49□□□□□ -1.05
CLIP4-202ENST00000401605 ROCK1Q13464 1354 aa8.49□□□□□ -1.05
CLIP4-202ENST00000401605 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
CLIP4-202ENST00000401605 RPRD2Q5VT52 1461 aaKnown RBP8.49□□□□□ -1.05
CLIP4-202ENST00000401605 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
CLIP4-202ENST00000401605 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
CLIP4-202ENST00000401605 HSPA1LP34931 641 aa8.48□□□□□ -1.05
CLIP4-202ENST00000401605 PCGF6Q9BYE7 350 aa8.48□□□□□ -1.05
CLIP4-202ENST00000401605 POLR1AO95602 1720 aaPredicted RBP8.48□□□□□ -1.05
CLIP4-202ENST00000401605 EFCAB6Q5THR3 1501 aa8.47□□□□□ -1.05
CLIP4-202ENST00000401605 STK25O00506 426 aa8.47□□□□□ -1.05
CLIP4-202ENST00000401605 ZMYND10O75800 440 aa8.47□□□□□ -1.05
CLIP4-202ENST00000401605 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
CLIP4-202ENST00000401605 MTMR7Q9Y216 660 aa8.47□□□□□ -1.05
CLIP4-202ENST00000401605 CEP152O94986 1710 aa8.47□□□□□ -1.05
CLIP4-202ENST00000401605 LRRC7Q96NW7 1537 aa8.47□□□□□ -1.05
CLIP4-202ENST00000401605 IQGAP1P46940 1657 aa8.47□□□□□ -1.05
CLIP4-202ENST00000401605 ITGAEP38570 1179 aa8.46□□□□□ -1.05
CLIP4-202ENST00000401605 HDGFP51858 240 aaKnown RBP8.46□□□□□ -1.05
CLIP4-202ENST00000401605 ILDR2Q71H61 639 aa8.46□□□□□ -1.06
CLIP4-202ENST00000401605 UBR1Q8IWV7 1749 aa8.46□□□□□ -1.06
CLIP4-202ENST00000401605 KCNA6P17658 529 aa8.45□□□□□ -1.06
CLIP4-202ENST00000401605 POLA2Q14181 598 aa8.45□□□□□ -1.06
CLIP4-202ENST00000401605 NUP155O75694 1391 aa8.45□□□□□ -1.06
CLIP4-202ENST00000401605 SEMA3EO15041 775 aa8.45□□□□□ -1.06
CLIP4-202ENST00000401605 SLC26A8Q96RN1 970 aa8.45□□□□□ -1.06
CLIP4-202ENST00000401605 PPP1R15AO75807 674 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-202ENST00000401605 FOXD4L5Q5VV16 416 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-202ENST00000401605 FOXD4L4Q8WXT5 416 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-202ENST00000401605 SYNMO15061 1565 aa8.44□□□□□ -1.06
CLIP4-202ENST00000401605 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLIP4-202ENST00000401605 PIK3C2BO00750 1634 aa8.43□□□□□ -1.06
CLIP4-202ENST00000401605 ADGRB3O60242 1522 aa8.43□□□□□ -1.06
CLIP4-202ENST00000401605 SOCS7O14512 581 aa8.43□□□□□ -1.06
CLIP4-202ENST00000401605 WDR70Q9NW82 654 aa8.43□□□□□ -1.06
CLIP4-202ENST00000401605 TMEM94Q12767 1356 aa8.43□□□□□ -1.06
CLIP4-202ENST00000401605 PLEKHG1Q9ULL1 1385 aa8.42□□□□□ -1.06
CLIP4-202ENST00000401605 ZFYVE9O95405 1425 aa8.42□□□□□ -1.06
CLIP4-202ENST00000401605 PROSER2Q86WR7 435 aaPredicted RBP8.42□□□□□ -1.06
CLIP4-202ENST00000401605 AEBP1Q8IUX7 1158 aa8.42□□□□□ -1.06
CLIP4-202ENST00000401605 KDM5AP29375 1690 aaKnown RBP8.42□□□□□ -1.06
CLIP4-202ENST00000401605 RIMS2Q9UQ26 1411 aa8.41□□□□□ -1.06
CLIP4-202ENST00000401605 RIOK3O14730 519 aaKnown RBP8.41□□□□□ -1.06
CLIP4-202ENST00000401605 RBM25P49756 843 aaKnown RBP8.41□□□□□ -1.06
CLIP4-202ENST00000401605 DCAF8L1A6NGE4 600 aa8.41□□□□□ -1.06
CLIP4-202ENST00000401605 KDM4CQ9H3R0 1056 aa8.41□□□□□ -1.06
CLIP4-202ENST00000401605 TBX22Q9Y458 520 aa8.41□□□□□ -1.06
CLIP4-202ENST00000401605 UNC13BO14795 1591 aa8.4□□□□□ -1.06
CLIP4-202ENST00000401605 ALKQ9UM73 1620 aa8.4□□□□□ -1.06
CLIP4-202ENST00000401605 TET3O43151 1660 aa8.4□□□□□ -1.06
CLIP4-202ENST00000401605 RRBP1Q9P2E9 1410 aaKnown RBP8.4□□□□□ -1.06
CLIP4-202ENST00000401605 NKTRP30414 1462 aaKnown RBP8.4□□□□□ -1.07
CLIP4-202ENST00000401605 FAM135BQ49AJ0 1406 aa8.39□□□□□ -1.07
CLIP4-202ENST00000401605 POLR3GLQ9BT43 218 aa8.39□□□□□ -1.07
CLIP4-202ENST00000401605 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
CLIP4-202ENST00000401605 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
CLIP4-202ENST00000401605 MSH6P52701 1360 aa8.38□□□□□ -1.07
CLIP4-202ENST00000401605 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-202ENST00000401605 STRCP1A6NGW2 1772 aa8.37□□□□□ -1.07
CLIP4-202ENST00000401605 PIK3R4Q99570 1358 aa8.37□□□□□ -1.07
CLIP4-202ENST00000401605 IQGAP3Q86VI3 1631 aa8.37□□□□□ -1.07
CLIP4-202ENST00000401605 CFAP65Q6ZU64 1925 aaKnown RBP8.37□□□□□ -1.07
CLIP4-202ENST00000401605 NAIPQ13075 1403 aa8.36□□□□□ -1.07
CLIP4-202ENST00000401605 ADAMTS13Q76LX8 1427 aa8.36□□□□□ -1.07
CLIP4-202ENST00000401605 NCOA3Q9Y6Q9 1424 aa8.36□□□□□ -1.07
CLIP4-202ENST00000401605 TMEM131LA2VDJ0 1609 aa8.36□□□□□ -1.07
CLIP4-202ENST00000401605 SLAIN2Q9P270 581 aa8.36□□□□□ -1.07
CLIP4-202ENST00000401605 NWD1Q149M9 1564 aa8.35□□□□□ -1.07
CLIP4-202ENST00000401605 MED1Q15648 1581 aaPredicted RBP8.35□□□□□ -1.07
CLIP4-202ENST00000401605 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
CLIP4-202ENST00000401605 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
CLIP4-202ENST00000401605 TRAIPQ9BWF2 469 aa8.35□□□□□ -1.07
CLIP4-202ENST00000401605 GCC2Q8IWJ2 1684 aa8.34□□□□□ -1.07
CLIP4-202ENST00000401605 HFM1A2PYH4 1435 aa8.34□□□□□ -1.07
CLIP4-202ENST00000401605 MFAP1P55081 439 aaKnown RBP8.34□□□□□ -1.07
CLIP4-202ENST00000401605 TMCO4Q5TGY1 634 aa8.34□□□□□ -1.07
CLIP4-202ENST00000401605 TRIM52Q96A61 297 aa8.34□□□□□ -1.07
CLIP4-202ENST00000401605 C19orf44Q9H6X5 657 aa8.34□□□□□ -1.07
CLIP4-202ENST00000401605 NAP1L2Q9ULW6 460 aaPredicted RBP8.34□□□□□ -1.07
CLIP4-202ENST00000401605 E9PCH4 1651 aa8.34□□□□□ -1.07
CLIP4-202ENST00000401605 AMOTL2Q9Y2J4 779 aa8.34□□□□□ -1.08
CLIP4-202ENST00000401605 STK24Q9Y6E0 443 aa8.33□□□□□ -1.08
CLIP4-202ENST00000401605 ATF3P18847 181 aa8.32□□□□□ -1.08
CLIP4-202ENST00000401605 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
CLIP4-202ENST00000401605 DIP2AQ14689 1571 aa8.32□□□□□ -1.08
CLIP4-202ENST00000401605 AK7Q96M32 723 aa8.31□□□□□ -1.08
CLIP4-202ENST00000401605 GZF1Q9H116 711 aaPredicted RBP8.31□□□□□ -1.08
CLIP4-202ENST00000401605 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
CLIP4-202ENST00000401605 TRPM2O94759 1503 aa8.3□□□□□ -1.08
CLIP4-202ENST00000401605 VGFO15240 615 aaPredicted RBP8.3□□□□□ -1.08
CLIP4-202ENST00000401605 IPO4Q8TEX9 1081 aaKnown RBP8.3□□□□□ -1.08
CLIP4-202ENST00000401605 FAM117AQ9C073 453 aa8.3□□□□□ -1.08
CLIP4-202ENST00000401605 PTPRUQ92729 1446 aa8.3□□□□□ -1.08
CLIP4-202ENST00000401605 JCADQ9P266 1359 aa8.3□□□□□ -1.08
CLIP4-202ENST00000401605 TRAK2O60296 914 aa8.3□□□□□ -1.08
CLIP4-202ENST00000401605 RPGRIP1LQ68CZ1 1315 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms