RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC01139-201ENST00000400946 ZNF521Q96K83 1311 aa11.52□□□□□ -0.57
LINC01139-201ENST00000400946 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.57
LINC01139-201ENST00000400946 KIF3BO15066 747 aa11.51□□□□□ -0.57
LINC01139-201ENST00000400946 ATXN8OSP0DMR3 200 aa11.51□□□□□ -0.57
LINC01139-201ENST00000400946 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
LINC01139-201ENST00000400946 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.51□□□□□ -0.57
LINC01139-201ENST00000400946 NOP58Q9Y2X3 529 aaKnown RBP11.51□□□□□ -0.57
LINC01139-201ENST00000400946 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
LINC01139-201ENST00000400946 ERVK-7P63135 1459 aa11.51□□□□□ -0.57
LINC01139-201ENST00000400946 EXOC6Q8TAG9 804 aa11.5□□□□□ -0.57
LINC01139-201ENST00000400946 IPO9Q96P70 1041 aaKnown RBP11.5□□□□□ -0.57
LINC01139-201ENST00000400946 ADAMTS8Q9UP79 889 aa11.5□□□□□ -0.57
LINC01139-201ENST00000400946 PPLO60437 1756 aa11.49□□□□□ -0.57
LINC01139-201ENST00000400946 ARHGEF40Q8TER5 1519 aa11.49□□□□□ -0.57
LINC01139-201ENST00000400946 ZBTB22O15209 634 aa11.49□□□□□ -0.57
LINC01139-201ENST00000400946 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
LINC01139-201ENST00000400946 TRMT2AQ8IZ69 625 aaKnown RBP11.49□□□□□ -0.57
LINC01139-201ENST00000400946 HECW2Q9P2P5 1572 aa11.49□□□□□ -0.57
LINC01139-201ENST00000400946 YEATS2Q9ULM3 1422 aa11.48□□□□□ -0.57
LINC01139-201ENST00000400946 POLR3AO14802 1390 aaPredicted RBP11.48□□□□□ -0.57
LINC01139-201ENST00000400946 ZC3H13Q5T200 1668 aaKnown RBP11.48□□□□□ -0.57
LINC01139-201ENST00000400946 MROH2AA6NES4 1674 aa11.47□□□□□ -0.57
LINC01139-201ENST00000400946 NINLQ9Y2I6 1382 aa11.47□□□□□ -0.57
LINC01139-201ENST00000400946 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
LINC01139-201ENST00000400946 DUSP27Q5VZP5 1158 aa11.46□□□□□ -0.57
LINC01139-201ENST00000400946 SLFN5Q08AF3 891 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 C14orf93Q9H972 538 aaKnown RBP11.45□□□□□ -0.58
LINC01139-201ENST00000400946 ARHGAP31Q2M1Z3 1444 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 PIK3C2BO00750 1634 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 AAMPQ13685 434 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 ZFYVE9O95405 1425 aa11.45□□□□□ -0.58
LINC01139-201ENST00000400946 PLEKHH1Q9ULM0 1364 aa11.44□□□□□ -0.58
LINC01139-201ENST00000400946 NKTRP30414 1462 aaKnown RBP11.44□□□□□ -0.58
LINC01139-201ENST00000400946 ADGRB1O14514 1584 aa11.44□□□□□ -0.58
LINC01139-201ENST00000400946 NOS1P29475 1434 aa11.44□□□□□ -0.58
LINC01139-201ENST00000400946 CFAP70Q5T0N1 1121 aa11.44□□□□□ -0.58
LINC01139-201ENST00000400946 CENPQQ7L2Z9 268 aaPredicted RBP11.44□□□□□ -0.58
LINC01139-201ENST00000400946 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
LINC01139-201ENST00000400946 ADAMTSL3P82987 1691 aa11.44□□□□□ -0.58
LINC01139-201ENST00000400946 NSD2O96028 1365 aa11.44□□□□□ -0.58
LINC01139-201ENST00000400946 SIGLEC1Q9BZZ2 1709 aa11.43□□□□□ -0.58
LINC01139-201ENST00000400946 ADGRF5Q8IZF2 1346 aa11.43□□□□□ -0.58
LINC01139-201ENST00000400946 CENPJQ9HC77 1338 aaPredicted RBP11.43□□□□□ -0.58
LINC01139-201ENST00000400946 NPATQ14207 1427 aa11.43□□□□□ -0.58
LINC01139-201ENST00000400946 QRICH2Q9H0J4 1663 aa11.43□□□□□ -0.58
LINC01139-201ENST00000400946 E9PSI1 815 aa11.43□□□□□ -0.58
LINC01139-201ENST00000400946 PDE4AP27815 886 aa11.43□□□□□ -0.58
LINC01139-201ENST00000400946 ABCC3O15438 1527 aa11.43□□□□□ -0.58
LINC01139-201ENST00000400946 CAMSAP1Q5T5Y3 1602 aa11.43□□□□□ -0.58
LINC01139-201ENST00000400946 UGGT1Q9NYU2 1555 aa11.42□□□□□ -0.58
LINC01139-201ENST00000400946 KDM2BQ8NHM5 1336 aa11.42□□□□□ -0.58
LINC01139-201ENST00000400946 CRBNQ96SW2 442 aa11.41□□□□□ -0.58
LINC01139-201ENST00000400946 DIP2CQ9Y2E4 1556 aa11.4□□□□□ -0.58
LINC01139-201ENST00000400946 DDRGK1Q96HY6 314 aa11.4□□□□□ -0.58
LINC01139-201ENST00000400946 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
LINC01139-201ENST00000400946 PDE3AQ14432 1141 aa11.4□□□□□ -0.59
LINC01139-201ENST00000400946 REREQ9P2R6 1566 aa11.39□□□□□ -0.59
LINC01139-201ENST00000400946 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
LINC01139-201ENST00000400946 CARD14Q9BXL6 1004 aa11.39□□□□□ -0.59
LINC01139-201ENST00000400946 USP35Q9P2H5 1018 aa11.39□□□□□ -0.59
LINC01139-201ENST00000400946 SHPRHQ149N8 1683 aa11.38□□□□□ -0.59
LINC01139-201ENST00000400946 CCDC27Q2M243 656 aa11.38□□□□□ -0.59
LINC01139-201ENST00000400946 CGNL1Q0VF96 1302 aa11.38□□□□□ -0.59
LINC01139-201ENST00000400946 PTPRMP28827 1452 aa11.38□□□□□ -0.59
LINC01139-201ENST00000400946 NEXMIFQ5QGS0 1516 aa11.37□□□□□ -0.59
LINC01139-201ENST00000400946 ZMYM3Q14202 1370 aa11.37□□□□□ -0.59
LINC01139-201ENST00000400946 ARHGEF28Q8N1W1 1705 aaKnown RBP11.36□□□□□ -0.59
LINC01139-201ENST00000400946 GABBR2O75899 941 aa11.36□□□□□ -0.59
LINC01139-201ENST00000400946 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
LINC01139-201ENST00000400946 SLC52A1Q9NWF4 448 aa11.36□□□□□ -0.59
LINC01139-201ENST00000400946 APAF1O14727 1248 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 MLECQ14165 292 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 CFAP53Q96M91 514 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 AGLP35573 1532 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 ANKRD36BQ8N2N9 1353 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 MED14O60244 1454 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 IQSEC2Q5JU85 1478 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
LINC01139-201ENST00000400946 PLIN1O60240 522 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 RUNDC1Q96C34 613 aa11.35□□□□□ -0.59
LINC01139-201ENST00000400946 RIMS1Q86UR5 1692 aaKnown RBP11.34□□□□□ -0.59
LINC01139-201ENST00000400946 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
LINC01139-201ENST00000400946 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
LINC01139-201ENST00000400946 MORC1Q86VD1 984 aa11.34□□□□□ -0.59
LINC01139-201ENST00000400946 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
LINC01139-201ENST00000400946 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
LINC01139-201ENST00000400946 FER1L4A9Z1Z3 1794 aa11.32□□□□□ -0.6
LINC01139-201ENST00000400946 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
LINC01139-201ENST00000400946 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
LINC01139-201ENST00000400946 WWC1Q8IX03 1113 aa11.32□□□□□ -0.6
LINC01139-201ENST00000400946 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
LINC01139-201ENST00000400946 ANKRD26Q9UPS8 1709 aa11.31□□□□□ -0.6
LINC01139-201ENST00000400946 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms