RNA–Protein interactions for RNA: ENST00000400940.3

RFKP1-201, Transcript of riboflavin kinase pseudogene 1, humanhuman

BASIC

Gene RFKP1, Length 428 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFKP1-201ENST00000400940 RPGRIP1LQ68CZ1 1315 aa12.55□□□□□ -0.4
RFKP1-201ENST00000400940 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
RFKP1-201ENST00000400940 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
RFKP1-201ENST00000400940 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
RFKP1-201ENST00000400940 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.41
RFKP1-201ENST00000400940 SOS2Q07890 1332 aaPredicted RBP12.52□□□□□ -0.41
RFKP1-201ENST00000400940 MYOM2P54296 1465 aa12.52□□□□□ -0.41
RFKP1-201ENST00000400940 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
RFKP1-201ENST00000400940 RGS12O14924 1447 aa12.51□□□□□ -0.41
RFKP1-201ENST00000400940 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
RFKP1-201ENST00000400940 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
RFKP1-201ENST00000400940 ROBO2Q9HCK4 1378 aa12.5□□□□□ -0.41
RFKP1-201ENST00000400940 SPATA31E1Q6ZUB1 1445 aa12.5□□□□□ -0.41
RFKP1-201ENST00000400940 PXDNQ92626 1479 aa12.5□□□□□ -0.41
RFKP1-201ENST00000400940 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
RFKP1-201ENST00000400940 MEX3CQ5U5Q3 659 aaKnown RBP12.49□□□□□ -0.41
RFKP1-201ENST00000400940 UPF1Q92900 1129 aaKnown RBP eCLIP12.49□□□□□ -0.41
RFKP1-201ENST00000400940 RXRBP28702 533 aa12.48□□□□□ -0.41
RFKP1-201ENST00000400940 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
RFKP1-201ENST00000400940 NWD2Q9ULI1 1742 aa12.48□□□□□ -0.41
RFKP1-201ENST00000400940 NRXN1Q9ULB1 1477 aa12.47□□□□□ -0.41
RFKP1-201ENST00000400940 PIK3C2GO75747 1445 aa12.47□□□□□ -0.41
RFKP1-201ENST00000400940 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
RFKP1-201ENST00000400940 AFF2P51816 1311 aa12.47□□□□□ -0.41
RFKP1-201ENST00000400940 ABCB7O75027 752 aa12.47□□□□□ -0.41
RFKP1-201ENST00000400940 ABCA3Q99758 1704 aa12.47□□□□□ -0.41
RFKP1-201ENST00000400940 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.41
RFKP1-201ENST00000400940 ADGRB2O60241 1585 aa12.46□□□□□ -0.42
RFKP1-201ENST00000400940 ATRNO75882 1429 aa12.45□□□□□ -0.42
RFKP1-201ENST00000400940 CCDC144AA2RUR9 1427 aa12.45□□□□□ -0.42
RFKP1-201ENST00000400940 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
RFKP1-201ENST00000400940 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
RFKP1-201ENST00000400940 NPHP3Q7Z494 1330 aa12.44□□□□□ -0.42
RFKP1-201ENST00000400940 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
RFKP1-201ENST00000400940 LRPPRCP42704 1394 aaKnown RBP12.43□□□□□ -0.42
RFKP1-201ENST00000400940 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
RFKP1-201ENST00000400940 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
RFKP1-201ENST00000400940 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
RFKP1-201ENST00000400940 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
RFKP1-201ENST00000400940 ITGAEP38570 1179 aa12.41□□□□□ -0.42
RFKP1-201ENST00000400940 SLIT2O94813 1529 aa12.41□□□□□ -0.42
RFKP1-201ENST00000400940 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.42
RFKP1-201ENST00000400940 SIRT1Q96EB6 747 aa12.4□□□□□ -0.42
RFKP1-201ENST00000400940 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
RFKP1-201ENST00000400940 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
RFKP1-201ENST00000400940 PLCH1Q4KWH8 1693 aa12.4□□□□□ -0.42
RFKP1-201ENST00000400940 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
RFKP1-201ENST00000400940 BRWD3Q6RI45 1802 aa12.39□□□□□ -0.43
RFKP1-201ENST00000400940 GLI3P10071 1580 aa12.39□□□□□ -0.43
RFKP1-201ENST00000400940 YTHDC2Q9H6S0 1430 aaKnown RBP12.38□□□□□ -0.43
RFKP1-201ENST00000400940 TRPM3Q9HCF6 1732 aaPredicted RBP12.38□□□□□ -0.43
RFKP1-201ENST00000400940 CRYBG1Q9Y4K1 1723 aa12.38□□□□□ -0.43
RFKP1-201ENST00000400940 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
RFKP1-201ENST00000400940 TRPC5Q9UL62 973 aaPredicted RBP12.38□□□□□ -0.43
RFKP1-201ENST00000400940 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
RFKP1-201ENST00000400940 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
RFKP1-201ENST00000400940 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
RFKP1-201ENST00000400940 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
RFKP1-201ENST00000400940 ORAI2Q96SN7 254 aa12.37□□□□□ -0.43
RFKP1-201ENST00000400940 QTRT2Q9H974 415 aaKnown RBP12.37□□□□□ -0.43
RFKP1-201ENST00000400940 ALS2Q96Q42 1657 aa12.37□□□□□ -0.43
RFKP1-201ENST00000400940 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
RFKP1-201ENST00000400940 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
RFKP1-201ENST00000400940 ADGRB1O14514 1584 aa12.36□□□□□ -0.43
RFKP1-201ENST00000400940 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
RFKP1-201ENST00000400940 DDX17Q92841 729 aaKnown RBP12.35□□□□□ -0.43
RFKP1-201ENST00000400940 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
RFKP1-201ENST00000400940 ADGRF5Q8IZF2 1346 aa12.35□□□□□ -0.43
RFKP1-201ENST00000400940 USP21Q9UK80 565 aa12.34□□□□□ -0.43
RFKP1-201ENST00000400940 LRP5O75197 1615 aa12.33□□□□□ -0.43
RFKP1-201ENST00000400940 SBNO1A3KN83 1393 aa12.33□□□□□ -0.44
RFKP1-201ENST00000400940 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
RFKP1-201ENST00000400940 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
RFKP1-201ENST00000400940 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
RFKP1-201ENST00000400940 ARHGEF28Q8N1W1 1705 aaKnown RBP12.31□□□□□ -0.44
RFKP1-201ENST00000400940 KIAA1210Q9ULL0 1709 aa12.31□□□□□ -0.44
RFKP1-201ENST00000400940 COL14A1Q05707 1796 aaKnown RBP12.31□□□□□ -0.44
RFKP1-201ENST00000400940 C14orf93Q9H972 538 aaKnown RBP12.31□□□□□ -0.44
RFKP1-201ENST00000400940 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
RFKP1-201ENST00000400940 EIF3AQ14152 1382 aaKnown RBP12.3□□□□□ -0.44
RFKP1-201ENST00000400940 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
RFKP1-201ENST00000400940 ESCO1Q5FWF5 840 aa12.3□□□□□ -0.44
RFKP1-201ENST00000400940 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
RFKP1-201ENST00000400940 MPHOSPH9Q99550 1183 aa12.3□□□□□ -0.44
RFKP1-201ENST00000400940 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
RFKP1-201ENST00000400940 PLEKHH1Q9ULM0 1364 aa12.3□□□□□ -0.44
RFKP1-201ENST00000400940 BLMP54132 1417 aaPredicted RBP12.29□□□□□ -0.44
RFKP1-201ENST00000400940 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
RFKP1-201ENST00000400940 RGPD1P0DJD0 1748 aa12.29□□□□□ -0.44
RFKP1-201ENST00000400940 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
RFKP1-201ENST00000400940 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
RFKP1-201ENST00000400940 THSD7AQ9UPZ6 1657 aa12.28□□□□□ -0.44
RFKP1-201ENST00000400940 DHX57Q6P158 1386 aaKnown RBP12.28□□□□□ -0.44
RFKP1-201ENST00000400940 FOXO3O43524 673 aa12.27□□□□□ -0.45
RFKP1-201ENST00000400940 ONECUT3O60422 494 aaPredicted RBP12.26□□□□□ -0.45
RFKP1-201ENST00000400940 UNC5CLQ8IV45 518 aa12.26□□□□□ -0.45
RFKP1-201ENST00000400940 PHRF1Q9P1Y6 1649 aaKnown RBP12.26□□□□□ -0.45
RFKP1-201ENST00000400940 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
RFKP1-201ENST00000400940 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
RFKP1-201ENST00000400940 DISP2A7MBM2 1401 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms