RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 IL27Q8NEV9 243 aa10.16□□□□□ -0.78
SAMSN1-202ENST00000400564 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
SAMSN1-202ENST00000400564 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
SAMSN1-202ENST00000400564 SPSB2Q99619 263 aa10.15□□□□□ -0.78
SAMSN1-202ENST00000400564 ADH1BP00325 375 aa10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 RSBN1LQ6PCB5 846 aaPredicted RBP10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 LIMD1Q9UGP4 676 aa10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 FMNL1O95466 1100 aaPredicted RBP10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 DIXDC1Q155Q3 683 aa10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 ZNF775Q96BV0 537 aaPredicted RBP10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 PCDHB15Q9Y5E8 787 aa10.14□□□□□ -0.79
SAMSN1-202ENST00000400564 GGCXP38435 758 aa10.13□□□□□ -0.79
SAMSN1-202ENST00000400564 CSPP1Q1MSJ5 1256 aa10.13□□□□□ -0.79
SAMSN1-202ENST00000400564 FAM160A2Q8N612 972 aaPredicted RBP10.13□□□□□ -0.79
SAMSN1-202ENST00000400564 PRDM9Q9NQV7 894 aa10.13□□□□□ -0.79
SAMSN1-202ENST00000400564 POLR3EQ9NVU0 708 aa10.13□□□□□ -0.79
SAMSN1-202ENST00000400564 SPTLC1O15269 473 aa10.12□□□□□ -0.79
SAMSN1-202ENST00000400564 S1PR4O95977 384 aa10.12□□□□□ -0.79
SAMSN1-202ENST00000400564 Q3C1V9 767 aa10.12□□□□□ -0.79
SAMSN1-202ENST00000400564 SALL2Q9Y467 1007 aaPredicted RBP10.12□□□□□ -0.79
SAMSN1-202ENST00000400564 C6orf229H3BNL8 230 aa10.1□□□□□ -0.79
SAMSN1-202ENST00000400564 PPEF1O14829 653 aaPredicted RBP10.1□□□□□ -0.79
SAMSN1-202ENST00000400564 SLC6A16Q9GZN6 736 aa10.1□□□□□ -0.79
SAMSN1-202ENST00000400564 CLK2P49760 499 aaKnown RBP10.09□□□□□ -0.79
SAMSN1-202ENST00000400564 RSPH6AQ9H0K4 717 aa10.09□□□□□ -0.79
SAMSN1-202ENST00000400564 QPCTQ16769 361 aa10.08□□□□□ -0.8
SAMSN1-202ENST00000400564 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
SAMSN1-202ENST00000400564 CABLES1Q8TDN4 633 aa10.08□□□□□ -0.8
SAMSN1-202ENST00000400564 USB1Q9BQ65 265 aaKnown RBP10.08□□□□□ -0.8
SAMSN1-202ENST00000400564 GJA5P36382 358 aa10.07□□□□□ -0.8
SAMSN1-202ENST00000400564 PROCA1Q8NCQ7 364 aaPredicted RBP10.07□□□□□ -0.8
SAMSN1-202ENST00000400564 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
SAMSN1-202ENST00000400564 HRCP23327 699 aa10.06□□□□□ -0.8
SAMSN1-202ENST00000400564 MTMR2Q13614 643 aa10.06□□□□□ -0.8
SAMSN1-202ENST00000400564 SKIV2LQ15477 1246 aaKnown RBP10.06□□□□□ -0.8
SAMSN1-202ENST00000400564 MSS51Q4VC12 460 aa10.05□□□□□ -0.8
SAMSN1-202ENST00000400564 FBXO31Q5XUX0 539 aaPredicted RBP10.05□□□□□ -0.8
SAMSN1-202ENST00000400564 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
SAMSN1-202ENST00000400564 ZBTB3Q9H5J0 574 aa10.03□□□□□ -0.8
SAMSN1-202ENST00000400564 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
SAMSN1-202ENST00000400564 LILRB3O75022 631 aa10.02□□□□□ -0.8
SAMSN1-202ENST00000400564 TUSC1Q2TAM9 212 aa10.02□□□□□ -0.8
SAMSN1-202ENST00000400564 PRR7Q8TB68 274 aa10.02□□□□□ -0.8
SAMSN1-202ENST00000400564 CFAP99D6REC4 459 aa10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 PKDCCQ504Y2 493 aa10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 RTL5Q5HYW3 569 aaPredicted RBP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 PRPF38BQ5VTL8 546 aaKnown RBP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 DXOO77932 396 aaKnown RBP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 MMP16P51512 607 aa10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 PLA2G2CQ5R387 149 aa10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 NUTM2DQ5VT03 806 aaPredicted RBP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 NUTM2AQ8IVF1 878 aaPredicted RBP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 FCF1Q9Y324 198 aaKnown RBP10.01□□□□□ -0.81
SAMSN1-202ENST00000400564 JUNDP17535 347 aa10□□□□□ -0.81
SAMSN1-202ENST00000400564 ANKLE1Q8NAG6 615 aa10□□□□□ -0.81
SAMSN1-202ENST00000400564 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
SAMSN1-202ENST00000400564 EMID1Q96A84 441 aaPredicted RBP9.99□□□□□ -0.81
SAMSN1-202ENST00000400564 TSC1Q92574 1164 aa9.98□□□□□ -0.81
SAMSN1-202ENST00000400564 PCMTD1Q96MG8 357 aaPredicted RBP9.98□□□□□ -0.81
SAMSN1-202ENST00000400564 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
SAMSN1-202ENST00000400564 DGAT1O75907 488 aa9.97□□□□□ -0.81
SAMSN1-202ENST00000400564 CCDC24Q8N4L8 307 aa9.95□□□□□ -0.82
SAMSN1-202ENST00000400564 PER1O15534 1290 aaPredicted RBP9.94□□□□□ -0.82
SAMSN1-202ENST00000400564 LIAT1Q6ZQX7 453 aa9.94□□□□□ -0.82
SAMSN1-202ENST00000400564 SLC19A1P41440 591 aa9.93□□□□□ -0.82
SAMSN1-202ENST00000400564 MYT1Q01538 1121 aa9.93□□□□□ -0.82
SAMSN1-202ENST00000400564 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
SAMSN1-202ENST00000400564 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
SAMSN1-202ENST00000400564 DESI1Q6ICB0 168 aa9.92□□□□□ -0.82
SAMSN1-202ENST00000400564 RFC5P40937 340 aa9.91□□□□□ -0.82
SAMSN1-202ENST00000400564 PTPRNQ16849 979 aa9.91□□□□□ -0.82
SAMSN1-202ENST00000400564 TRIM67Q6ZTA4 783 aa9.91□□□□□ -0.82
SAMSN1-202ENST00000400564 CCNYL3P0C7X3 344 aa9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 PRR20EP86478 221 aa9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 PRR20CP86479 221 aa9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 PRR20DP86480 221 aa9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 PRR20BP86481 221 aa9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 PRR20AP86496 221 aa9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 CTDSPL2Q05D32 466 aa9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 PTCRAQ6ISU1 281 aaPredicted RBP9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 LYPD8Q6UX82 237 aa9.9□□□□□ -0.82
SAMSN1-202ENST00000400564 FAM187AA6NFU0 413 aa9.88□□□□□ -0.83
SAMSN1-202ENST00000400564 AP1G2O75843 785 aa9.88□□□□□ -0.83
SAMSN1-202ENST00000400564 HELBQ8NG08 1087 aaPredicted RBP9.88□□□□□ -0.83
SAMSN1-202ENST00000400564 TREML4Q6UXN2 200 aa9.88□□□□□ -0.83
SAMSN1-202ENST00000400564 ZNF598Q86UK7 904 aaKnown RBP9.88□□□□□ -0.83
SAMSN1-202ENST00000400564 MAP10Q9P2G4 905 aa9.88□□□□□ -0.83
SAMSN1-202ENST00000400564 SPRYD7Q5W111 196 aa9.87□□□□□ -0.83
SAMSN1-202ENST00000400564 LRRN4Q8WUT4 740 aa9.87□□□□□ -0.83
SAMSN1-202ENST00000400564 EVA1BQ9NVM1 165 aa9.87□□□□□ -0.83
SAMSN1-202ENST00000400564 ZBTB24O43167 697 aaPredicted RBP9.86□□□□□ -0.83
SAMSN1-202ENST00000400564 F12P00748 615 aaPredicted RBP9.86□□□□□ -0.83
SAMSN1-202ENST00000400564 CTHP32929 405 aa9.86□□□□□ -0.83
SAMSN1-202ENST00000400564 POTECB2RU33 542 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms