RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 PLIN1O60240 522 aa16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 XBP1P17861 261 aa16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 DZIP1LQ8IYY4 767 aaKnown RBP16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 CAGE1Q8TC20 777 aa16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 TRAK1Q9UPV9 953 aa16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 CCP110O43303 1012 aa16.17■□□□□ 0.18
LDLRAD4-203ENST00000399848 CCDC66A2RUB6 948 aa16.16■□□□□ 0.18
LDLRAD4-203ENST00000399848 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
LDLRAD4-203ENST00000399848 RALYLQ86SE5 291 aaKnown RBP16.16■□□□□ 0.18
LDLRAD4-203ENST00000399848 WWC2Q6AWC2 1192 aa16.16■□□□□ 0.18
LDLRAD4-203ENST00000399848 OFD1O75665 1012 aa16.16■□□□□ 0.18
LDLRAD4-203ENST00000399848 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
LDLRAD4-203ENST00000399848 HSP90AB2PQ58FF8 381 aa16.15■□□□□ 0.18
LDLRAD4-203ENST00000399848 EXOC6Q8TAG9 804 aa16.15■□□□□ 0.18
LDLRAD4-203ENST00000399848 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
LDLRAD4-203ENST00000399848 R3HCC1Q9Y3T6 440 aaKnown RBP16.14■□□□□ 0.17
LDLRAD4-203ENST00000399848 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.173e-6■■■■□ 20.5
LDLRAD4-203ENST00000399848 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
LDLRAD4-203ENST00000399848 PSMA5P28066 241 aa16.13■□□□□ 0.17
LDLRAD4-203ENST00000399848 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
LDLRAD4-203ENST00000399848 MRE11P49959 708 aa16.13■□□□□ 0.17
LDLRAD4-203ENST00000399848 CCDC88BA6NC98 1476 aa16.12■□□□□ 0.17
LDLRAD4-203ENST00000399848 ZRSR2Q15696 482 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-203ENST00000399848 PRKRIP1Q9H875 184 aaPredicted RBP16.12■□□□□ 0.17
LDLRAD4-203ENST00000399848 C22orf23Q9BZE7 217 aa16.12■□□□□ 0.17
LDLRAD4-203ENST00000399848 EIF2S2P20042 333 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-203ENST00000399848 DHX8Q14562 1220 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-203ENST00000399848 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
LDLRAD4-203ENST00000399848 SMARCE1Q969G3 411 aa16.11■□□□□ 0.17
LDLRAD4-203ENST00000399848 FBXW7Q969H0 707 aa16.11■□□□□ 0.17
LDLRAD4-203ENST00000399848 NUTM2DQ5VT03 806 aaPredicted RBP16.11■□□□□ 0.17
LDLRAD4-203ENST00000399848 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
LDLRAD4-203ENST00000399848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.11■□□□□ 0.17
LDLRAD4-203ENST00000399848 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
LDLRAD4-203ENST00000399848 NUTM2FA1L443 756 aa16.1■□□□□ 0.17
LDLRAD4-203ENST00000399848 FKBP5Q13451 457 aaPredicted RBP16.1■□□□□ 0.17
LDLRAD4-203ENST00000399848 PDCP20941 246 aa16.1■□□□□ 0.17
LDLRAD4-203ENST00000399848 WIZO95785 1651 aa16.1■□□□□ 0.17
LDLRAD4-203ENST00000399848 ZFYVE27Q5T4F4 411 aa16.1■□□□□ 0.17
LDLRAD4-203ENST00000399848 PDILTQ8N807 584 aa16.1■□□□□ 0.17
LDLRAD4-203ENST00000399848 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
LDLRAD4-203ENST00000399848 KINO60870 393 aaKnown RBP16.09■□□□□ 0.17
LDLRAD4-203ENST00000399848 MBD3O95983 291 aa16.09■□□□□ 0.17
LDLRAD4-203ENST00000399848 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
LDLRAD4-203ENST00000399848 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
LDLRAD4-203ENST00000399848 RIPK4P57078 832 aa16.09■□□□□ 0.17
LDLRAD4-203ENST00000399848 PSME1Q06323 249 aa16.09■□□□□ 0.17
LDLRAD4-203ENST00000399848 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
LDLRAD4-203ENST00000399848 RUNDC1Q96C34 613 aa16.08■□□□□ 0.16
LDLRAD4-203ENST00000399848 MCM2P49736 904 aa16.08■□□□□ 0.16
LDLRAD4-203ENST00000399848 SART3Q15020 963 aaKnown RBP16.07■□□□□ 0.16
LDLRAD4-203ENST00000399848 MAP3K9P80192 1104 aa16.07■□□□□ 0.16
LDLRAD4-203ENST00000399848 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
LDLRAD4-203ENST00000399848 FILIP1LQ4L180 1135 aa16.07■□□□□ 0.16
LDLRAD4-203ENST00000399848 CNTROBQ8N137 903 aa16.07■□□□□ 0.16
LDLRAD4-203ENST00000399848 ERLIN2O94905 339 aa16.07■□□□□ 0.16
LDLRAD4-203ENST00000399848 TXLNAP40222 546 aa16.07■□□□□ 0.16
LDLRAD4-203ENST00000399848 APAF1O14727 1248 aa16.06■□□□□ 0.16
LDLRAD4-203ENST00000399848 TRIM5Q9C035 493 aa16.06■□□□□ 0.16
LDLRAD4-203ENST00000399848 GNAI1P63096 354 aa16.06■□□□□ 0.16
LDLRAD4-203ENST00000399848 GOLGA6L10A6NI86 522 aa16.06■□□□□ 0.16
LDLRAD4-203ENST00000399848 CDC45O75419 566 aa16.06■□□□□ 0.16
LDLRAD4-203ENST00000399848 CUX1P39880 1505 aa16.06■□□□□ 0.16
LDLRAD4-203ENST00000399848 PIP4K2AP48426 406 aaPredicted RBP16.06■□□□□ 0.16
LDLRAD4-203ENST00000399848 FHOD3Q2V2M9 1422 aa16.05■□□□□ 0.16
LDLRAD4-203ENST00000399848 MAGEC2Q9UBF1 373 aaPredicted RBP16.05■□□□□ 0.16
LDLRAD4-203ENST00000399848 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
LDLRAD4-203ENST00000399848 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
LDLRAD4-203ENST00000399848 TXLNBQ8N3L3 684 aa16.04■□□□□ 0.16
LDLRAD4-203ENST00000399848 HIP1O00291 1037 aa16.04■□□□□ 0.16
LDLRAD4-203ENST00000399848 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
LDLRAD4-203ENST00000399848 FOSBP53539 338 aa16.03■□□□□ 0.16
LDLRAD4-203ENST00000399848 GOLGA6L7A0A1B0GV03 622 aa16.03■□□□□ 0.16
LDLRAD4-203ENST00000399848 LNPKQ9C0E8 428 aa16.03■□□□□ 0.16
LDLRAD4-203ENST00000399848 SYCP1Q15431 976 aa16.03■□□□□ 0.16
LDLRAD4-203ENST00000399848 SMC2O95347 1197 aa16.03■□□□□ 0.16
LDLRAD4-203ENST00000399848 NFKBIBQ15653 356 aa16.03■□□□□ 0.16
LDLRAD4-203ENST00000399848 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
LDLRAD4-203ENST00000399848 TSPY26PQ9H489 355 aa16.02■□□□□ 0.16
LDLRAD4-203ENST00000399848 AXDND1Q5T1B0 1012 aaPredicted RBP16.02■□□□□ 0.15
LDLRAD4-203ENST00000399848 TSPYL4Q9UJ04 414 aa16.02■□□□□ 0.15
LDLRAD4-203ENST00000399848 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.15
LDLRAD4-203ENST00000399848 ZNHIT6Q9NWK9 470 aaKnown RBP16.02■□□□□ 0.15
LDLRAD4-203ENST00000399848 TSPYL1Q9H0U9 437 aa16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 WASHC4Q2M389 1173 aa16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 ZNF396Q96N95 335 aaPredicted RBP16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 SLC3A2P08195 630 aaKnown RBP16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 CT47B1P0C2W7 299 aaPredicted RBP16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 TTLL5Q6EMB2 1281 aa16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 UBTFL1P0CB47 393 aaPredicted RBP16.01■□□□□ 0.15
LDLRAD4-203ENST00000399848 PIP4K2BP78356 416 aa16■□□□□ 0.15
LDLRAD4-203ENST00000399848 JMYQ8N9B5 988 aa16■□□□□ 0.15
LDLRAD4-203ENST00000399848 KIAA0754O94854 1291 aa16■□□□□ 0.15
LDLRAD4-203ENST00000399848 RIC3Q7Z5B4 369 aa16■□□□□ 0.15
LDLRAD4-203ENST00000399848 CAVIN1Q6NZI2 390 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms