RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 NOM1Q5C9Z4 860 aaKnown RBP8.23□□□□□ -1.09
TRAPPC13-202ENST00000399438 DNAJC14Q6Y2X3 702 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC13-202ENST00000399438 CYB5RLQ6IPT4 315 aa8.23□□□□□ -1.09
TRAPPC13-202ENST00000399438 KCNG1Q9UIX4 513 aa8.23□□□□□ -1.09
TRAPPC13-202ENST00000399438 U3KPZ7 1027 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC13-202ENST00000399438 CCDC184Q52MB2 194 aa8.22□□□□□ -1.09
TRAPPC13-202ENST00000399438 PCMTD1Q96MG8 357 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-202ENST00000399438 ANP32CO43423 234 aa8.22□□□□□ -1.09
TRAPPC13-202ENST00000399438 ZC3H6P61129 1189 aaKnown RBP8.22□□□□□ -1.09
TRAPPC13-202ENST00000399438 WWC1Q8IX03 1113 aa8.22□□□□□ -1.09
TRAPPC13-202ENST00000399438 FAM9BQ8IZU0 186 aa8.22□□□□□ -1.09
TRAPPC13-202ENST00000399438 KLHL42Q9P2K6 505 aa8.22□□□□□ -1.09
TRAPPC13-202ENST00000399438 PEX14O75381 377 aa8.21□□□□□ -1.09
TRAPPC13-202ENST00000399438 HSPA5P11021 654 aaKnown RBP8.21□□□□□ -1.09
TRAPPC13-202ENST00000399438 MLLT3P42568 568 aaPredicted RBP8.21□□□□□ -1.09
TRAPPC13-202ENST00000399438 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.09
TRAPPC13-202ENST00000399438 PPFIA4O75335 1185 aa8.21□□□□□ -1.1
TRAPPC13-202ENST00000399438 AMHR2Q16671 573 aa8.21□□□□□ -1.1
TRAPPC13-202ENST00000399438 PBXIP1Q96AQ6 731 aa8.21□□□□□ -1.1
TRAPPC13-202ENST00000399438 TROQ12816 1431 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC13-202ENST00000399438 C11orf95C9JLR9 678 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 GPR37O15354 613 aa8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 SRPK2P78362 688 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 NAIPQ13075 1403 aa8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 SUPT6HQ7KZ85 1726 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 DPH6Q7L8W6 267 aa8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 MPHOSPH9Q99550 1183 aa8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 MYOM3Q5VTT5 1437 aa8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 HNRNPUQ00839 825 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 SECISBP2LQ93073 1101 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-202ENST00000399438 OS9Q13438 667 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 GSE1Q14687 1217 aa8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 MORC4Q8TE76 937 aa8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 WDR7Q9Y4E6 1490 aa8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 KIF14Q15058 1648 aa8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 VTI1AQ96AJ9 217 aa8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 SBNO2Q9Y2G9 1366 aa8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 ASXL2Q76L83 1435 aa8.19□□□□□ -1.1
TRAPPC13-202ENST00000399438 NAALADL2Q58DX5 795 aa8.18□□□□□ -1.1
TRAPPC13-202ENST00000399438 PARNO95453 639 aaKnown RBP8.18□□□□□ -1.1
TRAPPC13-202ENST00000399438 RPS6KL1Q9Y6S9 549 aa8.18□□□□□ -1.1
TRAPPC13-202ENST00000399438 NBPF8Q3BBV2 869 aa8.17□□□□□ -1.1
TRAPPC13-202ENST00000399438 LARGE2Q8N3Y3 721 aa8.17□□□□□ -1.1
TRAPPC13-202ENST00000399438 DMRT2Q9Y5R5 561 aa8.17□□□□□ -1.1
TRAPPC13-202ENST00000399438 KDM6BO15054 1643 aa8.17□□□□□ -1.1
TRAPPC13-202ENST00000399438 CFDP1Q9UEE9 299 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC13-202ENST00000399438 GNEQ9Y223 722 aaKnown RBP8.17□□□□□ -1.1
TRAPPC13-202ENST00000399438 ABCC10Q5T3U5 1492 aa8.17□□□□□ -1.1
TRAPPC13-202ENST00000399438 SMC5Q8IY18 1101 aa8.16□□□□□ -1.1
TRAPPC13-202ENST00000399438 UBA5Q9GZZ9 404 aa8.16□□□□□ -1.1
TRAPPC13-202ENST00000399438 WASHC2AQ641Q2 1341 aa8.16□□□□□ -1.1
TRAPPC13-202ENST00000399438 OXER1Q8TDS5 423 aa8.16□□□□□ -1.1
TRAPPC13-202ENST00000399438 ZBTB47Q9UFB7 747 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-202ENST00000399438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRAPPC13-202ENST00000399438 CALR3Q96L12 384 aaKnown RBP8.16□□□□□ -1.1
TRAPPC13-202ENST00000399438 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRAPPC13-202ENST00000399438 TTC37Q6PGP7 1564 aa8.15□□□□□ -1.1
TRAPPC13-202ENST00000399438 SF3A1Q15459 793 aaKnown RBP8.15□□□□□ -1.1
TRAPPC13-202ENST00000399438 CCDC181Q5TID7 509 aa8.15□□□□□ -1.1
TRAPPC13-202ENST00000399438 HFM1A2PYH4 1435 aa8.15□□□□□ -1.1
TRAPPC13-202ENST00000399438 ABCA9Q8IUA7 1624 aa8.15□□□□□ -1.1
TRAPPC13-202ENST00000399438 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.11
TRAPPC13-202ENST00000399438 CCDC102AQ96A19 550 aa8.15□□□□□ -1.11
TRAPPC13-202ENST00000399438 ERCC3P19447 782 aa8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 GLI2P10070 1586 aa8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 FOXD4Q12950 439 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 GLMNQ92990 594 aa8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 CDC42BPAQ5VT25 1732 aa8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 ITSN2Q9NZM3 1697 aa8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 CCDC194A0A1B0GVG4 234 aa8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 PSME1Q06323 249 aa8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 METTL14Q9HCE5 456 aaKnown RBP8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 DIP2BQ9P265 1576 aa8.14□□□□□ -1.11
TRAPPC13-202ENST00000399438 MS4A1P11836 297 aa8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 HNRNPMP52272 730 aaKnown RBP eCLIP8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 TBC1D2Q9BYX2 928 aa8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 PREX2Q70Z35 1606 aa8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 PTPN23Q9H3S7 1636 aa8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 TMEM88BA6NKF7 163 aa8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 POM121CA8CG34 1229 aa8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 PMM1Q92871 262 aa8.13□□□□□ -1.11
TRAPPC13-202ENST00000399438 GPATCH8Q9UKJ3 1502 aaKnown RBP8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 SPDYE2BA6NHP3 402 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 SPDYE5A6NIY4 337 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 SPDYE6P0CI01 402 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 RGL3Q3MIN7 710 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 SPDYE2Q495Y8 402 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 VRTNQ9H8Y1 702 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 MAGEC2Q9UBF1 373 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 MYO5CQ9NQX4 1742 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 EIF4G2P78344 907 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 LONRF3Q496Y0 759 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 NAP1L2Q9ULW6 460 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 MAP3K4Q9Y6R4 1608 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 CREB3O43889 395 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 NEFMP07197 916 aa8.12□□□□□ -1.11
TRAPPC13-202ENST00000399438 SH3D19Q5HYK7 790 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms