RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 PRAG1Q86YV5 1406 aa11.37□□□□□ -0.59
SEC24A-202ENST00000398844 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
SEC24A-202ENST00000398844 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
SEC24A-202ENST00000398844 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
SEC24A-202ENST00000398844 SLFN5Q08AF3 891 aa11.36□□□□□ -0.59
SEC24A-202ENST00000398844 TEX14Q8IWB6 1497 aa11.36□□□□□ -0.59
SEC24A-202ENST00000398844 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
SEC24A-202ENST00000398844 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
SEC24A-202ENST00000398844 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
SEC24A-202ENST00000398844 LMOD3Q0VAK6 560 aa11.34□□□□□ -0.59
SEC24A-202ENST00000398844 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
SEC24A-202ENST00000398844 MIS18AQ9NYP9 233 aa11.34□□□□□ -0.59
SEC24A-202ENST00000398844 DCTN1Q14203 1278 aa11.33□□□□□ -0.6
SEC24A-202ENST00000398844 RBM33Q96EV2 1170 aaKnown RBP11.33□□□□□ -0.6
SEC24A-202ENST00000398844 SCAF11Q99590 1463 aaKnown RBP11.33□□□□□ -0.6
SEC24A-202ENST00000398844 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
SEC24A-202ENST00000398844 MCCP23508 829 aa11.33□□□□□ -0.6
SEC24A-202ENST00000398844 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
SEC24A-202ENST00000398844 PLCH2O75038 1416 aa11.32□□□□□ -0.6
SEC24A-202ENST00000398844 KDM5BQ9UGL1 1544 aa11.32□□□□□ -0.6
SEC24A-202ENST00000398844 FGD1P98174 961 aa11.32□□□□□ -0.6
SEC24A-202ENST00000398844 CFAP65Q6ZU64 1925 aaKnown RBP11.32□□□□□ -0.6
SEC24A-202ENST00000398844 NFKBIBQ15653 356 aa11.32□□□□□ -0.6
SEC24A-202ENST00000398844 SLC26A8Q96RN1 970 aa11.32□□□□□ -0.6
SEC24A-202ENST00000398844 GSE1Q14687 1217 aa11.31□□□□□ -0.6
SEC24A-202ENST00000398844 ASXL2Q76L83 1435 aa11.31□□□□□ -0.6
SEC24A-202ENST00000398844 DNTTIP2Q5QJE6 756 aaKnown RBP11.31□□□□□ -0.6
SEC24A-202ENST00000398844 GPRASP1Q5JY77 1395 aa11.31□□□□□ -0.6
SEC24A-202ENST00000398844 ARID3AQ99856 593 aa11.31□□□□□ -0.6
SEC24A-202ENST00000398844 A2MP01023 1474 aa11.3□□□□□ -0.6
SEC24A-202ENST00000398844 TNNQ9UQP3 1299 aa11.3□□□□□ -0.6
SEC24A-202ENST00000398844 DUSP27Q5VZP5 1158 aa11.3□□□□□ -0.6
SEC24A-202ENST00000398844 RTEL1-TNFRSF6BF6WH68 1400 aa11.3□□□□□ -0.6
SEC24A-202ENST00000398844 GOLGA6L3A6NEY3 463 aa11.3□□□□□ -0.6
SEC24A-202ENST00000398844 PSME1Q06323 249 aa11.3□□□□□ -0.6
SEC24A-202ENST00000398844 MAST1Q9Y2H9 1570 aa11.3□□□□□ -0.6
SEC24A-202ENST00000398844 CHD1O14646 1710 aa11.3□□□□□ -0.6
SEC24A-202ENST00000398844 XPCQ01831 940 aaPredicted RBP11.29□□□□□ -0.6
SEC24A-202ENST00000398844 L1TD1Q5T7N2 865 aaKnown RBP11.29□□□□□ -0.6
SEC24A-202ENST00000398844 SULT6B1Q6IMI4 303 aa11.29□□□□□ -0.6
SEC24A-202ENST00000398844 SAMD9LQ8IVG5 1584 aa11.29□□□□□ -0.6
SEC24A-202ENST00000398844 NME9Q86XW9 330 aa11.29□□□□□ -0.6
SEC24A-202ENST00000398844 C22orf23Q9BZE7 217 aa11.29□□□□□ -0.6
SEC24A-202ENST00000398844 IGHDP01880 384 aa11.29□□□□□ -0.6
SEC24A-202ENST00000398844 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.29□□□□□ -0.6
SEC24A-202ENST00000398844 GBP4Q96PP9 640 aa11.29□□□□□ -0.6
SEC24A-202ENST00000398844 MAP4K4O95819 1239 aaPredicted RBP11.29□□□□□ -0.6
SEC24A-202ENST00000398844 FKBP5Q13451 457 aaPredicted RBP11.28□□□□□ -0.6
SEC24A-202ENST00000398844 IDI1Q13907 227 aa11.28□□□□□ -0.6
SEC24A-202ENST00000398844 ABCC10Q5T3U5 1492 aa11.28□□□□□ -0.6
SEC24A-202ENST00000398844 FRAT2O75474 233 aaPredicted RBP11.28□□□□□ -0.6
SEC24A-202ENST00000398844 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
SEC24A-202ENST00000398844 NKTRP30414 1462 aaKnown RBP11.28□□□□□ -0.6
SEC24A-202ENST00000398844 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
SEC24A-202ENST00000398844 NUP160Q12769 1436 aa11.28□□□□□ -0.6
SEC24A-202ENST00000398844 TWISTNBQ3B726 338 aaPredicted RBP11.28□□□□□ -0.6
SEC24A-202ENST00000398844 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
SEC24A-202ENST00000398844 GNAI1P63096 354 aa11.27□□□□□ -0.6
SEC24A-202ENST00000398844 EMILIN1Q9Y6C2 1016 aa11.27□□□□□ -0.6
SEC24A-202ENST00000398844 AIMP1Q12904 312 aaKnown RBP11.27□□□□□ -0.6
SEC24A-202ENST00000398844 HMMRO75330 724 aa11.27□□□□□ -0.61
SEC24A-202ENST00000398844 TMEM57Q8N5G2 664 aa11.27□□□□□ -0.61
SEC24A-202ENST00000398844 WDR7Q9Y4E6 1490 aa11.27□□□□□ -0.61
SEC24A-202ENST00000398844 TMPOP42166 694 aaKnown RBP11.27□□□□□ -0.61
SEC24A-202ENST00000398844 CEBPAP49715 358 aaPredicted RBP11.27□□□□□ -0.61
SEC24A-202ENST00000398844 C1orf141Q5JVX7 400 aa11.27□□□□□ -0.61
SEC24A-202ENST00000398844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.27□□□□□ -0.61
SEC24A-202ENST00000398844 NLRP6P59044 892 aa11.27□□□□□ -0.61
SEC24A-202ENST00000398844 TESK2Q96S53 571 aa11.27□□□□□ -0.61
SEC24A-202ENST00000398844 ASXL1Q8IXJ9 1541 aa11.27□□□□□ -0.61
SEC24A-202ENST00000398844 EIF2AK4Q9P2K8 1649 aaKnown RBP11.26□□□□□ -0.61
SEC24A-202ENST00000398844 MCM10Q7L590 875 aa11.26□□□□□ -0.61
SEC24A-202ENST00000398844 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
SEC24A-202ENST00000398844 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
SEC24A-202ENST00000398844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.26□□□□□ -0.61
SEC24A-202ENST00000398844 MYO5CQ9NQX4 1742 aa11.26□□□□□ -0.61
SEC24A-202ENST00000398844 KDM5CP41229 1560 aa11.26□□□□□ -0.61
SEC24A-202ENST00000398844 MVPQ14764 893 aaKnown RBP11.26□□□□□ -0.61
SEC24A-202ENST00000398844 ESCO1Q5FWF5 840 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 KIF16BQ96L93 1317 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 PARD3Q8TEW0 1356 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 HSP90B1P14625 803 aaKnown RBP11.25□□□□□ -0.61
SEC24A-202ENST00000398844 USHBP1Q8N6Y0 703 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 NPHP1O15259 732 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 CARD14Q9BXL6 1004 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
SEC24A-202ENST00000398844 RARSP54136 660 aaKnown RBP11.25□□□□□ -0.61
SEC24A-202ENST00000398844 FAM83GA6ND36 823 aa11.24□□□□□ -0.61
SEC24A-202ENST00000398844 PLEKHH1Q9ULM0 1364 aa11.24□□□□□ -0.61
SEC24A-202ENST00000398844 WDR63Q8IWG1 891 aa11.24□□□□□ -0.61
SEC24A-202ENST00000398844 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
SEC24A-202ENST00000398844 SPINK5Q9NQ38 1064 aaPredicted RBP11.24□□□□□ -0.61
SEC24A-202ENST00000398844 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
SEC24A-202ENST00000398844 CDC42BPAQ5VT25 1732 aa11.24□□□□□ -0.61
SEC24A-202ENST00000398844 IL27Q8NEV9 243 aa11.24□□□□□ -0.61
SEC24A-202ENST00000398844 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
SEC24A-202ENST00000398844 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
SEC24A-202ENST00000398844 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms