RNA–Protein interactions for RNA: ENST00000398234.7

PDE9A-212, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-212ENST00000398234 USP47Q96K76 1375 aa29.11■■■□□ 2.25
PDE9A-212ENST00000398234 NCOA3Q9Y6Q9 1424 aa29.11■■■□□ 2.25
PDE9A-212ENST00000398234 ATF3P18847 181 aa29.1■■■□□ 2.25
PDE9A-212ENST00000398234 EIF4G2P78344 907 aaKnown RBP eCLIP29.09■■■□□ 2.25
PDE9A-212ENST00000398234 ARHGEF28Q8N1W1 1705 aaKnown RBP29.08■■■□□ 2.25
PDE9A-212ENST00000398234 ADGRL3Q9HAR2 1447 aa29.06■■■□□ 2.24
PDE9A-212ENST00000398234 NUTM2FA1L443 756 aa29.06■■■□□ 2.24
PDE9A-212ENST00000398234 XIRP1Q702N8 1843 aaKnown RBP29.05■■■□□ 2.24
PDE9A-212ENST00000398234 HSPA5P11021 654 aaKnown RBP29.04■■■□□ 2.24
PDE9A-212ENST00000398234 CADPS2Q86UW7 1296 aa29.04■■■□□ 2.24
PDE9A-212ENST00000398234 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.04■■■□□ 2.24
PDE9A-212ENST00000398234 UBAP1LF5GYI3 381 aa29.03■■■□□ 2.24
PDE9A-212ENST00000398234 TOM1O60784 492 aa29.01■■■□□ 2.23
PDE9A-212ENST00000398234 WASLO00401 505 aaPredicted RBP29■■■□□ 2.23
PDE9A-212ENST00000398234 CDK19Q9BWU1 502 aa28.99■■■□□ 2.23
PDE9A-212ENST00000398234 SLAIN2Q9P270 581 aa28.98■■■□□ 2.23
PDE9A-212ENST00000398234 NALCNQ8IZF0 1738 aa28.98■■■□□ 2.23
PDE9A-212ENST00000398234 PIP4K2BP78356 416 aa28.97■■■□□ 2.23
PDE9A-212ENST00000398234 SRPK2P78362 688 aaKnown RBP28.97■■■□□ 2.23
PDE9A-212ENST00000398234 TESK2Q96S53 571 aa28.97■■■□□ 2.23
PDE9A-212ENST00000398234 SCAF1Q9H7N4 1312 aaKnown RBP28.97■■■□□ 2.23
PDE9A-212ENST00000398234 IQSEC2Q5JU85 1478 aa28.97■■■□□ 2.23
PDE9A-212ENST00000398234 EVC2Q86UK5 1308 aa28.95■■■□□ 2.23
PDE9A-212ENST00000398234 QRICH2Q9H0J4 1663 aa28.95■■■□□ 2.23
PDE9A-212ENST00000398234 CABP2Q9NPB3 220 aa28.95■■■□□ 2.22
PDE9A-212ENST00000398234 DCCP43146 1447 aa28.93■■■□□ 2.22
PDE9A-212ENST00000398234 SLC24A1O60721 1099 aa28.91■■■□□ 2.22
PDE9A-212ENST00000398234 TMF1P82094 1093 aa28.9■■■□□ 2.22
PDE9A-212ENST00000398234 ESCO1Q5FWF5 840 aa28.9■■■□□ 2.22
PDE9A-212ENST00000398234 SBNO2Q9Y2G9 1366 aa28.89■■■□□ 2.21
PDE9A-212ENST00000398234 NUDT16Q96DE0 195 aaKnown RBP28.88■■■□□ 2.21
PDE9A-212ENST00000398234 ORAI2Q96SN7 254 aa28.88■■■□□ 2.21
PDE9A-212ENST00000398234 CDC42BPGQ6DT37 1551 aa28.88■■■□□ 2.21
PDE9A-212ENST00000398234 MST1RQ04912 1400 aa28.86■■■□□ 2.21
PDE9A-212ENST00000398234 ADGRB2O60241 1585 aa28.86■■■□□ 2.21
PDE9A-212ENST00000398234 POLR3GLQ9BT43 218 aa28.85■■■□□ 2.21
PDE9A-212ENST00000398234 PRR36Q9H6K5 1346 aa28.84■■■□□ 2.21
PDE9A-212ENST00000398234 C1orf167Q5SNV9 1468 aa28.84■■■□□ 2.21
PDE9A-212ENST00000398234 TULP4Q9NRJ4 1543 aa28.83■■■□□ 2.21
PDE9A-212ENST00000398234 DISP3Q9P2K9 1392 aa28.83■■■□□ 2.21
PDE9A-212ENST00000398234 PMFBP1Q8TBY8 1022 aa28.82■■■□□ 2.2
PDE9A-212ENST00000398234 BRINP3Q76B58 766 aa28.81■■■□□ 2.2
PDE9A-212ENST00000398234 CCDC61Q9Y6R9 512 aa28.81■■■□□ 2.2
PDE9A-212ENST00000398234 FMN2Q9NZ56 1722 aa28.8■■■□□ 2.2
PDE9A-212ENST00000398234 CDCA8Q53HL2 280 aa28.8■■■□□ 2.2
PDE9A-212ENST00000398234 TMC1Q8TDI8 760 aa28.79■■■□□ 2.2
PDE9A-212ENST00000398234 CABP1Q9NZU7 370 aa28.78■■■□□ 2.2
PDE9A-212ENST00000398234 PHF8Q9UPP1 1060 aa28.78■■■□□ 2.2
PDE9A-212ENST00000398234 C11orf95C9JLR9 678 aaPredicted RBP28.78■■■□□ 2.2
PDE9A-212ENST00000398234 ANKARQ7Z5J8 1434 aa28.77■■■□□ 2.2
PDE9A-212ENST00000398234 FOXO3O43524 673 aa28.76■■■□□ 2.19
PDE9A-212ENST00000398234 DDX17Q92841 729 aaKnown RBP28.76■■■□□ 2.19
PDE9A-212ENST00000398234 FBXO41Q8TF61 875 aa28.75■■■□□ 2.19
PDE9A-212ENST00000398234 NGDNQ8NEJ9 315 aaKnown RBP28.75■■■□□ 2.19
PDE9A-212ENST00000398234 ATP7BP35670 1465 aa28.74■■■□□ 2.19
PDE9A-212ENST00000398234 ATAD2Q6PL18 1390 aa28.73■■■□□ 2.19
PDE9A-212ENST00000398234 PUS7Q96PZ0 661 aaKnown RBP28.73■■■□□ 2.19
PDE9A-212ENST00000398234 RGPD8O14715 1765 aaPredicted RBP28.72■■■□□ 2.19
PDE9A-212ENST00000398234 USP32Q8NFA0 1604 aa28.72■■■□□ 2.19
PDE9A-212ENST00000398234 SLC12A5Q9H2X9 1139 aa28.72■■■□□ 2.19
PDE9A-212ENST00000398234 PPIP5K1Q6PFW1 1433 aa28.72■■■□□ 2.19
PDE9A-212ENST00000398234 XPCQ01831 940 aaPredicted RBP28.7■■■□□ 2.19
PDE9A-212ENST00000398234 PSME1Q06323 249 aa28.7■■■□□ 2.18
PDE9A-212ENST00000398234 PLEKHG3A1L390 1219 aa28.69■■■□□ 2.18
PDE9A-212ENST00000398234 ROBO1Q9Y6N7 1651 aa28.69■■■□□ 2.18
PDE9A-212ENST00000398234 ACEP12821 1306 aa28.69■■■□□ 2.18
PDE9A-212ENST00000398234 KIF7Q2M1P5 1343 aa28.66■■■□□ 2.18
PDE9A-212ENST00000398234 NPHP3Q7Z494 1330 aa28.65■■■□□ 2.18
PDE9A-212ENST00000398234 KRT28Q7Z3Y7 464 aa28.64■■■□□ 2.18
PDE9A-212ENST00000398234 HSPA1LP34931 641 aa28.62■■■□□ 2.17
PDE9A-212ENST00000398234 WASHC2AQ641Q2 1341 aa28.62■■■□□ 2.17
PDE9A-212ENST00000398234 HDGFL2Q7Z4V5 671 aaPredicted RBP28.6■■■□□ 2.17
PDE9A-212ENST00000398234 TERF2IPQ9NYB0 399 aa28.6■■■□□ 2.17
PDE9A-212ENST00000398234 PAK3O75914 559 aaPredicted RBP28.6■■■□□ 2.17
PDE9A-212ENST00000398234 ITSN1Q15811 1721 aa28.59■■■□□ 2.17
PDE9A-212ENST00000398234 ZNF692Q9BU19 519 aaPredicted RBP28.59■■■□□ 2.17
PDE9A-212ENST00000398234 CCDC7Q96M83 1385 aa28.59■■■□□ 2.17
PDE9A-212ENST00000398234 POLR3AO14802 1390 aaPredicted RBP28.57■■■□□ 2.16
PDE9A-212ENST00000398234 LMOD2Q6P5Q4 547 aa28.57■■■□□ 2.16
PDE9A-212ENST00000398234 TOPAZ1Q8N9V7 1692 aa28.57■■■□□ 2.16
PDE9A-212ENST00000398234 KIF1AQ12756 1690 aa28.56■■■□□ 2.16
PDE9A-212ENST00000398234 NINLQ9Y2I6 1382 aa28.56■■■□□ 2.16
PDE9A-212ENST00000398234 SOS2Q07890 1332 aaPredicted RBP28.55■■■□□ 2.16
PDE9A-212ENST00000398234 KTN1Q86UP2 1357 aaKnown RBP28.55■■■□□ 2.16
PDE9A-212ENST00000398234 LRRC59Q96AG4 307 aaKnown RBP28.54■■■□□ 2.16
PDE9A-212ENST00000398234 ZNF316A6NFI3 1004 aaPredicted RBP28.53■■■□□ 2.16
PDE9A-212ENST00000398234 PANK3Q9H999 370 aa28.52■■■□□ 2.16
PDE9A-212ENST00000398234 A0A1W2PP64 1363 aa28.51■■■□□ 2.16
PDE9A-212ENST00000398234 PLEKHG5O94827 1062 aa28.51■■■□□ 2.15
PDE9A-212ENST00000398234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.51■■■□□ 2.15
PDE9A-212ENST00000398234 CPSF1Q10570 1443 aaKnown RBP28.5■■■□□ 2.15
PDE9A-212ENST00000398234 ILDR1Q86SU0 546 aaPredicted RBP28.5■■■□□ 2.15
PDE9A-212ENST00000398234 PHLPP1O60346 1717 aa28.5■■■□□ 2.15
PDE9A-212ENST00000398234 AHDC1Q5TGY3 1603 aaPredicted RBP28.5■■■□□ 2.15
PDE9A-212ENST00000398234 ANKRD36BQ8N2N9 1353 aa28.49■■■□□ 2.15
PDE9A-212ENST00000398234 PXDNQ92626 1479 aa28.49■■■□□ 2.15
PDE9A-212ENST00000398234 CD163L1Q9NR16 1453 aa28.49■■■□□ 2.15
PDE9A-212ENST00000398234 NHSL1Q5SYE7 1610 aa28.48■■■□□ 2.15
PDE9A-212ENST00000398234 USP6P35125 1406 aa28.48■■■□□ 2.15
PDE9A-212ENST00000398234 NUTM2GQ5VZR2 741 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 486.8 ms