RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ARHGEF28Q8N1W1 1705 aaKnown RBP36.18■■■■□ 3.38
TMEM55B-202ENST00000398020 FBXO41Q8TF61 875 aa36.16■■■■□ 3.38
TMEM55B-202ENST00000398020 PIP4K2BP78356 416 aa36.14■■■■□ 3.38
TMEM55B-202ENST00000398020 ATF3P18847 181 aa36.13■■■■□ 3.37
TMEM55B-202ENST00000398020 SCAF1Q9H7N4 1312 aaKnown RBP36.13■■■■□ 3.37
TMEM55B-202ENST00000398020 GPRASP1Q5JY77 1395 aa36.12■■■■□ 3.37
TMEM55B-202ENST00000398020 CARD11Q9BXL7 1154 aa36.12■■■■□ 3.37
TMEM55B-202ENST00000398020 CADPS2Q86UW7 1296 aa36.1■■■■□ 3.37
TMEM55B-202ENST00000398020 DCCP43146 1447 aa36.09■■■■□ 3.37
TMEM55B-202ENST00000398020 MINK1Q8N4C8 1332 aaPredicted RBP36.07■■■■□ 3.36
TMEM55B-202ENST00000398020 SLAIN2Q9P270 581 aa36.07■■■■□ 3.36
TMEM55B-202ENST00000398020 HIRIP3Q9BW71 556 aaPredicted RBP36.06■■■■□ 3.36
TMEM55B-202ENST00000398020 CDC42BPGQ6DT37 1551 aa36.04■■■■□ 3.36
TMEM55B-202ENST00000398020 CENPJQ9HC77 1338 aaPredicted RBP36.01■■■■□ 3.35
TMEM55B-202ENST00000398020 MST1RQ04912 1400 aa36■■■■□ 3.35
TMEM55B-202ENST00000398020 NUTM2FA1L443 756 aa35.99■■■■□ 3.35
TMEM55B-202ENST00000398020 ILDR1Q86SU0 546 aaPredicted RBP35.99■■■■□ 3.35
TMEM55B-202ENST00000398020 QRICH2Q9H0J4 1663 aa35.97■■■■□ 3.35
TMEM55B-202ENST00000398020 EIF3AQ14152 1382 aaKnown RBP35.97■■■■□ 3.35
TMEM55B-202ENST00000398020 ADGRB2O60241 1585 aa35.96■■■■□ 3.35
TMEM55B-202ENST00000398020 ROBO1Q9Y6N7 1651 aa35.95■■■■□ 3.35
TMEM55B-202ENST00000398020 FMN2Q9NZ56 1722 aa35.93■■■■□ 3.34
TMEM55B-202ENST00000398020 C1orf167Q5SNV9 1468 aa35.93■■■■□ 3.34
TMEM55B-202ENST00000398020 WASLO00401 505 aaPredicted RBP35.88■■■■□ 3.33
TMEM55B-202ENST00000398020 BRINP3Q76B58 766 aa35.88■■■■□ 3.33
TMEM55B-202ENST00000398020 ORAI2Q96SN7 254 aa35.87■■■■□ 3.33
TMEM55B-202ENST00000398020 USP47Q96K76 1375 aa35.86■■■■□ 3.33
TMEM55B-202ENST00000398020 RGPD8O14715 1765 aaPredicted RBP35.84■■■■□ 3.33
TMEM55B-202ENST00000398020 ST20-MTHFSA0A0A6YYL1 179 aa35.83■■■■□ 3.33
TMEM55B-202ENST00000398020 ESCO1Q5FWF5 840 aa35.83■■■■□ 3.33
TMEM55B-202ENST00000398020 CDK19Q9BWU1 502 aa35.83■■■■□ 3.33
TMEM55B-202ENST00000398020 USP32Q8NFA0 1604 aa35.81■■■■□ 3.32
TMEM55B-202ENST00000398020 HSPA1LP34931 641 aa35.81■■■■□ 3.32
TMEM55B-202ENST00000398020 TULP4Q9NRJ4 1543 aa35.79■■■■□ 3.32
TMEM55B-202ENST00000398020 PRR36Q9H6K5 1346 aa35.78■■■■□ 3.32
TMEM55B-202ENST00000398020 DDX17Q92841 729 aaKnown RBP35.77■■■■□ 3.32
TMEM55B-202ENST00000398020 SRPK2P78362 688 aaKnown RBP35.76■■■■□ 3.32
TMEM55B-202ENST00000398020 ANKARQ7Z5J8 1434 aa35.76■■■■□ 3.31
TMEM55B-202ENST00000398020 CABP2Q9NPB3 220 aa35.75■■■■□ 3.31
TMEM55B-202ENST00000398020 SBNO2Q9Y2G9 1366 aa35.74■■■■□ 3.31
TMEM55B-202ENST00000398020 EVC2Q86UK5 1308 aa35.74■■■■□ 3.31
TMEM55B-202ENST00000398020 ATP7BP35670 1465 aa35.73■■■■□ 3.31
TMEM55B-202ENST00000398020 NUDT16Q96DE0 195 aaKnown RBP35.72■■■■□ 3.31
TMEM55B-202ENST00000398020 TESK2Q96S53 571 aa35.72■■■■□ 3.31
TMEM55B-202ENST00000398020 PHLPP1O60346 1717 aa35.72■■■■□ 3.31
TMEM55B-202ENST00000398020 PMFBP1Q8TBY8 1022 aa35.69■■■■□ 3.3
TMEM55B-202ENST00000398020 NHSL1Q5SYE7 1610 aa35.69■■■■□ 3.3
TMEM55B-202ENST00000398020 AHDC1Q5TGY3 1603 aaPredicted RBP35.69■■■■□ 3.3
TMEM55B-202ENST00000398020 PHF8Q9UPP1 1060 aa35.68■■■■□ 3.3
TMEM55B-202ENST00000398020 FOXO3O43524 673 aa35.68■■■■□ 3.3
TMEM55B-202ENST00000398020 EIF4G2P78344 907 aaKnown RBP eCLIP35.66■■■■□ 3.3
TMEM55B-202ENST00000398020 KIF1AQ12756 1690 aa35.65■■■■□ 3.3
TMEM55B-202ENST00000398020 HSPA5P11021 654 aaKnown RBP35.65■■■■□ 3.3
TMEM55B-202ENST00000398020 ITSN1Q15811 1721 aa35.64■■■■□ 3.3
TMEM55B-202ENST00000398020 XPCQ01831 940 aaPredicted RBP35.63■■■■□ 3.29
TMEM55B-202ENST00000398020 TOPAZ1Q8N9V7 1692 aa35.63■■■■□ 3.29
TMEM55B-202ENST00000398020 COL16A1Q07092 1604 aaPredicted RBP35.63■■■■□ 3.29
TMEM55B-202ENST00000398020 CCDC61Q9Y6R9 512 aa35.62■■■■□ 3.29
TMEM55B-202ENST00000398020 NPHP3Q7Z494 1330 aa35.6■■■■□ 3.29
TMEM55B-202ENST00000398020 DISP3Q9P2K9 1392 aa35.59■■■■□ 3.29
TMEM55B-202ENST00000398020 PPIP5K1Q6PFW1 1433 aa35.58■■■■□ 3.29
TMEM55B-202ENST00000398020 NGDNQ8NEJ9 315 aaKnown RBP35.56■■■■□ 3.28
TMEM55B-202ENST00000398020 TMF1P82094 1093 aa35.55■■■■□ 3.28
TMEM55B-202ENST00000398020 CABP1Q9NZU7 370 aa35.55■■■■□ 3.28
TMEM55B-202ENST00000398020 SOS2Q07890 1332 aaPredicted RBP35.55■■■■□ 3.28
TMEM55B-202ENST00000398020 PXDNQ92626 1479 aa35.54■■■■□ 3.28
TMEM55B-202ENST00000398020 SLC24A1O60721 1099 aa35.53■■■■□ 3.28
TMEM55B-202ENST00000398020 PSME1Q06323 249 aa35.52■■■■□ 3.28
TMEM55B-202ENST00000398020 ATAD2Q6PL18 1390 aa35.52■■■■□ 3.28
TMEM55B-202ENST00000398020 KRT28Q7Z3Y7 464 aa35.52■■■■□ 3.28
TMEM55B-202ENST00000398020 PLEKHG3A1L390 1219 aa35.51■■■■□ 3.28
TMEM55B-202ENST00000398020 ACEP12821 1306 aa35.5■■■■□ 3.27
TMEM55B-202ENST00000398020 LRRC59Q96AG4 307 aaKnown RBP35.49■■■■□ 3.27
TMEM55B-202ENST00000398020 POLR3AO14802 1390 aaPredicted RBP35.47■■■■□ 3.27
TMEM55B-202ENST00000398020 TMC1Q8TDI8 760 aa35.46■■■■□ 3.27
TMEM55B-202ENST00000398020 JCADQ9P266 1359 aa35.44■■■■□ 3.26
TMEM55B-202ENST00000398020 ZEB1P37275 1124 aaPredicted RBP35.43■■■■□ 3.26
TMEM55B-202ENST00000398020 PUS7Q96PZ0 661 aaKnown RBP35.43■■■■□ 3.26
TMEM55B-202ENST00000398020 SLC12A5Q9H2X9 1139 aa35.42■■■■□ 3.26
TMEM55B-202ENST00000398020 CDCA8Q53HL2 280 aa35.4■■■■□ 3.26
TMEM55B-202ENST00000398020 SHPRHQ149N8 1683 aa35.39■■■■□ 3.26
TMEM55B-202ENST00000398020 TRPM3Q9HCF6 1732 aaPredicted RBP35.39■■■■□ 3.26
TMEM55B-202ENST00000398020 POLR3GLQ9BT43 218 aa35.39■■■■□ 3.26
TMEM55B-202ENST00000398020 SPATA31A3Q5VYP0 1347 aa35.39■■■■□ 3.26
TMEM55B-202ENST00000398020 PNPLA6Q8IY17 1366 aa35.38■■■■□ 3.25
TMEM55B-202ENST00000398020 PAK3O75914 559 aaPredicted RBP35.38■■■■□ 3.25
TMEM55B-202ENST00000398020 LMOD2Q6P5Q4 547 aa35.37■■■■□ 3.25
TMEM55B-202ENST00000398020 TNS3Q68CZ2 1445 aa35.36■■■■□ 3.25
TMEM55B-202ENST00000398020 C11orf95C9JLR9 678 aaPredicted RBP35.36■■■■□ 3.25
TMEM55B-202ENST00000398020 SBNO1A3KN83 1393 aa35.36■■■■□ 3.25
TMEM55B-202ENST00000398020 CD163L1Q9NR16 1453 aa35.33■■■■□ 3.25
TMEM55B-202ENST00000398020 AKAP12Q02952 1782 aa35.33■■■■□ 3.25
TMEM55B-202ENST00000398020 USP6P35125 1406 aa35.33■■■■□ 3.25
TMEM55B-202ENST00000398020 CPSF1Q10570 1443 aaKnown RBP35.32■■■■□ 3.24
TMEM55B-202ENST00000398020 PLEKHG5O94827 1062 aa35.32■■■■□ 3.24
TMEM55B-202ENST00000398020 KTN1Q86UP2 1357 aaKnown RBP35.3■■■■□ 3.24
TMEM55B-202ENST00000398020 ALS2Q96Q42 1657 aa35.29■■■■□ 3.24
TMEM55B-202ENST00000398020 NINLQ9Y2I6 1382 aa35.29■■■■□ 3.24
TMEM55B-202ENST00000398020 NUTM2BA6NNL0 878 aaPredicted RBP35.29■■■■□ 3.24
TMEM55B-202ENST00000398020 NUTM2EB1AL46 878 aaPredicted RBP35.29■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms