RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 UPF1Q92900 1129 aaKnown RBP eCLIP10.22□□□□□ -0.77
SUMO3-202ENST00000397893 LRPPRCP42704 1394 aaKnown RBP10.22□□□□□ -0.77
SUMO3-202ENST00000397893 ABCC11Q96J66 1382 aa10.22□□□□□ -0.77
SUMO3-202ENST00000397893 ANKRD30BQ9BXX2 1392 aa10.22□□□□□ -0.77
SUMO3-202ENST00000397893 LAMC1P11047 1609 aa10.22□□□□□ -0.77
SUMO3-202ENST00000397893 RXRBP28702 533 aa10.21□□□□□ -0.77
SUMO3-202ENST00000397893 CCDC144AA2RUR9 1427 aa10.21□□□□□ -0.78
SUMO3-202ENST00000397893 PPLO60437 1756 aa10.2□□□□□ -0.78
SUMO3-202ENST00000397893 PIK3C2GO75747 1445 aa10.2□□□□□ -0.78
SUMO3-202ENST00000397893 WAPLQ7Z5K2 1190 aa10.2□□□□□ -0.78
SUMO3-202ENST00000397893 CDK12Q9NYV4 1490 aaPredicted RBP10.2□□□□□ -0.78
SUMO3-202ENST00000397893 PLEKHH1Q9ULM0 1364 aa10.2□□□□□ -0.78
SUMO3-202ENST00000397893 TMEM132EQ6IEE7 984 aa10.19□□□□□ -0.78
SUMO3-202ENST00000397893 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
SUMO3-202ENST00000397893 C14orf93Q9H972 538 aaKnown RBP10.19□□□□□ -0.78
SUMO3-202ENST00000397893 FNBP4Q8N3X1 1017 aaPredicted RBP10.18□□□□□ -0.78
SUMO3-202ENST00000397893 C8orf37Q96NL8 207 aa10.18□□□□□ -0.78
SUMO3-202ENST00000397893 QTRT2Q9H974 415 aaKnown RBP10.18□□□□□ -0.78
SUMO3-202ENST00000397893 STK26Q9P289 416 aa10.18□□□□□ -0.78
SUMO3-202ENST00000397893 NRXN1Q9ULB1 1477 aa10.17□□□□□ -0.78
SUMO3-202ENST00000397893 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
SUMO3-202ENST00000397893 RBM6P78332 1123 aaKnown RBP10.17□□□□□ -0.78
SUMO3-202ENST00000397893 CDC42BPGQ6DT37 1551 aa10.17□□□□□ -0.78
SUMO3-202ENST00000397893 MYOM2P54296 1465 aa10.17□□□□□ -0.78
SUMO3-202ENST00000397893 PXDNQ92626 1479 aa10.17□□□□□ -0.78
SUMO3-202ENST00000397893 YTHDC2Q9H6S0 1430 aaKnown RBP10.16□□□□□ -0.78
SUMO3-202ENST00000397893 NPHP3Q7Z494 1330 aa10.16□□□□□ -0.78
SUMO3-202ENST00000397893 ACIN1Q9UKV3 1341 aaKnown RBP10.16□□□□□ -0.78
SUMO3-202ENST00000397893 FOXO3O43524 673 aa10.16□□□□□ -0.78
SUMO3-202ENST00000397893 NPM3O75607 178 aaKnown RBP10.16□□□□□ -0.78
SUMO3-202ENST00000397893 ESCO1Q5FWF5 840 aa10.16□□□□□ -0.78
SUMO3-202ENST00000397893 NGLY1Q96IV0 654 aa10.16□□□□□ -0.78
SUMO3-202ENST00000397893 CFAP70Q5T0N1 1121 aa10.15□□□□□ -0.78
SUMO3-202ENST00000397893 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.78
SUMO3-202ENST00000397893 RGS12O14924 1447 aa10.15□□□□□ -0.79
SUMO3-202ENST00000397893 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
SUMO3-202ENST00000397893 NUTM2FA1L443 756 aa10.14□□□□□ -0.79
SUMO3-202ENST00000397893 XPCQ01831 940 aaPredicted RBP10.14□□□□□ -0.79
SUMO3-202ENST00000397893 IFT172Q9UG01 1749 aa10.13□□□□□ -0.79
SUMO3-202ENST00000397893 USP21Q9UK80 565 aa10.13□□□□□ -0.79
SUMO3-202ENST00000397893 COL22A1Q8NFW1 1626 aaPredicted RBP10.13□□□□□ -0.79
SUMO3-202ENST00000397893 ATRNO75882 1429 aa10.13□□□□□ -0.79
SUMO3-202ENST00000397893 SPATA31A3Q5VYP0 1347 aa10.12□□□□□ -0.79
SUMO3-202ENST00000397893 BCL9LQ86UU0 1499 aa10.12□□□□□ -0.79
SUMO3-202ENST00000397893 TRPC5Q9UL62 973 aaPredicted RBP10.12□□□□□ -0.79
SUMO3-202ENST00000397893 PIAS4Q8N2W9 510 aaPredicted RBP10.11□□□□□ -0.79
SUMO3-202ENST00000397893 DHX57Q6P158 1386 aaKnown RBP10.11□□□□□ -0.79
SUMO3-202ENST00000397893 KNDC1Q76NI1 1749 aa10.1□□□□□ -0.79
SUMO3-202ENST00000397893 KRT28Q7Z3Y7 464 aa10.1□□□□□ -0.79
SUMO3-202ENST00000397893 PRAM1Q96QH2 718 aa10.1□□□□□ -0.79
SUMO3-202ENST00000397893 ADGRB1O14514 1584 aa10.09□□□□□ -0.79
SUMO3-202ENST00000397893 DLC1Q96QB1 1528 aa10.09□□□□□ -0.79
SUMO3-202ENST00000397893 PHF8Q9UPP1 1060 aa10.09□□□□□ -0.79
SUMO3-202ENST00000397893 FMN2Q9NZ56 1722 aa10.08□□□□□ -0.8
SUMO3-202ENST00000397893 CCER1Q8TC90 406 aaPredicted RBP10.08□□□□□ -0.8
SUMO3-202ENST00000397893 SLIT2O94813 1529 aa10.07□□□□□ -0.8
SUMO3-202ENST00000397893 SBNO1A3KN83 1393 aa10.07□□□□□ -0.8
SUMO3-202ENST00000397893 SAFB2Q14151 953 aaKnown RBP eCLIP10.07□□□□□ -0.8
SUMO3-202ENST00000397893 GJD4Q96KN9 370 aaPredicted RBP10.07□□□□□ -0.8
SUMO3-202ENST00000397893 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
SUMO3-202ENST00000397893 PRR36Q9H6K5 1346 aa10.07□□□□□ -0.8
SUMO3-202ENST00000397893 UNC5CLQ8IV45 518 aa10.06□□□□□ -0.8
SUMO3-202ENST00000397893 CABLES1Q8TDN4 633 aa10.06□□□□□ -0.8
SUMO3-202ENST00000397893 STAC3Q96MF2 364 aa10.06□□□□□ -0.8
SUMO3-202ENST00000397893 TNS3Q68CZ2 1445 aa10.06□□□□□ -0.8
SUMO3-202ENST00000397893 ANKARQ7Z5J8 1434 aa10.06□□□□□ -0.8
SUMO3-202ENST00000397893 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
SUMO3-202ENST00000397893 PSME1Q06323 249 aa10.05□□□□□ -0.8
SUMO3-202ENST00000397893 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
SUMO3-202ENST00000397893 POGKQ9P215 609 aa10.05□□□□□ -0.8
SUMO3-202ENST00000397893 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
SUMO3-202ENST00000397893 ZBTB22O15209 634 aa10.04□□□□□ -0.8
SUMO3-202ENST00000397893 ONECUT3O60422 494 aaPredicted RBP10.04□□□□□ -0.8
SUMO3-202ENST00000397893 PMFBP1Q8TBY8 1022 aa10.04□□□□□ -0.8
SUMO3-202ENST00000397893 KDM2AQ9Y2K7 1162 aa10.04□□□□□ -0.8
SUMO3-202ENST00000397893 EP400Q96L91 3159 aa10.04□□□□□ -0.8
SUMO3-202ENST00000397893 RALGAPBQ86X10 1494 aa10.04□□□□□ -0.8
SUMO3-202ENST00000397893 KIF1AQ12756 1690 aa10.03□□□□□ -0.8
SUMO3-202ENST00000397893 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
SUMO3-202ENST00000397893 WASLO00401 505 aaPredicted RBP10.03□□□□□ -0.8
SUMO3-202ENST00000397893 ADGRB2O60241 1585 aa10.03□□□□□ -0.8
SUMO3-202ENST00000397893 HIRIP3Q9BW71 556 aaPredicted RBP10.03□□□□□ -0.8
SUMO3-202ENST00000397893 USP32Q8NFA0 1604 aa10.03□□□□□ -0.8
SUMO3-202ENST00000397893 MINK1Q8N4C8 1332 aaPredicted RBP10.03□□□□□ -0.8
SUMO3-202ENST00000397893 GLI3P10071 1580 aa10.02□□□□□ -0.81
SUMO3-202ENST00000397893 VPS72Q15906 364 aa10.02□□□□□ -0.81
SUMO3-202ENST00000397893 ARHGEF10O15013 1369 aa10.01□□□□□ -0.81
SUMO3-202ENST00000397893 CCDC125Q86Z20 511 aa10.01□□□□□ -0.81
SUMO3-202ENST00000397893 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.99□□□□□ -0.81
SUMO3-202ENST00000397893 MARF1Q9Y4F3 1742 aaKnown RBP9.99□□□□□ -0.81
SUMO3-202ENST00000397893 RGPD8O14715 1765 aaPredicted RBP9.99□□□□□ -0.81
SUMO3-202ENST00000397893 TULP4Q9NRJ4 1543 aa9.99□□□□□ -0.81
SUMO3-202ENST00000397893 SEPT12Q8IYM1 358 aa9.99□□□□□ -0.81
SUMO3-202ENST00000397893 CNKSR2Q8WXI2 1034 aa9.99□□□□□ -0.81
SUMO3-202ENST00000397893 EIF3AQ14152 1382 aaKnown RBP9.99□□□□□ -0.81
SUMO3-202ENST00000397893 NBPF1Q3BBV0 1214 aa9.98□□□□□ -0.81
SUMO3-202ENST00000397893 LMOD2Q6P5Q4 547 aa9.98□□□□□ -0.81
SUMO3-202ENST00000397893 NUDT16Q96DE0 195 aaKnown RBP9.98□□□□□ -0.81
SUMO3-202ENST00000397893 TRPM3Q9HCF6 1732 aaPredicted RBP9.97□□□□□ -0.81
SUMO3-202ENST00000397893 PLEKHG5O94827 1062 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms