RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 HSP90AA2PQ14568 343 aaPredicted RBP7.55□□□□□ -1.2
PGBD4-201ENST00000397766 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 CASKIN1Q8WXD9 1431 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 XBP1P17861 261 aa7.54□□□□□ -1.2
PGBD4-201ENST00000397766 DMRT2Q9Y5R5 561 aa7.54□□□□□ -1.2
PGBD4-201ENST00000397766 FGD5Q6ZNL6 1462 aa7.54□□□□□ -1.2
PGBD4-201ENST00000397766 RAPGEF4Q8WZA2 1011 aa7.54□□□□□ -1.2
PGBD4-201ENST00000397766 ARGLU1Q9NWB6 273 aaPredicted RBP7.54□□□□□ -1.2
PGBD4-201ENST00000397766 KIF7Q2M1P5 1343 aa7.54□□□□□ -1.2
PGBD4-201ENST00000397766 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.54□□□□□ -1.2
PGBD4-201ENST00000397766 PLIN1O60240 522 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 DHX8Q14562 1220 aaKnown RBP7.53□□□□□ -1.2
PGBD4-201ENST00000397766 ANKRD50Q9ULJ7 1429 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 PLEKHH2Q8IVE3 1493 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 CCAR2Q8N163 923 aaKnown RBP7.53□□□□□ -1.2
PGBD4-201ENST00000397766 CCDC43Q96MW1 224 aaKnown RBP7.53□□□□□ -1.2
PGBD4-201ENST00000397766 DHX16O60231 1041 aaKnown RBP7.53□□□□□ -1.2
PGBD4-201ENST00000397766 PDE4CQ08493 712 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 GAS2L2Q8NHY3 880 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 AK7Q96M32 723 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 IGF1RP08069 1367 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 GNAI3P08754 354 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 RALYLQ86SE5 291 aaKnown RBP7.53□□□□□ -1.2
PGBD4-201ENST00000397766 ERC1Q8IUD2 1116 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 CNTROBQ8N137 903 aa7.53□□□□□ -1.2
PGBD4-201ENST00000397766 SMG6Q86US8 1419 aaKnown RBP7.53□□□□□ -1.2
PGBD4-201ENST00000397766 HFM1A2PYH4 1435 aa7.52□□□□□ -1.2
PGBD4-201ENST00000397766 OLFM4Q6UX06 510 aa7.52□□□□□ -1.2
PGBD4-201ENST00000397766 RBM33Q96EV2 1170 aaKnown RBP7.52□□□□□ -1.2
PGBD4-201ENST00000397766 ARID3AQ99856 593 aa7.52□□□□□ -1.2
PGBD4-201ENST00000397766 MCM2P49736 904 aa7.52□□□□□ -1.21
PGBD4-201ENST00000397766 CCP110O43303 1012 aa7.52□□□□□ -1.21
PGBD4-201ENST00000397766 UBTFL1P0CB47 393 aaPredicted RBP7.52□□□□□ -1.21
PGBD4-201ENST00000397766 CCDC39Q9UFE4 941 aa7.52□□□□□ -1.21
PGBD4-201ENST00000397766 LRRC9Q6ZRR7 1453 aa7.52□□□□□ -1.21
PGBD4-201ENST00000397766 CCDC30Q5VVM6 783 aa7.52□□□□□ -1.21
PGBD4-201ENST00000397766 RIC3Q7Z5B4 369 aa7.52□□□□□ -1.21
PGBD4-201ENST00000397766 C22orf23Q9BZE7 217 aa7.52□□□□□ -1.21
PGBD4-201ENST00000397766 GPRASP1Q5JY77 1395 aa7.52□□□□□ -1.21
PGBD4-201ENST00000397766 SART3Q15020 963 aaKnown RBP7.51□□□□□ -1.21
PGBD4-201ENST00000397766 HOMER1Q86YM7 354 aa7.51□□□□□ -1.21
PGBD4-201ENST00000397766 PIP4K2AP48426 406 aaPredicted RBP7.51□□□□□ -1.21
PGBD4-201ENST00000397766 KIF21BO75037 1637 aa7.51□□□□□ -1.21
PGBD4-201ENST00000397766 VPS37CA5D8V6 355 aaPredicted RBP7.51□□□□□ -1.21
PGBD4-201ENST00000397766 TBC1D2BQ9UPU7 963 aa7.51□□□□□ -1.21
PGBD4-201ENST00000397766 NCOA2Q15596 1464 aa7.51□□□□□ -1.21
PGBD4-201ENST00000397766 CT47B1P0C2W7 299 aaPredicted RBP7.51□□□□□ -1.21
PGBD4-201ENST00000397766 RUFY1Q96T51 708 aa7.51□□□□□ -1.21
PGBD4-201ENST00000397766 IFT140Q96RY7 1462 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 RDXP35241 583 aaKnown RBP7.5□□□□□ -1.21
PGBD4-201ENST00000397766 ERCC4Q92889 916 aaPredicted RBP7.5□□□□□ -1.21
PGBD4-201ENST00000397766 SLC3A2P08195 630 aaKnown RBP7.5□□□□□ -1.21
PGBD4-201ENST00000397766 PNISRQ8TF01 805 aaKnown RBP7.5□□□□□ -1.21
PGBD4-201ENST00000397766 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 GCC1Q96CN9 775 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 ERICH3Q5RHP9 1530 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 RAD21O60216 631 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 PLEKHO1Q53GL0 409 aaPredicted RBP7.5□□□□□ -1.21
PGBD4-201ENST00000397766 MYO6Q9UM54 1294 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 AMER1Q5JTC6 1135 aaPredicted RBP7.5□□□□□ -1.21
PGBD4-201ENST00000397766 MNS1Q8NEH6 495 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 ARHGAP5Q13017 1502 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 MBD3O95983 291 aa7.5□□□□□ -1.21
PGBD4-201ENST00000397766 EFCAB5A4FU69 1503 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 SYNJ2O15056 1496 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 PRDM2Q13029 1718 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 MTERF4Q7Z6M4 381 aaKnown RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 CWC22Q9HCG8 908 aaKnown RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 MRE11P49959 708 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 CCDC173Q0VFZ6 552 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 PDCP20941 246 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 WASHC4Q2M389 1173 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 NOM1Q5C9Z4 860 aaKnown RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 GRIN2BQ13224 1484 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 RABEP1Q15276 862 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 ZNF771Q7L3S4 317 aaPredicted RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 FBXW7Q969H0 707 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 ZNF396Q96N95 335 aaPredicted RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 PPP1R1BQ9UD71 204 aaPredicted RBP7.49□□□□□ -1.21
PGBD4-201ENST00000397766 EHBP1L1Q8N3D4 1523 aa7.49□□□□□ -1.21
PGBD4-201ENST00000397766 KIF6Q6ZMV9 814 aa7.48□□□□□ -1.21
PGBD4-201ENST00000397766 FSD1Q9BTV5 496 aa7.48□□□□□ -1.21
PGBD4-201ENST00000397766 CLASRPQ8N2M8 674 aaKnown RBP7.48□□□□□ -1.21
PGBD4-201ENST00000397766 RUSC2Q8N2Y8 1516 aa7.48□□□□□ -1.21
PGBD4-201ENST00000397766 SLC4A3P48751 1232 aa7.48□□□□□ -1.21
PGBD4-201ENST00000397766 NEUROD6Q96NK8 337 aa7.48□□□□□ -1.21
PGBD4-201ENST00000397766 CT47A1Q5JQC4 288 aaPredicted RBP7.48□□□□□ -1.21
PGBD4-201ENST00000397766 EPS15P42566 896 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 SYTL4Q96C24 671 aaPredicted RBP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 PDE3AQ14432 1141 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 FOXD4L6Q3SYB3 417 aaPredicted RBP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 HSP90B2PQ58FF3 399 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 FOXD4L3Q6VB84 417 aaPredicted RBP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 SMARCE1Q969G3 411 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 NLRP2Q9NX02 1062 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 FAM43AQ8N2R8 423 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 TXLNBQ8N3L3 684 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms