RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 UHRF1BP1LA0JNW5 1464 aa28.06■■■□□ 2.08
NFIX-203ENST00000397661 FRAT2O75474 233 aaPredicted RBP28.05■■■□□ 2.08
NFIX-203ENST00000397661 PCDHB15Q9Y5E8 787 aa28.05■■■□□ 2.08
NFIX-203ENST00000397661 FBLN1P23142 703 aa28.05■■■□□ 2.08
NFIX-203ENST00000397661 SPRYD3Q8NCJ5 442 aa28.05■■■□□ 2.08
NFIX-203ENST00000397661 SLKQ9H2G2 1235 aaPredicted RBP28.05■■■□□ 2.08
NFIX-203ENST00000397661 CEP152O94986 1710 aa28.05■■■□□ 2.08
NFIX-203ENST00000397661 CFAP53Q96M91 514 aa28.05■■■□□ 2.08
NFIX-203ENST00000397661 KDM5AP29375 1690 aaKnown RBP28.04■■■□□ 2.08
NFIX-203ENST00000397661 MINK1Q8N4C8 1332 aaPredicted RBP28.04■■■□□ 2.08
NFIX-203ENST00000397661 MYOM1P52179 1685 aa28.03■■■□□ 2.08
NFIX-203ENST00000397661 NPC1L1Q9UHC9 1359 aa28.03■■■□□ 2.08
NFIX-203ENST00000397661 ABCA6Q8N139 1617 aa28.03■■■□□ 2.08
NFIX-203ENST00000397661 CGNL1Q0VF96 1302 aa28.03■■■□□ 2.08
NFIX-203ENST00000397661 TET3O43151 1660 aa28.02■■■□□ 2.08
NFIX-203ENST00000397661 SLC24A1O60721 1099 aa28.01■■■□□ 2.07
NFIX-203ENST00000397661 CLASP1Q7Z460 1538 aa27.99■■■□□ 2.07
NFIX-203ENST00000397661 PDE3AQ14432 1141 aa27.98■■■□□ 2.07
NFIX-203ENST00000397661 MAP3K4Q9Y6R4 1608 aa27.98■■■□□ 2.07
NFIX-203ENST00000397661 NPATQ14207 1427 aa27.98■■■□□ 2.07
NFIX-203ENST00000397661 FTSJ3Q8IY81 847 aaKnown RBP27.97■■■□□ 2.07
NFIX-203ENST00000397661 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
NFIX-203ENST00000397661 IDI1Q13907 227 aa27.96■■■□□ 2.07
NFIX-203ENST00000397661 EVC2Q86UK5 1308 aa27.95■■■□□ 2.07
NFIX-203ENST00000397661 POGKQ9P215 609 aa27.94■■■□□ 2.06
NFIX-203ENST00000397661 PDZRN3Q9UPQ7 1066 aa27.94■■■□□ 2.06
NFIX-203ENST00000397661 SMC4Q9NTJ3 1288 aa27.92■■■□□ 2.06
NFIX-203ENST00000397661 EXOSC9Q06265 439 aaKnown RBP27.92■■■□□ 2.06
NFIX-203ENST00000397661 CD109Q6YHK3 1445 aa27.92■■■□□ 2.06
NFIX-203ENST00000397661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.92■■■□□ 2.06
NFIX-203ENST00000397661 MROH2AA6NES4 1674 aa27.91■■■□□ 2.06
NFIX-203ENST00000397661 VGFO15240 615 aaPredicted RBP27.91■■■□□ 2.06
NFIX-203ENST00000397661 STAG3Q9UJ98 1225 aa27.9■■■□□ 2.06
NFIX-203ENST00000397661 INO80Q9ULG1 1556 aaPredicted RBP27.9■■■□□ 2.06
NFIX-203ENST00000397661 PPRC1Q5VV67 1664 aaKnown RBP27.9■■■□□ 2.06
NFIX-203ENST00000397661 MROH1Q8NDA8 1641 aa27.89■■■□□ 2.06
NFIX-203ENST00000397661 ITPRIPQ8IWB1 547 aa27.89■■■□□ 2.05
NFIX-203ENST00000397661 KIF1BO60333 1816 aa27.89■■■□□ 2.05
NFIX-203ENST00000397661 DEPDC5O75140 1603 aa27.88■■■□□ 2.05
NFIX-203ENST00000397661 MYOM2P54296 1465 aa27.88■■■□□ 2.05
NFIX-203ENST00000397661 PRAM1Q96QH2 718 aa27.88■■■□□ 2.05
NFIX-203ENST00000397661 EFCAB6Q5THR3 1501 aa27.88■■■□□ 2.05
NFIX-203ENST00000397661 FBXO31Q5XUX0 539 aaPredicted RBP27.87■■■□□ 2.05
NFIX-203ENST00000397661 USP19O94966 1318 aa27.86■■■□□ 2.05
NFIX-203ENST00000397661 MYH16Q9H6N6 1097 aa27.86■■■□□ 2.05
NFIX-203ENST00000397661 MAPK8IP3Q9UPT6 1336 aa27.86■■■□□ 2.05
NFIX-203ENST00000397661 VWDEQ8N2E2 1590 aa27.85■■■□□ 2.05
NFIX-203ENST00000397661 WDR63Q8IWG1 891 aa27.84■■■□□ 2.05
NFIX-203ENST00000397661 ELL2O00472 640 aaPredicted RBP27.83■■■□□ 2.05
NFIX-203ENST00000397661 PMFBP1Q8TBY8 1022 aa27.83■■■□□ 2.05
NFIX-203ENST00000397661 ZNF518AQ6AHZ1 1483 aa27.83■■■□□ 2.05
NFIX-203ENST00000397661 MLECQ14165 292 aa27.83■■■□□ 2.04
NFIX-203ENST00000397661 ABCA9Q8IUA7 1624 aa27.83■■■□□ 2.04
NFIX-203ENST00000397661 KIDINS220Q9ULH0 1771 aa27.82■■■□□ 2.04
NFIX-203ENST00000397661 RIPK4P57078 832 aa27.82■■■□□ 2.04
NFIX-203ENST00000397661 DZIP1LQ8IYY4 767 aaKnown RBP27.82■■■□□ 2.04
NFIX-203ENST00000397661 ZKSCAN2Q63HK3 967 aa27.82■■■□□ 2.04
NFIX-203ENST00000397661 NGEFQ8N5V2 710 aa27.81■■■□□ 2.04
NFIX-203ENST00000397661 SSH1Q8WYL5 1049 aa27.81■■■□□ 2.04
NFIX-203ENST00000397661 RWDD1Q9H446 243 aaPredicted RBP27.81■■■□□ 2.04
NFIX-203ENST00000397661 MFAP1P55081 439 aaKnown RBP27.8■■■□□ 2.04
NFIX-203ENST00000397661 THUMPD2Q9BTF0 503 aaKnown RBP27.8■■■□□ 2.04
NFIX-203ENST00000397661 TMPOP42166 694 aaKnown RBP27.8■■■□□ 2.04
NFIX-203ENST00000397661 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
NFIX-203ENST00000397661 CABP1Q9NZU7 370 aa27.8■■■□□ 2.04
NFIX-203ENST00000397661 HMOX1P09601 288 aa27.79■■■□□ 2.04
NFIX-203ENST00000397661 UPF2Q9HAU5 1272 aaKnown RBP27.79■■■□□ 2.04
NFIX-203ENST00000397661 NOB1Q9ULX3 412 aaKnown RBP27.79■■■□□ 2.04
NFIX-203ENST00000397661 ARAP3Q8WWN8 1544 aa27.78■■■□□ 2.04
NFIX-203ENST00000397661 MVPQ14764 893 aaKnown RBP27.78■■■□□ 2.04
NFIX-203ENST00000397661 A0A1W2PP64 1363 aa27.78■■■□□ 2.04
NFIX-203ENST00000397661 FYB1O15117 783 aa27.78■■■□□ 2.04
NFIX-203ENST00000397661 SBNO2Q9Y2G9 1366 aa27.77■■■□□ 2.04
NFIX-203ENST00000397661 TRIM27P14373 513 aa27.77■■■□□ 2.04
NFIX-203ENST00000397661 WAPLQ7Z5K2 1190 aa27.76■■■□□ 2.04
NFIX-203ENST00000397661 TRIM35Q9UPQ4 493 aa27.74■■■□□ 2.03
NFIX-203ENST00000397661 PHF23Q9BUL5 403 aaPredicted RBP27.74■■■□□ 2.03
NFIX-203ENST00000397661 ANKRD36BQ8N2N9 1353 aa27.74■■■□□ 2.03
NFIX-203ENST00000397661 BECN1Q14457 450 aa27.73■■■□□ 2.03
NFIX-203ENST00000397661 ADGRB3O60242 1522 aa27.72■■■□□ 2.03
NFIX-203ENST00000397661 RPGRIP1LQ68CZ1 1315 aa27.72■■■□□ 2.03
NFIX-203ENST00000397661 CDK19Q9BWU1 502 aa27.72■■■□□ 2.03
NFIX-203ENST00000397661 TMEM57Q8N5G2 664 aa27.72■■■□□ 2.03
NFIX-203ENST00000397661 GZF1Q9H116 711 aaPredicted RBP27.72■■■□□ 2.03
NFIX-203ENST00000397661 KIAA1210Q9ULL0 1709 aa27.71■■■□□ 2.03
NFIX-203ENST00000397661 NRXN1Q9ULB1 1477 aa27.71■■■□□ 2.03
NFIX-203ENST00000397661 QRICH2Q9H0J4 1663 aa27.71■■■□□ 2.03
NFIX-203ENST00000397661 POGZQ7Z3K3 1410 aa27.7■■■□□ 2.03
NFIX-203ENST00000397661 DIAPH1O60610 1272 aaKnown RBP27.7■■■□□ 2.03
NFIX-203ENST00000397661 C1orf115Q9H7X2 142 aa27.7■■■□□ 2.03
NFIX-203ENST00000397661 TERF2IPQ9NYB0 399 aa27.7■■■□□ 2.03
NFIX-203ENST00000397661 ADGRB1O14514 1584 aa27.69■■■□□ 2.02
NFIX-203ENST00000397661 CYB5RLQ6IPT4 315 aa27.68■■■□□ 2.02
NFIX-203ENST00000397661 LNPKQ9C0E8 428 aa27.68■■■□□ 2.02
NFIX-203ENST00000397661 PRKAR2BP31323 418 aa27.67■■■□□ 2.02
NFIX-203ENST00000397661 PLEKHF1Q96S99 279 aa27.67■■■□□ 2.02
NFIX-203ENST00000397661 TBC1D2Q9BYX2 928 aa27.67■■■□□ 2.02
NFIX-203ENST00000397661 ZRANB1Q9UGI0 708 aa27.67■■■□□ 2.02
NFIX-203ENST00000397661 CCDC27Q2M243 656 aa27.66■■■□□ 2.02
NFIX-203ENST00000397661 HDGFL2Q7Z4V5 671 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms