RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.4
LMCD1-202ENST00000397386 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.39
LMCD1-202ENST00000397386 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.39
LMCD1-202ENST00000397386 SAFB2Q14151 953 aaKnown RBP eCLIP17.51■□□□□ 0.39
LMCD1-202ENST00000397386 POLR3GLQ9BT43 218 aa17.51■□□□□ 0.39
LMCD1-202ENST00000397386 KCNA6P17658 529 aa17.5■□□□□ 0.39
LMCD1-202ENST00000397386 NWD1Q149M9 1564 aa17.5■□□□□ 0.39
LMCD1-202ENST00000397386 MINK1Q8N4C8 1332 aaPredicted RBP17.49■□□□□ 0.39
LMCD1-202ENST00000397386 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
LMCD1-202ENST00000397386 STRCQ7RTU9 1775 aa17.49■□□□□ 0.39
LMCD1-202ENST00000397386 ATAD2Q6PL18 1390 aa17.47■□□□□ 0.39
LMCD1-202ENST00000397386 NINLQ9Y2I6 1382 aa17.47■□□□□ 0.39
LMCD1-202ENST00000397386 NKTRP30414 1462 aaKnown RBP17.46■□□□□ 0.39
LMCD1-202ENST00000397386 WASLO00401 505 aaPredicted RBP17.46■□□□□ 0.39
LMCD1-202ENST00000397386 MYOM1P52179 1685 aa17.45■□□□□ 0.38
LMCD1-202ENST00000397386 CDK19Q9BWU1 502 aa17.45■□□□□ 0.38
LMCD1-202ENST00000397386 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
LMCD1-202ENST00000397386 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.45■□□□□ 0.38
LMCD1-202ENST00000397386 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
LMCD1-202ENST00000397386 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
LMCD1-202ENST00000397386 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
LMCD1-202ENST00000397386 PANK3Q9H999 370 aa17.42■□□□□ 0.38
LMCD1-202ENST00000397386 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
LMCD1-202ENST00000397386 ANP32CO43423 234 aa17.41■□□□□ 0.38
LMCD1-202ENST00000397386 MIER1Q8N108 512 aa17.39■□□□□ 0.37
LMCD1-202ENST00000397386 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
LMCD1-202ENST00000397386 SLC12A5Q9H2X9 1139 aa17.38■□□□□ 0.37
LMCD1-202ENST00000397386 CDC42BPGQ6DT37 1551 aa17.37■□□□□ 0.37
LMCD1-202ENST00000397386 KTN1Q86UP2 1357 aaKnown RBP17.37■□□□□ 0.37
LMCD1-202ENST00000397386 ANKRD36BQ8N2N9 1353 aa17.37■□□□□ 0.37
LMCD1-202ENST00000397386 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
LMCD1-202ENST00000397386 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
LMCD1-202ENST00000397386 ATP7BP35670 1465 aa17.36■□□□□ 0.37
LMCD1-202ENST00000397386 NPC1L1Q9UHC9 1359 aa17.36■□□□□ 0.37
LMCD1-202ENST00000397386 PROSER2Q86WR7 435 aaPredicted RBP17.36■□□□□ 0.37
LMCD1-202ENST00000397386 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
LMCD1-202ENST00000397386 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
LMCD1-202ENST00000397386 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
LMCD1-202ENST00000397386 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
LMCD1-202ENST00000397386 NALCNQ8IZF0 1738 aa17.35■□□□□ 0.37
LMCD1-202ENST00000397386 STRCP1A6NGW2 1772 aa17.34■□□□□ 0.37
LMCD1-202ENST00000397386 PRKRIP1Q9H875 184 aaPredicted RBP17.34■□□□□ 0.37
LMCD1-202ENST00000397386 CABP1Q9NZU7 370 aa17.33■□□□□ 0.37
LMCD1-202ENST00000397386 PRR36Q9H6K5 1346 aa17.33■□□□□ 0.36
LMCD1-202ENST00000397386 PPIP5K1Q6PFW1 1433 aa17.33■□□□□ 0.36
LMCD1-202ENST00000397386 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
LMCD1-202ENST00000397386 FMN2Q9NZ56 1722 aa17.32■□□□□ 0.36
LMCD1-202ENST00000397386 TOPAZ1Q8N9V7 1692 aa17.32■□□□□ 0.36
LMCD1-202ENST00000397386 CARD14Q9BXL6 1004 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 C19orf44Q9H6X5 657 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 TMEM94Q12767 1356 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 DCCP43146 1447 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 PLEKHG3A1L390 1219 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 RALBP1Q15311 655 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 AMER1Q5JTC6 1135 aaPredicted RBP17.31■□□□□ 0.36
LMCD1-202ENST00000397386 HDGFL2Q7Z4V5 671 aaPredicted RBP17.31■□□□□ 0.36
LMCD1-202ENST00000397386 USP32Q8NFA0 1604 aa17.31■□□□□ 0.36
LMCD1-202ENST00000397386 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
LMCD1-202ENST00000397386 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
LMCD1-202ENST00000397386 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
LMCD1-202ENST00000397386 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
LMCD1-202ENST00000397386 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
LMCD1-202ENST00000397386 ZNF335Q9H4Z2 1342 aaPredicted RBP17.28■□□□□ 0.36
LMCD1-202ENST00000397386 NSD3Q9BZ95 1437 aa17.28■□□□□ 0.36
LMCD1-202ENST00000397386 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
LMCD1-202ENST00000397386 LRRC7Q96NW7 1537 aa17.27■□□□□ 0.36
LMCD1-202ENST00000397386 NSD2O96028 1365 aa17.27■□□□□ 0.35
LMCD1-202ENST00000397386 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
LMCD1-202ENST00000397386 EDC4Q6P2E9 1401 aaKnown RBP17.25■□□□□ 0.35
LMCD1-202ENST00000397386 POLR3AO14802 1390 aaPredicted RBP17.25■□□□□ 0.35
LMCD1-202ENST00000397386 MSH6P52701 1360 aa17.24■□□□□ 0.35
LMCD1-202ENST00000397386 AKAP12Q02952 1782 aa17.24■□□□□ 0.35
LMCD1-202ENST00000397386 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
LMCD1-202ENST00000397386 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
LMCD1-202ENST00000397386 CADPS2Q86UW7 1296 aa17.23■□□□□ 0.35
LMCD1-202ENST00000397386 MON2Q7Z3U7 1717 aa17.23■□□□□ 0.35
LMCD1-202ENST00000397386 ACEP12821 1306 aa17.22■□□□□ 0.35
LMCD1-202ENST00000397386 MYBBP1AQ9BQG0 1328 aaKnown RBP17.22■□□□□ 0.35
LMCD1-202ENST00000397386 ATF3P18847 181 aa17.22■□□□□ 0.35
LMCD1-202ENST00000397386 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
LMCD1-202ENST00000397386 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
LMCD1-202ENST00000397386 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.35
LMCD1-202ENST00000397386 USP6P35125 1406 aa17.21■□□□□ 0.34
LMCD1-202ENST00000397386 C1orf167Q5SNV9 1468 aa17.19■□□□□ 0.34
LMCD1-202ENST00000397386 MST1RQ04912 1400 aa17.19■□□□□ 0.34
LMCD1-202ENST00000397386 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
LMCD1-202ENST00000397386 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
LMCD1-202ENST00000397386 FYB1O15117 783 aa17.18■□□□□ 0.34
LMCD1-202ENST00000397386 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
LMCD1-202ENST00000397386 NGDNQ8NEJ9 315 aaKnown RBP17.18■□□□□ 0.34
LMCD1-202ENST00000397386 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
LMCD1-202ENST00000397386 PMFBP1Q8TBY8 1022 aa17.17■□□□□ 0.34
LMCD1-202ENST00000397386 LTBP4Q8N2S1 1624 aa17.17■□□□□ 0.34
LMCD1-202ENST00000397386 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
LMCD1-202ENST00000397386 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
LMCD1-202ENST00000397386 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
LMCD1-202ENST00000397386 CNGB1Q14028 1251 aaPredicted RBP17.16■□□□□ 0.34
LMCD1-202ENST00000397386 MORC1Q86VD1 984 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms