RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ANKRD30BQ9BXX2 1392 aa19.12■□□□□ 0.65
SEC13-209ENST00000397117 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
SEC13-209ENST00000397117 PTCH1Q13635 1447 aa19.11■□□□□ 0.65
SEC13-209ENST00000397117 ROBO2Q9HCK4 1378 aa19.11■□□□□ 0.65
SEC13-209ENST00000397117 VGFO15240 615 aaPredicted RBP19.1■□□□□ 0.65
SEC13-209ENST00000397117 NGLY1Q96IV0 654 aa19.1■□□□□ 0.65
SEC13-209ENST00000397117 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
SEC13-209ENST00000397117 ADAMTS2O95450 1211 aa19.09■□□□□ 0.65
SEC13-209ENST00000397117 PRAG1Q86YV5 1406 aa19.09■□□□□ 0.65
SEC13-209ENST00000397117 RPGRIP1LQ68CZ1 1315 aa19.06■□□□□ 0.64
SEC13-209ENST00000397117 TIMELESSQ9UNS1 1208 aa19.05■□□□□ 0.64
SEC13-209ENST00000397117 FNBP4Q8N3X1 1017 aaPredicted RBP19.04■□□□□ 0.64
SEC13-209ENST00000397117 TONSLQ96HA7 1378 aa19.04■□□□□ 0.64
SEC13-209ENST00000397117 PPLO60437 1756 aa19.04■□□□□ 0.64
SEC13-209ENST00000397117 COL22A1Q8NFW1 1626 aaPredicted RBP19.04■□□□□ 0.64
SEC13-209ENST00000397117 USP21Q9UK80 565 aa19.03■□□□□ 0.64
SEC13-209ENST00000397117 TRPC5Q9UL62 973 aaPredicted RBP19.02■□□□□ 0.64
SEC13-209ENST00000397117 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
SEC13-209ENST00000397117 ATRNO75882 1429 aa19■□□□□ 0.63
SEC13-209ENST00000397117 ATAD2Q6PL18 1390 aa19■□□□□ 0.63
SEC13-209ENST00000397117 MYOM2P54296 1465 aa18.98■□□□□ 0.63
SEC13-209ENST00000397117 MARF1Q9Y4F3 1742 aaKnown RBP18.98■□□□□ 0.63
SEC13-209ENST00000397117 CDC42BPGQ6DT37 1551 aa18.97■□□□□ 0.63
SEC13-209ENST00000397117 PXDNQ92626 1479 aa18.97■□□□□ 0.63
SEC13-209ENST00000397117 NPHP3Q7Z494 1330 aa18.97■□□□□ 0.63
SEC13-209ENST00000397117 ESCO1Q5FWF5 840 aa18.96■□□□□ 0.63
SEC13-209ENST00000397117 BCL9LQ86UU0 1499 aa18.95■□□□□ 0.62
SEC13-209ENST00000397117 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
SEC13-209ENST00000397117 FOXO3O43524 673 aa18.93■□□□□ 0.62
SEC13-209ENST00000397117 WAPLQ7Z5K2 1190 aa18.92■□□□□ 0.62
SEC13-209ENST00000397117 TECPR2O15040 1411 aa18.91■□□□□ 0.62
SEC13-209ENST00000397117 XPCQ01831 940 aaPredicted RBP18.91■□□□□ 0.62
SEC13-209ENST00000397117 L3MBTL2Q969R5 705 aa18.91■□□□□ 0.62
SEC13-209ENST00000397117 LRPPRCP42704 1394 aaKnown RBP18.9■□□□□ 0.62
SEC13-209ENST00000397117 ABCC11Q96J66 1382 aa18.89■□□□□ 0.62
SEC13-209ENST00000397117 CCDC125Q86Z20 511 aa18.89■□□□□ 0.62
SEC13-209ENST00000397117 GJD4Q96KN9 370 aaPredicted RBP18.89■□□□□ 0.62
SEC13-209ENST00000397117 STK26Q9P289 416 aa18.89■□□□□ 0.62
SEC13-209ENST00000397117 IFT172Q9UG01 1749 aa18.89■□□□□ 0.61
SEC13-209ENST00000397117 SPATA31E1Q6ZUB1 1445 aa18.88■□□□□ 0.61
SEC13-209ENST00000397117 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.88■□□□□ 0.61
SEC13-209ENST00000397117 NUTM2FA1L443 756 aa18.88■□□□□ 0.61
SEC13-209ENST00000397117 KNDC1Q76NI1 1749 aa18.88■□□□□ 0.61
SEC13-209ENST00000397117 ZRANB1Q9UGI0 708 aa18.87■□□□□ 0.61
SEC13-209ENST00000397117 PLEKHH1Q9ULM0 1364 aa18.87■□□□□ 0.61
SEC13-209ENST00000397117 FMN2Q9NZ56 1722 aa18.87■□□□□ 0.61
SEC13-209ENST00000397117 RGL3Q3MIN7 710 aa18.86■□□□□ 0.61
SEC13-209ENST00000397117 TMEM132EQ6IEE7 984 aa18.86■□□□□ 0.61
SEC13-209ENST00000397117 EP400Q96L91 3159 aa18.85■□□□□ 0.61
SEC13-209ENST00000397117 SPATA31A3Q5VYP0 1347 aa18.85■□□□□ 0.61
SEC13-209ENST00000397117 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
SEC13-209ENST00000397117 SLIT2O94813 1529 aa18.85■□□□□ 0.61
SEC13-209ENST00000397117 UNC5CLQ8IV45 518 aa18.85■□□□□ 0.61
SEC13-209ENST00000397117 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
SEC13-209ENST00000397117 GLI3P10071 1580 aa18.83■□□□□ 0.61
SEC13-209ENST00000397117 SIRT1Q96EB6 747 aa18.83■□□□□ 0.61
SEC13-209ENST00000397117 RGPD8O14715 1765 aaPredicted RBP18.82■□□□□ 0.6
SEC13-209ENST00000397117 KRT28Q7Z3Y7 464 aa18.82■□□□□ 0.6
SEC13-209ENST00000397117 PIK3C2GO75747 1445 aa18.82■□□□□ 0.6
SEC13-209ENST00000397117 RALGAPBQ86X10 1494 aa18.82■□□□□ 0.6
SEC13-209ENST00000397117 BRWD3Q6RI45 1802 aa18.82■□□□□ 0.6
SEC13-209ENST00000397117 DCAF11Q8TEB1 546 aa18.82■□□□□ 0.6
SEC13-209ENST00000397117 YTHDC2Q9H6S0 1430 aaKnown RBP18.81■□□□□ 0.6
SEC13-209ENST00000397117 USP32Q8NFA0 1604 aa18.79■□□□□ 0.6
SEC13-209ENST00000397117 KDM2AQ9Y2K7 1162 aa18.79■□□□□ 0.6
SEC13-209ENST00000397117 C14orf93Q9H972 538 aaKnown RBP18.78■□□□□ 0.6
SEC13-209ENST00000397117 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.6
SEC13-209ENST00000397117 PHF8Q9UPP1 1060 aa18.77■□□□□ 0.6
SEC13-209ENST00000397117 ONECUT3O60422 494 aaPredicted RBP18.75■□□□□ 0.59
SEC13-209ENST00000397117 PSME1Q06323 249 aa18.75■□□□□ 0.59
SEC13-209ENST00000397117 VPS72Q15906 364 aa18.75■□□□□ 0.59
SEC13-209ENST00000397117 TNS3Q68CZ2 1445 aa18.75■□□□□ 0.59
SEC13-209ENST00000397117 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
SEC13-209ENST00000397117 CABLES1Q8TDN4 633 aa18.74■□□□□ 0.59
SEC13-209ENST00000397117 NWD2Q9ULI1 1742 aa18.74■□□□□ 0.59
SEC13-209ENST00000397117 NRXN1Q9ULB1 1477 aa18.74■□□□□ 0.59
SEC13-209ENST00000397117 STAC3Q96MF2 364 aa18.74■□□□□ 0.59
SEC13-209ENST00000397117 PLCH1Q4KWH8 1693 aa18.74■□□□□ 0.59
SEC13-209ENST00000397117 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
SEC13-209ENST00000397117 NBPF8Q3BBV2 869 aa18.73■□□□□ 0.59
SEC13-209ENST00000397117 CFAP70Q5T0N1 1121 aa18.73■□□□□ 0.59
SEC13-209ENST00000397117 ABCA3Q99758 1704 aa18.73■□□□□ 0.59
SEC13-209ENST00000397117 DEFB132Q7Z7B7 95 aa18.72■□□□□ 0.59
SEC13-209ENST00000397117 HAP1P54257 671 aaPredicted RBP18.71■□□□□ 0.58
SEC13-209ENST00000397117 ARHGEF10O15013 1369 aa18.69■□□□□ 0.58
SEC13-209ENST00000397117 FAM83GA6ND36 823 aa18.69■□□□□ 0.58
SEC13-209ENST00000397117 PRAM1Q96QH2 718 aa18.69■□□□□ 0.58
SEC13-209ENST00000397117 SAFB2Q14151 953 aaKnown RBP eCLIP18.67■□□□□ 0.58
SEC13-209ENST00000397117 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
SEC13-209ENST00000397117 DLC1Q96QB1 1528 aa18.67■□□□□ 0.58
SEC13-209ENST00000397117 ANKARQ7Z5J8 1434 aa18.67■□□□□ 0.58
SEC13-209ENST00000397117 PLEKHG5O94827 1062 aa18.67■□□□□ 0.58
SEC13-209ENST00000397117 SF3B2Q13435 895 aaKnown RBP18.67■□□□□ 0.58
SEC13-209ENST00000397117 LMOD2Q6P5Q4 547 aa18.67■□□□□ 0.58
SEC13-209ENST00000397117 PMFBP1Q8TBY8 1022 aa18.66■□□□□ 0.58
SEC13-209ENST00000397117 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
SEC13-209ENST00000397117 TRPM3Q9HCF6 1732 aaPredicted RBP18.65■□□□□ 0.58
SEC13-209ENST00000397117 ZNF316A6NFI3 1004 aaPredicted RBP18.65■□□□□ 0.58
SEC13-209ENST00000397117 NRAPQ86VF7 1730 aa18.64■□□□□ 0.58
SEC13-209ENST00000397117 POGKQ9P215 609 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms