RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 PANK1Q8TE04 598 aa13.17□□□□□ -0.3
FGFR1-209ENST00000397113 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
FGFR1-209ENST00000397113 ADGRL1O94910 1474 aa13.17□□□□□ -0.3
FGFR1-209ENST00000397113 PNNQ9H307 717 aaKnown RBP13.16□□□□□ -0.3
FGFR1-209ENST00000397113 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
FGFR1-209ENST00000397113 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
FGFR1-209ENST00000397113 SEC24BO95487 1268 aa13.15□□□□□ -0.3
FGFR1-209ENST00000397113 C8orf34Q49A92 452 aa13.15□□□□□ -0.3
FGFR1-209ENST00000397113 GLIPR1L2Q4G1C9 344 aa13.15□□□□□ -0.3
FGFR1-209ENST00000397113 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
FGFR1-209ENST00000397113 MYO5BQ9ULV0 1848 aa13.14□□□□□ -0.31
FGFR1-209ENST00000397113 NOS1P29475 1434 aa13.14□□□□□ -0.31
FGFR1-209ENST00000397113 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
FGFR1-209ENST00000397113 HSP90AA1P07900 732 aaKnown RBP13.14□□□□□ -0.31
FGFR1-209ENST00000397113 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
FGFR1-209ENST00000397113 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
FGFR1-209ENST00000397113 NRXN3Q9Y4C0 1643 aa13.12□□□□□ -0.31
FGFR1-209ENST00000397113 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
FGFR1-209ENST00000397113 TMF1P82094 1093 aa13.12□□□□□ -0.31
FGFR1-209ENST00000397113 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-209ENST00000397113 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
FGFR1-209ENST00000397113 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
FGFR1-209ENST00000397113 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
FGFR1-209ENST00000397113 GOLGA6L3A6NEY3 463 aa13.11□□□□□ -0.31
FGFR1-209ENST00000397113 NEXMIFQ5QGS0 1516 aa13.11□□□□□ -0.31
FGFR1-209ENST00000397113 IGHDP01880 384 aa13.1□□□□□ -0.31
FGFR1-209ENST00000397113 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
FGFR1-209ENST00000397113 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
FGFR1-209ENST00000397113 ZFYVE9O95405 1425 aa13.1□□□□□ -0.31
FGFR1-209ENST00000397113 TRIM44Q96DX7 344 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-209ENST00000397113 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
FGFR1-209ENST00000397113 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-209ENST00000397113 A2MP01023 1474 aa13.09□□□□□ -0.31
FGFR1-209ENST00000397113 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
FGFR1-209ENST00000397113 L1TD1Q5T7N2 865 aaKnown RBP13.08□□□□□ -0.32
FGFR1-209ENST00000397113 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
FGFR1-209ENST00000397113 SPINK5Q9NQ38 1064 aaPredicted RBP13.07□□□□□ -0.32
FGFR1-209ENST00000397113 ADGRB1O14514 1584 aa13.07□□□□□ -0.32
FGFR1-209ENST00000397113 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
FGFR1-209ENST00000397113 FER1L4A9Z1Z3 1794 aa13.06□□□□□ -0.32
FGFR1-209ENST00000397113 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
FGFR1-209ENST00000397113 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
FGFR1-209ENST00000397113 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
FGFR1-209ENST00000397113 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
FGFR1-209ENST00000397113 TPRNQ4KMQ1 711 aa13.05□□□□□ -0.32
FGFR1-209ENST00000397113 C3P01024 1663 aa13.04□□□□□ -0.32
FGFR1-209ENST00000397113 ADGRB2O60241 1585 aa13.04□□□□□ -0.32
FGFR1-209ENST00000397113 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
FGFR1-209ENST00000397113 TOPAZ1Q8N9V7 1692 aa13.04□□□□□ -0.32
FGFR1-209ENST00000397113 TNNQ9UQP3 1299 aa13.04□□□□□ -0.32
FGFR1-209ENST00000397113 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
FGFR1-209ENST00000397113 CENPJQ9HC77 1338 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-209ENST00000397113 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
FGFR1-209ENST00000397113 MYH16Q9H6N6 1097 aa13.02□□□□□ -0.32
FGFR1-209ENST00000397113 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
FGFR1-209ENST00000397113 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
FGFR1-209ENST00000397113 KDM2BQ8NHM5 1336 aa13.01□□□□□ -0.33
FGFR1-209ENST00000397113 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
FGFR1-209ENST00000397113 XRCC6P12956 609 aaKnown RBP eCLIP13.01□□□□□ -0.33
FGFR1-209ENST00000397113 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
FGFR1-209ENST00000397113 DIP2AQ14689 1571 aa13□□□□□ -0.33
FGFR1-209ENST00000397113 ZMYND15Q9H091 742 aa13□□□□□ -0.33
FGFR1-209ENST00000397113 TBC1D2Q9BYX2 928 aa13□□□□□ -0.33
FGFR1-209ENST00000397113 TRAK2O60296 914 aa12.99□□□□□ -0.33
FGFR1-209ENST00000397113 PDZRN3Q9UPQ7 1066 aa12.98□□□□□ -0.33
FGFR1-209ENST00000397113 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
FGFR1-209ENST00000397113 SLFN5Q08AF3 891 aa12.98□□□□□ -0.33
FGFR1-209ENST00000397113 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
FGFR1-209ENST00000397113 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
FGFR1-209ENST00000397113 STAC3Q96MF2 364 aa12.97□□□□□ -0.33
FGFR1-209ENST00000397113 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.33
FGFR1-209ENST00000397113 ASXL1Q8IXJ9 1541 aa12.96□□□□□ -0.34
FGFR1-209ENST00000397113 LRRC7Q96NW7 1537 aa12.96□□□□□ -0.34
FGFR1-209ENST00000397113 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.34
FGFR1-209ENST00000397113 MCM4P33991 863 aa12.95□□□□□ -0.34
FGFR1-209ENST00000397113 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
FGFR1-209ENST00000397113 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
FGFR1-209ENST00000397113 ANP32BQ92688 251 aaKnown RBP12.95□□□□□ -0.34
FGFR1-209ENST00000397113 TSPOAP1O95153 1857 aa12.95□□□□□ -0.34
FGFR1-209ENST00000397113 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
FGFR1-209ENST00000397113 CPS1P31327 1500 aa12.94□□□□□ -0.34
FGFR1-209ENST00000397113 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
FGFR1-209ENST00000397113 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
FGFR1-209ENST00000397113 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
FGFR1-209ENST00000397113 SLIT1O75093 1534 aa12.94□□□□□ -0.34
FGFR1-209ENST00000397113 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
FGFR1-209ENST00000397113 E9PSI1 815 aa12.94□□□□□ -0.34
FGFR1-209ENST00000397113 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
FGFR1-209ENST00000397113 C22orf23Q9BZE7 217 aa12.94□□□□□ -0.34
FGFR1-209ENST00000397113 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
FGFR1-209ENST00000397113 NRKQ7Z2Y5 1582 aa12.93□□□□□ -0.34
FGFR1-209ENST00000397113 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
FGFR1-209ENST00000397113 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
FGFR1-209ENST00000397113 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
FGFR1-209ENST00000397113 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
FGFR1-209ENST00000397113 INSRP06213 1382 aa12.92□□□□□ -0.34
FGFR1-209ENST00000397113 RLBP1P12271 317 aa12.92□□□□□ -0.34
FGFR1-209ENST00000397113 FOXD4L5Q5VV16 416 aaPredicted RBP12.92□□□□□ -0.34
FGFR1-209ENST00000397113 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
FGFR1-209ENST00000397113 FOXD4L4Q8WXT5 416 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms