RNA–Protein interactions for RNA: ENST00000397085.3

RAPGEF4-202, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-202ENST00000397085 DACH1Q9UI36 760 aa11.06□□□□□ -0.64
RAPGEF4-202ENST00000397085 SMCPP49901 116 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF4-202ENST00000397085 SNIP1Q8TAD8 396 aaKnown RBP11.05□□□□□ -0.64
RAPGEF4-202ENST00000397085 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
RAPGEF4-202ENST00000397085 WNT7AO00755 349 aa11.04□□□□□ -0.64
RAPGEF4-202ENST00000397085 WFS1O76024 890 aa11.03□□□□□ -0.64
RAPGEF4-202ENST00000397085 PLCB2Q00722 1185 aa11.02□□□□□ -0.65
RAPGEF4-202ENST00000397085 TRIM32Q13049 653 aa11.02□□□□□ -0.65
RAPGEF4-202ENST00000397085 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
RAPGEF4-202ENST00000397085 REPIN1Q9BWE0 567 aaKnown RBP11.01□□□□□ -0.65
RAPGEF4-202ENST00000397085 KDM4AO75164 1064 aa11□□□□□ -0.65
RAPGEF4-202ENST00000397085 MMP16P51512 607 aa11□□□□□ -0.65
RAPGEF4-202ENST00000397085 USB1Q9BQ65 265 aaKnown RBP11□□□□□ -0.65
RAPGEF4-202ENST00000397085 CCDC24Q8N4L8 307 aa10.99□□□□□ -0.65
RAPGEF4-202ENST00000397085 CD46P15529 392 aa10.98□□□□□ -0.65
RAPGEF4-202ENST00000397085 USP46P62068 366 aa10.98□□□□□ -0.65
RAPGEF4-202ENST00000397085 MRGPRX2Q96LB1 330 aa10.98□□□□□ -0.65
RAPGEF4-202ENST00000397085 SENP2Q9HC62 589 aa10.98□□□□□ -0.65
RAPGEF4-202ENST00000397085 SMPD1P17405 629 aa10.97□□□□□ -0.65
RAPGEF4-202ENST00000397085 MAP2K5Q13163 448 aa10.96□□□□□ -0.65
RAPGEF4-202ENST00000397085 LCE2AQ5TA79 106 aaPredicted RBP10.96□□□□□ -0.65
RAPGEF4-202ENST00000397085 ATP13A2Q9NQ11 1180 aa10.96□□□□□ -0.65
RAPGEF4-202ENST00000397085 DXOO77932 396 aaKnown RBP10.95□□□□□ -0.66
RAPGEF4-202ENST00000397085 J3QL48 77 aa10.93□□□□□ -0.66
RAPGEF4-202ENST00000397085 INSM1Q01101 510 aaPredicted RBP10.93□□□□□ -0.66
RAPGEF4-202ENST00000397085 MDM2Q00987 491 aaPredicted RBP10.92□□□□□ -0.66
RAPGEF4-202ENST00000397085 KIFC2Q96AC6 838 aa10.92□□□□□ -0.66
RAPGEF4-202ENST00000397085 HAP1P54257 671 aaPredicted RBP10.91□□□□□ -0.66
RAPGEF4-202ENST00000397085 WNT7BP56706 349 aa10.91□□□□□ -0.66
RAPGEF4-202ENST00000397085 RC3H1Q5TC82 1133 aaKnown RBP10.91□□□□□ -0.66
RAPGEF4-202ENST00000397085 NFX1Q12986 1120 aaKnown RBP10.9□□□□□ -0.66
RAPGEF4-202ENST00000397085 IRF6O14896 467 aa10.89□□□□□ -0.67
RAPGEF4-202ENST00000397085 KRI1Q8N9T8 703 aaKnown RBP10.89□□□□□ -0.67
RAPGEF4-202ENST00000397085 HPS1Q92902 700 aa10.89□□□□□ -0.67
RAPGEF4-202ENST00000397085 TRIM47Q96LD4 638 aa10.89□□□□□ -0.67
RAPGEF4-202ENST00000397085 STK17AQ9UEE5 414 aa10.89□□□□□ -0.67
RAPGEF4-202ENST00000397085 MINK1Q8N4C8 1332 aaPredicted RBP10.88□□□□□ -0.67
RAPGEF4-202ENST00000397085 HOXA2O43364 376 aa10.88□□□□□ -0.67
RAPGEF4-202ENST00000397085 SNRPBP14678 240 aaKnown RBP10.88□□□□□ -0.67
RAPGEF4-202ENST00000397085 JUNDP17535 347 aa10.87□□□□□ -0.67
RAPGEF4-202ENST00000397085 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
RAPGEF4-202ENST00000397085 TERTO14746 1132 aaKnown RBP10.86□□□□□ -0.67
RAPGEF4-202ENST00000397085 WIPF1O43516 503 aa10.86□□□□□ -0.67
RAPGEF4-202ENST00000397085 ALDH1A1P00352 501 aa10.86□□□□□ -0.67
RAPGEF4-202ENST00000397085 HLA-CQ95604 372 aa10.86□□□□□ -0.67
RAPGEF4-202ENST00000397085 CLCN1P35523 988 aa10.85□□□□□ -0.67
RAPGEF4-202ENST00000397085 GPCPD1Q9NPB8 672 aa10.85□□□□□ -0.67
RAPGEF4-202ENST00000397085 SKOR1P84550 965 aa10.84□□□□□ -0.67
RAPGEF4-202ENST00000397085 EHBP1Q8NDI1 1231 aa10.83□□□□□ -0.68
RAPGEF4-202ENST00000397085 SLC16A10Q8TF71 515 aa10.83□□□□□ -0.68
RAPGEF4-202ENST00000397085 NUDT12Q9BQG2 462 aa10.83□□□□□ -0.68
RAPGEF4-202ENST00000397085 GUCA2AQ02747 115 aa10.82□□□□□ -0.68
RAPGEF4-202ENST00000397085 RETREG3Q86VR2 466 aa10.82□□□□□ -0.68
RAPGEF4-202ENST00000397085 CCDC102AQ96A19 550 aa10.82□□□□□ -0.68
RAPGEF4-202ENST00000397085 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
RAPGEF4-202ENST00000397085 SYMPKQ92797 1274 aaKnown RBP10.8□□□□□ -0.68
RAPGEF4-202ENST00000397085 C6orf229H3BNL8 230 aa10.79□□□□□ -0.68
RAPGEF4-202ENST00000397085 FAM217BQ9NTX9 383 aaPredicted RBP10.79□□□□□ -0.68
RAPGEF4-202ENST00000397085 FAM181BA6NEQ2 426 aa10.77□□□□□ -0.69
RAPGEF4-202ENST00000397085 CAPN5O15484 640 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF4-202ENST00000397085 FDX1P10109 184 aa10.76□□□□□ -0.69
RAPGEF4-202ENST00000397085 MS4A1P11836 297 aa10.76□□□□□ -0.69
RAPGEF4-202ENST00000397085 CCNYL3P0C7X3 344 aa10.75□□□□□ -0.69
RAPGEF4-202ENST00000397085 KDM2AQ9Y2K7 1162 aa10.75□□□□□ -0.69
RAPGEF4-202ENST00000397085 PTCRAQ6ISU1 281 aaPredicted RBP10.74□□□□□ -0.69
RAPGEF4-202ENST00000397085 NXF1Q9UBU9 619 aaKnown RBP10.74□□□□□ -0.69
RAPGEF4-202ENST00000397085 SIAH2O43255 324 aa10.73□□□□□ -0.69
RAPGEF4-202ENST00000397085 BMP1P13497 986 aa10.71□□□□□ -0.69
RAPGEF4-202ENST00000397085 PLEKHG3A1L390 1219 aa10.7□□□□□ -0.7
RAPGEF4-202ENST00000397085 SH3BP2P78314 561 aa10.7□□□□□ -0.7
RAPGEF4-202ENST00000397085 PTPRNQ16849 979 aa10.7□□□□□ -0.7
RAPGEF4-202ENST00000397085 IRF7Q92985 503 aa10.7□□□□□ -0.7
RAPGEF4-202ENST00000397085 NPAS3Q8IXF0 933 aa10.69□□□□□ -0.7
RAPGEF4-202ENST00000397085 UNC93B1Q9H1C4 597 aa10.69□□□□□ -0.7
RAPGEF4-202ENST00000397085 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
RAPGEF4-202ENST00000397085 SSTR3P32745 418 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF4-202ENST00000397085 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
RAPGEF4-202ENST00000397085 TRIM46Q7Z4K8 759 aa10.68□□□□□ -0.7
RAPGEF4-202ENST00000397085 LINC01559Q495D7 138 aa10.67□□□□□ -0.7
RAPGEF4-202ENST00000397085 EVA1BQ9NVM1 165 aa10.67□□□□□ -0.7
RAPGEF4-202ENST00000397085 VARSP26640 1264 aaKnown RBP10.66□□□□□ -0.7
RAPGEF4-202ENST00000397085 KCNH2Q12809 1159 aa10.66□□□□□ -0.7
RAPGEF4-202ENST00000397085 TTLL12Q14166 644 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-202ENST00000397085 SPIRE2Q8WWL2 714 aa10.66□□□□□ -0.7
RAPGEF4-202ENST00000397085 BAP1Q92560 729 aa10.66□□□□□ -0.7
RAPGEF4-202ENST00000397085 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
RAPGEF4-202ENST00000397085 SCARF1Q14162 830 aa10.65□□□□□ -0.7
RAPGEF4-202ENST00000397085 VSIG10Q8N0Z9 540 aa10.65□□□□□ -0.7
RAPGEF4-202ENST00000397085 PRR7Q8TB68 274 aa10.65□□□□□ -0.7
RAPGEF4-202ENST00000397085 NDUFV2P19404 249 aa10.64□□□□□ -0.71
RAPGEF4-202ENST00000397085 GMPRP36959 345 aa10.64□□□□□ -0.71
RAPGEF4-202ENST00000397085 MTMR2Q13614 643 aa10.64□□□□□ -0.71
RAPGEF4-202ENST00000397085 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
RAPGEF4-202ENST00000397085 ZNF511Q8NB15 262 aa10.63□□□□□ -0.71
RAPGEF4-202ENST00000397085 ZSCAN1Q8NBB4 408 aa10.63□□□□□ -0.71
RAPGEF4-202ENST00000397085 ZFP42Q96MM3 310 aa10.63□□□□□ -0.71
RAPGEF4-202ENST00000397085 MOXD2PA6NHM9 499 aa10.62□□□□□ -0.71
RAPGEF4-202ENST00000397085 VEGFBP49765 207 aa10.62□□□□□ -0.71
RAPGEF4-202ENST00000397085 NNTQ13423 1086 aa10.62□□□□□ -0.71
RAPGEF4-202ENST00000397085 CTHP32929 405 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms