RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCNF-202ENST00000397066 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
CCNF-202ENST00000397066 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
CCNF-202ENST00000397066 NAP1L5Q96NT1 182 aaPredicted RBP18.63■□□□□ 0.57
CCNF-202ENST00000397066 TMEM132EQ6IEE7 984 aa18.62■□□□□ 0.57
CCNF-202ENST00000397066 TSR2Q969E8 191 aaKnown RBP18.61■□□□□ 0.57
CCNF-202ENST00000397066 PLCH2O75038 1416 aa18.61■□□□□ 0.57
CCNF-202ENST00000397066 MVPQ14764 893 aaKnown RBP18.61■□□□□ 0.57
CCNF-202ENST00000397066 POLR3AO14802 1390 aaPredicted RBP18.6■□□□□ 0.57
CCNF-202ENST00000397066 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
CCNF-202ENST00000397066 CHMP5Q9NZZ3 219 aa18.6■□□□□ 0.57
CCNF-202ENST00000397066 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
CCNF-202ENST00000397066 MCM4P33991 863 aa18.58■□□□□ 0.57
CCNF-202ENST00000397066 PLXNC1O60486 1568 aa18.57■□□□□ 0.56
CCNF-202ENST00000397066 MADDQ8WXG6 1647 aa18.57■□□□□ 0.56
CCNF-202ENST00000397066 HSP90AB1P08238 724 aaKnown RBP18.57■□□□□ 0.56
CCNF-202ENST00000397066 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
CCNF-202ENST00000397066 GGT6Q6P531 493 aa18.57■□□□□ 0.56
CCNF-202ENST00000397066 PNNQ9H307 717 aaKnown RBP18.57■□□□□ 0.56
CCNF-202ENST00000397066 TRAK2O60296 914 aa18.56■□□□□ 0.56
CCNF-202ENST00000397066 DDX19BQ9UMR2 479 aa18.55■□□□□ 0.56
CCNF-202ENST00000397066 KDM5AP29375 1690 aaKnown RBP18.55■□□□□ 0.56
CCNF-202ENST00000397066 ERVK-7P63135 1459 aa18.54■□□□□ 0.56
CCNF-202ENST00000397066 RNF17Q9BXT8 1623 aaKnown RBP18.54■□□□□ 0.56
CCNF-202ENST00000397066 ANTXR1Q9H6X2 564 aa18.54■□□□□ 0.56
CCNF-202ENST00000397066 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
CCNF-202ENST00000397066 TRIM44Q96DX7 344 aaPredicted RBP18.53■□□□□ 0.56
CCNF-202ENST00000397066 XRCC6P12956 609 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCNF-202ENST00000397066 RRAGDQ9NQL2 400 aaPredicted RBP18.52■□□□□ 0.56
CCNF-202ENST00000397066 FOXD4L1Q9NU39 408 aa18.52■□□□□ 0.56
CCNF-202ENST00000397066 STK26Q9P289 416 aa18.52■□□□□ 0.56
CCNF-202ENST00000397066 TRPM2O94759 1503 aa18.52■□□□□ 0.55
CCNF-202ENST00000397066 IPO8O15397 1037 aaKnown RBP18.51■□□□□ 0.55
CCNF-202ENST00000397066 LNPKQ9C0E8 428 aa18.51■□□□□ 0.55
CCNF-202ENST00000397066 DDX11L8A8MPP1 907 aa18.51■□□□□ 0.55
CCNF-202ENST00000397066 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
CCNF-202ENST00000397066 NOB1Q9ULX3 412 aaKnown RBP18.51■□□□□ 0.55
CCNF-202ENST00000397066 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
CCNF-202ENST00000397066 EVC2Q86UK5 1308 aa18.5■□□□□ 0.55
CCNF-202ENST00000397066 PANK2Q9BZ23 570 aa18.5■□□□□ 0.55
CCNF-202ENST00000397066 TRIM27P14373 513 aa18.49■□□□□ 0.55
CCNF-202ENST00000397066 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
CCNF-202ENST00000397066 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
CCNF-202ENST00000397066 PTPRTO14522 1441 aa18.49■□□□□ 0.55
CCNF-202ENST00000397066 NOS1P29475 1434 aa18.49■□□□□ 0.55
CCNF-202ENST00000397066 ATF7IPQ6VMQ6 1270 aa18.49■□□□□ 0.55
CCNF-202ENST00000397066 RIPK4P57078 832 aa18.48■□□□□ 0.55
CCNF-202ENST00000397066 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
CCNF-202ENST00000397066 CLTCL1P53675 1640 aa18.47■□□□□ 0.55
CCNF-202ENST00000397066 MRE11P49959 708 aa18.47■□□□□ 0.55
CCNF-202ENST00000397066 GBP4Q96PP9 640 aa18.47■□□□□ 0.55
CCNF-202ENST00000397066 TMEM57Q8N5G2 664 aa18.46■□□□□ 0.55
CCNF-202ENST00000397066 UGGT1Q9NYU2 1555 aa18.45■□□□□ 0.54
CCNF-202ENST00000397066 ANKRD45Q5TZF3 282 aa18.45■□□□□ 0.54
CCNF-202ENST00000397066 ANP32BQ92688 251 aaKnown RBP18.45■□□□□ 0.54
CCNF-202ENST00000397066 TMPOP42166 694 aaKnown RBP18.45■□□□□ 0.54
CCNF-202ENST00000397066 CT47B1P0C2W7 299 aaPredicted RBP18.44■□□□□ 0.54
CCNF-202ENST00000397066 GLIPR1L2Q4G1C9 344 aa18.44■□□□□ 0.54
CCNF-202ENST00000397066 RTEL1-TNFRSF6BF6WH68 1400 aa18.44■□□□□ 0.54
CCNF-202ENST00000397066 GOLGA6L22H0YM25 854 aa18.43■□□□□ 0.54
CCNF-202ENST00000397066 ABCC1P33527 1531 aa18.43■□□□□ 0.54
CCNF-202ENST00000397066 UBE2Q2Q8WVN8 375 aa18.43■□□□□ 0.54
CCNF-202ENST00000397066 C14orf93Q9H972 538 aaKnown RBP18.43■□□□□ 0.54
CCNF-202ENST00000397066 GRPEL1Q9HAV7 217 aa18.43■□□□□ 0.54
CCNF-202ENST00000397066 HDAC1Q13547 482 aaPredicted RBP18.42■□□□□ 0.54
CCNF-202ENST00000397066 SPHKAPQ2M3C7 1700 aa18.42■□□□□ 0.54
CCNF-202ENST00000397066 KIF16BQ96L93 1317 aa18.42■□□□□ 0.54
CCNF-202ENST00000397066 ELL2O00472 640 aaPredicted RBP18.4■□□□□ 0.54
CCNF-202ENST00000397066 NCLP19338 710 aaKnown RBP18.4■□□□□ 0.54
CCNF-202ENST00000397066 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
CCNF-202ENST00000397066 MYOM1P52179 1685 aa18.4■□□□□ 0.54
CCNF-202ENST00000397066 NLRP1Q9C000 1473 aa18.4■□□□□ 0.54
CCNF-202ENST00000397066 ZMYM3Q14202 1370 aa18.4■□□□□ 0.54
CCNF-202ENST00000397066 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
CCNF-202ENST00000397066 C1orf115Q9H7X2 142 aa18.39■□□□□ 0.53
CCNF-202ENST00000397066 TERF2IPQ9NYB0 399 aa18.39■□□□□ 0.53
CCNF-202ENST00000397066 CHD1LQ86WJ1 897 aa18.39■□□□□ 0.53
CCNF-202ENST00000397066 VGFO15240 615 aaPredicted RBP18.38■□□□□ 0.53
CCNF-202ENST00000397066 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
CCNF-202ENST00000397066 FANCAO15360 1455 aa18.38■□□□□ 0.53
CCNF-202ENST00000397066 MINK1Q8N4C8 1332 aaPredicted RBP18.38■□□□□ 0.53
CCNF-202ENST00000397066 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
CCNF-202ENST00000397066 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
CCNF-202ENST00000397066 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
CCNF-202ENST00000397066 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
CCNF-202ENST00000397066 CEP152O94986 1710 aa18.37■□□□□ 0.53
CCNF-202ENST00000397066 ADGRL1O94910 1474 aa18.36■□□□□ 0.53
CCNF-202ENST00000397066 FSD2A1L4K1 749 aa18.36■□□□□ 0.53
CCNF-202ENST00000397066 MYOM2P54296 1465 aa18.36■□□□□ 0.53
CCNF-202ENST00000397066 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
CCNF-202ENST00000397066 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCNF-202ENST00000397066 SKOR2Q2VWA4 1001 aaPredicted RBP18.35■□□□□ 0.53
CCNF-202ENST00000397066 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
CCNF-202ENST00000397066 MAP3K4Q9Y6R4 1608 aa18.35■□□□□ 0.53
CCNF-202ENST00000397066 ZFYVE16Q7Z3T8 1539 aa18.35■□□□□ 0.53
CCNF-202ENST00000397066 ZBTB40Q9NUA8 1239 aa18.35■□□□□ 0.53
CCNF-202ENST00000397066 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
CCNF-202ENST00000397066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCNF-202ENST00000397066 ABCA6Q8N139 1617 aa18.34■□□□□ 0.53
CCNF-202ENST00000397066 CLCN1P35523 988 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms