RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
TM9SF1-202ENST00000396854 POGKQ9P215 609 aa20.63■□□□□ 0.89
TM9SF1-202ENST00000396854 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
TM9SF1-202ENST00000396854 ADGRB2O60241 1585 aa20.63■□□□□ 0.89
TM9SF1-202ENST00000396854 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.63■□□□□ 0.89
TM9SF1-202ENST00000396854 TULP4Q9NRJ4 1543 aa20.61■□□□□ 0.89
TM9SF1-202ENST00000396854 C11orf95C9JLR9 678 aaPredicted RBP20.61■□□□□ 0.89
TM9SF1-202ENST00000396854 WAPLQ7Z5K2 1190 aa20.61■□□□□ 0.89
TM9SF1-202ENST00000396854 DISP3Q9P2K9 1392 aa20.61■□□□□ 0.89
TM9SF1-202ENST00000396854 TMF1P82094 1093 aa20.6■□□□□ 0.89
TM9SF1-202ENST00000396854 CCDC7Q96M83 1385 aa20.6■□□□□ 0.89
TM9SF1-202ENST00000396854 WASHC2AQ641Q2 1341 aa20.59■□□□□ 0.89
TM9SF1-202ENST00000396854 NALCNQ8IZF0 1738 aa20.58■□□□□ 0.89
TM9SF1-202ENST00000396854 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
TM9SF1-202ENST00000396854 SAFB2Q14151 953 aaKnown RBP eCLIP20.58■□□□□ 0.88
TM9SF1-202ENST00000396854 MINK1Q8N4C8 1332 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-202ENST00000396854 CDCA8Q53HL2 280 aa20.55■□□□□ 0.88
TM9SF1-202ENST00000396854 EVC2Q86UK5 1308 aa20.55■□□□□ 0.88
TM9SF1-202ENST00000396854 MYOM1P52179 1685 aa20.54■□□□□ 0.88
TM9SF1-202ENST00000396854 XIRP1Q702N8 1843 aaKnown RBP20.54■□□□□ 0.88
TM9SF1-202ENST00000396854 CDC42BPGQ6DT37 1551 aa20.52■□□□□ 0.88
TM9SF1-202ENST00000396854 PUS7Q96PZ0 661 aaKnown RBP20.52■□□□□ 0.88
TM9SF1-202ENST00000396854 ADGRL3Q9HAR2 1447 aa20.51■□□□□ 0.87
TM9SF1-202ENST00000396854 NCOA3Q9Y6Q9 1424 aa20.51■□□□□ 0.87
TM9SF1-202ENST00000396854 ZNF335Q9H4Z2 1342 aaPredicted RBP20.51■□□□□ 0.87
TM9SF1-202ENST00000396854 FMN2Q9NZ56 1722 aa20.5■□□□□ 0.87
TM9SF1-202ENST00000396854 WASLO00401 505 aaPredicted RBP20.49■□□□□ 0.87
TM9SF1-202ENST00000396854 PROSER2Q86WR7 435 aaPredicted RBP20.48■□□□□ 0.87
TM9SF1-202ENST00000396854 LRRC7Q96NW7 1537 aa20.48■□□□□ 0.87
TM9SF1-202ENST00000396854 CDK19Q9BWU1 502 aa20.47■□□□□ 0.87
TM9SF1-202ENST00000396854 TOPAZ1Q8N9V7 1692 aa20.47■□□□□ 0.87
TM9SF1-202ENST00000396854 USP32Q8NFA0 1604 aa20.46■□□□□ 0.87
TM9SF1-202ENST00000396854 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
TM9SF1-202ENST00000396854 ATAD2Q6PL18 1390 aa20.46■□□□□ 0.87
TM9SF1-202ENST00000396854 ITSN1Q15811 1721 aa20.46■□□□□ 0.87
TM9SF1-202ENST00000396854 LTBP4Q8N2S1 1624 aa20.45■□□□□ 0.86
TM9SF1-202ENST00000396854 POLR3GLQ9BT43 218 aa20.45■□□□□ 0.86
TM9SF1-202ENST00000396854 ATP7BP35670 1465 aa20.45■□□□□ 0.86
TM9SF1-202ENST00000396854 SRPK2P78362 688 aaKnown RBP20.44■□□□□ 0.86
TM9SF1-202ENST00000396854 CABP2Q9NPB3 220 aa20.44■□□□□ 0.86
TM9SF1-202ENST00000396854 RGPD8O14715 1765 aaPredicted RBP20.44■□□□□ 0.86
TM9SF1-202ENST00000396854 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
TM9SF1-202ENST00000396854 NINLQ9Y2I6 1382 aa20.43■□□□□ 0.86
TM9SF1-202ENST00000396854 DDX10Q13206 875 aaKnown RBP20.42■□□□□ 0.86
TM9SF1-202ENST00000396854 DCCP43146 1447 aa20.42■□□□□ 0.86
TM9SF1-202ENST00000396854 ANKARQ7Z5J8 1434 aa20.41■□□□□ 0.86
TM9SF1-202ENST00000396854 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.86
TM9SF1-202ENST00000396854 C14orf37Q86TY3 774 aa20.39■□□□□ 0.85
TM9SF1-202ENST00000396854 PRR36Q9H6K5 1346 aa20.39■□□□□ 0.85
TM9SF1-202ENST00000396854 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
TM9SF1-202ENST00000396854 AKAP12Q02952 1782 aa20.37■□□□□ 0.85
TM9SF1-202ENST00000396854 MSH6P52701 1360 aa20.36■□□□□ 0.85
TM9SF1-202ENST00000396854 PPIP5K1Q6PFW1 1433 aa20.36■□□□□ 0.85
TM9SF1-202ENST00000396854 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
TM9SF1-202ENST00000396854 CD163L1Q9NR16 1453 aa20.35■□□□□ 0.85
TM9SF1-202ENST00000396854 SLC12A5Q9H2X9 1139 aa20.34■□□□□ 0.85
TM9SF1-202ENST00000396854 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
TM9SF1-202ENST00000396854 TMC1Q8TDI8 760 aa20.34■□□□□ 0.85
TM9SF1-202ENST00000396854 MON2Q7Z3U7 1717 aa20.34■□□□□ 0.85
TM9SF1-202ENST00000396854 PANK3Q9H999 370 aa20.33■□□□□ 0.84
TM9SF1-202ENST00000396854 MST1RQ04912 1400 aa20.32■□□□□ 0.84
TM9SF1-202ENST00000396854 CABP1Q9NZU7 370 aa20.31■□□□□ 0.84
TM9SF1-202ENST00000396854 NUTM2FA1L443 756 aa20.31■□□□□ 0.84
TM9SF1-202ENST00000396854 CADPS2Q86UW7 1296 aa20.31■□□□□ 0.84
TM9SF1-202ENST00000396854 KIF1AQ12756 1690 aa20.3■□□□□ 0.84
TM9SF1-202ENST00000396854 CPSF1Q10570 1443 aaKnown RBP20.3■□□□□ 0.84
TM9SF1-202ENST00000396854 ATF3P18847 181 aa20.3■□□□□ 0.84
TM9SF1-202ENST00000396854 A0A1W2PP64 1363 aa20.3■□□□□ 0.84
TM9SF1-202ENST00000396854 PLEKHG3A1L390 1219 aa20.3■□□□□ 0.84
TM9SF1-202ENST00000396854 C1orf167Q5SNV9 1468 aa20.29■□□□□ 0.84
TM9SF1-202ENST00000396854 PER1O15534 1290 aaPredicted RBP20.29■□□□□ 0.84
TM9SF1-202ENST00000396854 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
TM9SF1-202ENST00000396854 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
TM9SF1-202ENST00000396854 POLR3AO14802 1390 aaPredicted RBP20.27■□□□□ 0.84
TM9SF1-202ENST00000396854 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
TM9SF1-202ENST00000396854 HDGFL2Q7Z4V5 671 aaPredicted RBP20.25■□□□□ 0.83
TM9SF1-202ENST00000396854 CARD14Q9BXL6 1004 aa20.25■□□□□ 0.83
TM9SF1-202ENST00000396854 NSD3Q9BZ95 1437 aa20.25■□□□□ 0.83
TM9SF1-202ENST00000396854 IQSEC2Q5JU85 1478 aa20.25■□□□□ 0.83
TM9SF1-202ENST00000396854 KIF20BQ96Q89 1820 aa20.24■□□□□ 0.83
TM9SF1-202ENST00000396854 ACEP12821 1306 aa20.24■□□□□ 0.83
TM9SF1-202ENST00000396854 ZNF692Q9BU19 519 aaPredicted RBP20.23■□□□□ 0.83
TM9SF1-202ENST00000396854 PHF8Q9UPP1 1060 aa20.23■□□□□ 0.83
TM9SF1-202ENST00000396854 KNSTRNQ9Y448 316 aa20.22■□□□□ 0.83
TM9SF1-202ENST00000396854 KTN1Q86UP2 1357 aaKnown RBP20.22■□□□□ 0.83
TM9SF1-202ENST00000396854 EDC4Q6P2E9 1401 aaKnown RBP20.22■□□□□ 0.83
TM9SF1-202ENST00000396854 ANKRD26Q9UPS8 1709 aa20.22■□□□□ 0.83
TM9SF1-202ENST00000396854 ESCO1Q5FWF5 840 aa20.22■□□□□ 0.83
TM9SF1-202ENST00000396854 PMFBP1Q8TBY8 1022 aa20.22■□□□□ 0.83
TM9SF1-202ENST00000396854 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
TM9SF1-202ENST00000396854 USP6P35125 1406 aa20.22■□□□□ 0.83
TM9SF1-202ENST00000396854 ANP32CO43423 234 aa20.2■□□□□ 0.82
TM9SF1-202ENST00000396854 ORAI2Q96SN7 254 aa20.2■□□□□ 0.82
TM9SF1-202ENST00000396854 CCER2I3L3R5 266 aa20.2■□□□□ 0.82
TM9SF1-202ENST00000396854 SSH2Q76I76 1423 aa20.19■□□□□ 0.82
TM9SF1-202ENST00000396854 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
TM9SF1-202ENST00000396854 NGDNQ8NEJ9 315 aaKnown RBP20.18■□□□□ 0.82
TM9SF1-202ENST00000396854 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
TM9SF1-202ENST00000396854 BRD4O60885 1362 aaPredicted RBP20.18■□□□□ 0.82
TM9SF1-202ENST00000396854 TRPM3Q9HCF6 1732 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms