RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 APAF1O14727 1248 aa21.85■■□□□ 1.09
TRIM39-205ENST00000396551 REREQ9P2R6 1566 aa21.85■■□□□ 1.09
TRIM39-205ENST00000396551 EVC2Q86UK5 1308 aa21.84■■□□□ 1.09
TRIM39-205ENST00000396551 PUS7Q96PZ0 661 aaKnown RBP21.84■■□□□ 1.09
TRIM39-205ENST00000396551 SLFN5Q08AF3 891 aa21.84■■□□□ 1.09
TRIM39-205ENST00000396551 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
TRIM39-205ENST00000396551 MORC1Q86VD1 984 aa21.84■■□□□ 1.09
TRIM39-205ENST00000396551 TRMT2AQ8IZ69 625 aaKnown RBP21.82■■□□□ 1.08
TRIM39-205ENST00000396551 CRBNQ96SW2 442 aa21.82■■□□□ 1.08
TRIM39-205ENST00000396551 AGLP35573 1532 aa21.81■■□□□ 1.08
TRIM39-205ENST00000396551 SPINK5Q9NQ38 1064 aaPredicted RBP21.81■■□□□ 1.08
TRIM39-205ENST00000396551 PTPRMP28827 1452 aa21.81■■□□□ 1.08
TRIM39-205ENST00000396551 CLTCQ00610 1675 aaKnown RBP21.81■■□□□ 1.08
TRIM39-205ENST00000396551 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
TRIM39-205ENST00000396551 SAFB2Q14151 953 aaKnown RBP eCLIP21.8■■□□□ 1.08
TRIM39-205ENST00000396551 CABP2Q9NPB3 220 aa21.8■■□□□ 1.08
TRIM39-205ENST00000396551 TNNT2P45379 298 aaPredicted RBP21.8■■□□□ 1.08
TRIM39-205ENST00000396551 C20orf194Q5TEA3 1177 aa21.8■■□□□ 1.08
TRIM39-205ENST00000396551 STK26Q9P289 416 aa21.8■■□□□ 1.08
TRIM39-205ENST00000396551 CGNL1Q0VF96 1302 aa21.78■■□□□ 1.08
TRIM39-205ENST00000396551 DMRT2Q9Y5R5 561 aa21.77■■□□□ 1.08
TRIM39-205ENST00000396551 ALKQ9UM73 1620 aa21.77■■□□□ 1.08
TRIM39-205ENST00000396551 YTHDC2Q9H6S0 1430 aaKnown RBP21.76■■□□□ 1.07
TRIM39-205ENST00000396551 ERICH6Q7L0X2 663 aa21.74■■□□□ 1.07
TRIM39-205ENST00000396551 NKTRP30414 1462 aaKnown RBP21.74■■□□□ 1.07
TRIM39-205ENST00000396551 SPATA31D1Q6ZQQ2 1576 aa21.73■■□□□ 1.07
TRIM39-205ENST00000396551 MTHFSP49914 203 aa21.73■■□□□ 1.07
TRIM39-205ENST00000396551 NSD2O96028 1365 aa21.73■■□□□ 1.07
TRIM39-205ENST00000396551 A0A1W2PP64 1363 aa21.72■■□□□ 1.07
TRIM39-205ENST00000396551 IQSEC2Q5JU85 1478 aa21.72■■□□□ 1.07
TRIM39-205ENST00000396551 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
TRIM39-205ENST00000396551 PRAM1Q96QH2 718 aa21.72■■□□□ 1.07
TRIM39-205ENST00000396551 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
TRIM39-205ENST00000396551 E9PSI1 815 aa21.71■■□□□ 1.07
TRIM39-205ENST00000396551 KIF13AQ9H1H9 1805 aa21.71■■□□□ 1.07
TRIM39-205ENST00000396551 A2ML1A8K2U0 1454 aa21.7■■□□□ 1.07
TRIM39-205ENST00000396551 MINK1Q8N4C8 1332 aaPredicted RBP21.7■■□□□ 1.06
TRIM39-205ENST00000396551 NINLQ9Y2I6 1382 aa21.7■■□□□ 1.06
TRIM39-205ENST00000396551 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
TRIM39-205ENST00000396551 ABCC11Q96J66 1382 aa21.7■■□□□ 1.06
TRIM39-205ENST00000396551 SETD1AO15047 1707 aaKnown RBP21.69■■□□□ 1.06
TRIM39-205ENST00000396551 WWC1Q8IX03 1113 aa21.69■■□□□ 1.06
TRIM39-205ENST00000396551 CD163L1Q9NR16 1453 aa21.69■■□□□ 1.06
TRIM39-205ENST00000396551 ARHGEF40Q8TER5 1519 aa21.68■■□□□ 1.06
TRIM39-205ENST00000396551 RUNDC1Q96C34 613 aa21.68■■□□□ 1.06
TRIM39-205ENST00000396551 STAG3Q9UJ98 1225 aa21.68■■□□□ 1.06
TRIM39-205ENST00000396551 ANKRD26Q9UPS8 1709 aa21.67■■□□□ 1.06
TRIM39-205ENST00000396551 TCERG1O14776 1098 aaKnown RBP21.67■■□□□ 1.06
TRIM39-205ENST00000396551 POGKQ9P215 609 aa21.67■■□□□ 1.06
TRIM39-205ENST00000396551 ATAD2Q6PL18 1390 aa21.66■■□□□ 1.06
TRIM39-205ENST00000396551 MLECQ14165 292 aa21.66■■□□□ 1.06
TRIM39-205ENST00000396551 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.65■■□□□ 1.06
TRIM39-205ENST00000396551 CFAP53Q96M91 514 aa21.65■■□□□ 1.06
TRIM39-205ENST00000396551 BCAR3O75815 825 aa21.65■■□□□ 1.06
TRIM39-205ENST00000396551 RRP7AQ9Y3A4 280 aaKnown RBP21.65■■□□□ 1.06
TRIM39-205ENST00000396551 TCP11L2Q8N4U5 519 aa21.64■■□□□ 1.05
TRIM39-205ENST00000396551 RIMS2Q9UQ26 1411 aa21.64■■□□□ 1.05
TRIM39-205ENST00000396551 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
TRIM39-205ENST00000396551 NLRP1Q9C000 1473 aa21.63■■□□□ 1.05
TRIM39-205ENST00000396551 KDM2BQ8NHM5 1336 aa21.63■■□□□ 1.05
TRIM39-205ENST00000396551 NEUROD2Q15784 382 aa21.62■■□□□ 1.05
TRIM39-205ENST00000396551 SKAP1Q86WV1 359 aa21.62■■□□□ 1.05
TRIM39-205ENST00000396551 DLC1Q96QB1 1528 aa21.62■■□□□ 1.05
TRIM39-205ENST00000396551 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
TRIM39-205ENST00000396551 NRXN3Q9Y4C0 1643 aa21.61■■□□□ 1.05
TRIM39-205ENST00000396551 CDK19Q9BWU1 502 aa21.61■■□□□ 1.05
TRIM39-205ENST00000396551 ADGRB2O60241 1585 aa21.6■■□□□ 1.05
TRIM39-205ENST00000396551 COL3A1P02461 1466 aaPredicted RBP21.6■■□□□ 1.05
TRIM39-205ENST00000396551 MED14O60244 1454 aa21.6■■□□□ 1.05
TRIM39-205ENST00000396551 FYB1O15117 783 aa21.59■■□□□ 1.05
TRIM39-205ENST00000396551 TERF2IPQ9NYB0 399 aa21.59■■□□□ 1.05
TRIM39-205ENST00000396551 KIF20BQ96Q89 1820 aa21.59■■□□□ 1.05
TRIM39-205ENST00000396551 MS4A1P11836 297 aa21.59■■□□□ 1.05
TRIM39-205ENST00000396551 PDE4AP27815 886 aa21.57■■□□□ 1.04
TRIM39-205ENST00000396551 WAPLQ7Z5K2 1190 aa21.57■■□□□ 1.04
TRIM39-205ENST00000396551 U2AF1L5P0DN76 240 aaPredicted RBP21.56■■□□□ 1.04
TRIM39-205ENST00000396551 U2AF1Q01081 240 aaKnown RBP eCLIP21.56■■□□□ 1.04
TRIM39-205ENST00000396551 CCDC27Q2M243 656 aa21.56■■□□□ 1.04
TRIM39-205ENST00000396551 WDR63Q8IWG1 891 aa21.55■■□□□ 1.04
TRIM39-205ENST00000396551 BACH2Q9BYV9 841 aa21.55■■□□□ 1.04
TRIM39-205ENST00000396551 CABP1Q9NZU7 370 aa21.55■■□□□ 1.04
TRIM39-205ENST00000396551 ZMYM3Q14202 1370 aa21.54■■□□□ 1.04
TRIM39-205ENST00000396551 CENPQQ7L2Z9 268 aaPredicted RBP21.54■■□□□ 1.04
TRIM39-205ENST00000396551 ANP32AP39687 249 aaKnown RBP21.53■■□□□ 1.04
TRIM39-205ENST00000396551 HDGFL2Q7Z4V5 671 aaPredicted RBP21.53■■□□□ 1.04
TRIM39-205ENST00000396551 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
TRIM39-205ENST00000396551 NOP58Q9Y2X3 529 aaKnown RBP21.51■■□□□ 1.03
TRIM39-205ENST00000396551 PAK3O75914 559 aaPredicted RBP21.51■■□□□ 1.03
TRIM39-205ENST00000396551 PLEKHF1Q96S99 279 aa21.51■■□□□ 1.03
TRIM39-205ENST00000396551 METP08581 1390 aa21.5■■□□□ 1.03
TRIM39-205ENST00000396551 IPO9Q96P70 1041 aaKnown RBP21.5■■□□□ 1.03
TRIM39-205ENST00000396551 ATP7BP35670 1465 aa21.5■■□□□ 1.03
TRIM39-205ENST00000396551 RARSP54136 660 aaKnown RBP21.49■■□□□ 1.03
TRIM39-205ENST00000396551 PDE3AQ14432 1141 aa21.49■■□□□ 1.03
TRIM39-205ENST00000396551 KNDC1Q76NI1 1749 aa21.48■■□□□ 1.03
TRIM39-205ENST00000396551 U2SURPO15042 1029 aaKnown RBP21.48■■□□□ 1.03
TRIM39-205ENST00000396551 PNPLA6Q8IY17 1366 aa21.47■■□□□ 1.03
TRIM39-205ENST00000396551 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
TRIM39-205ENST00000396551 PANK1Q8TE04 598 aa21.46■■□□□ 1.03
TRIM39-205ENST00000396551 ESF1Q9H501 851 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms